RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 CSPP1Q1MSJ5 1256 aa6.88□□□□□ -1.31
RNU6-1040P-201ENST00000383974 RIC3Q7Z5B4 369 aa6.88□□□□□ -1.31
RNU6-1040P-201ENST00000383974 CABLES1Q8TDN4 633 aa6.88□□□□□ -1.31
RNU6-1040P-201ENST00000383974 MAP10Q9P2G4 905 aa6.88□□□□□ -1.31
RNU6-1040P-201ENST00000383974 WFS1O76024 890 aa6.87□□□□□ -1.31
RNU6-1040P-201ENST00000383974 PRPF38BQ5VTL8 546 aaKnown RBP6.87□□□□□ -1.31
RNU6-1040P-201ENST00000383974 SLC24A3Q9HC58 644 aa6.87□□□□□ -1.31
RNU6-1040P-201ENST00000383974 LIMD1Q9UGP4 676 aa6.87□□□□□ -1.31
RNU6-1040P-201ENST00000383974 F12P00748 615 aaPredicted RBP6.86□□□□□ -1.31
RNU6-1040P-201ENST00000383974 VARSP26640 1264 aaKnown RBP6.86□□□□□ -1.31
RNU6-1040P-201ENST00000383974 MYSM1Q5VVJ2 828 aa6.86□□□□□ -1.31
RNU6-1040P-201ENST00000383974 KIFC2Q96AC6 838 aa6.86□□□□□ -1.31
RNU6-1040P-201ENST00000383974 CAPN5O15484 640 aaPredicted RBP6.85□□□□□ -1.31
RNU6-1040P-201ENST00000383974 PER1O15534 1290 aaPredicted RBP6.85□□□□□ -1.31
RNU6-1040P-201ENST00000383974 QPCTQ16769 361 aa6.85□□□□□ -1.31
RNU6-1040P-201ENST00000383974 TRIM46Q7Z4K8 759 aa6.85□□□□□ -1.31
RNU6-1040P-201ENST00000383974 TSC1Q92574 1164 aa6.84□□□□□ -1.31
RNU6-1040P-201ENST00000383974 NNTQ13423 1086 aa6.83□□□□□ -1.32
RNU6-1040P-201ENST00000383974 LCE2CQ5TA81 110 aa6.83□□□□□ -1.32
RNU6-1040P-201ENST00000383974 MPNDQ8N594 471 aa6.83□□□□□ -1.32
RNU6-1040P-201ENST00000383974 FOXJ1Q92949 421 aa6.83□□□□□ -1.32
RNU6-1040P-201ENST00000383974 PLEKHG3A1L390 1219 aa6.82□□□□□ -1.32
RNU6-1040P-201ENST00000383974 NUTM2BA6NNL0 878 aaPredicted RBP6.82□□□□□ -1.32
RNU6-1040P-201ENST00000383974 NUTM2EB1AL46 878 aaPredicted RBP6.82□□□□□ -1.32
RNU6-1040P-201ENST00000383974 TERTO14746 1132 aaKnown RBP6.82□□□□□ -1.32
RNU6-1040P-201ENST00000383974 LILRB3O75022 631 aa6.82□□□□□ -1.32
RNU6-1040P-201ENST00000383974 TUSC1Q2TAM9 212 aa6.82□□□□□ -1.32
RNU6-1040P-201ENST00000383974 NUTM2DQ5VT03 806 aaPredicted RBP6.82□□□□□ -1.32
RNU6-1040P-201ENST00000383974 NUTM2AQ8IVF1 878 aaPredicted RBP6.82□□□□□ -1.32
RNU6-1040P-201ENST00000383974 FAM174AQ8TBP5 190 aa6.82□□□□□ -1.32
RNU6-1040P-201ENST00000383974 ADH1CP00326 375 aa6.8□□□□□ -1.32
RNU6-1040P-201ENST00000383974 CLK2P49760 499 aaKnown RBP6.8□□□□□ -1.32
RNU6-1040P-201ENST00000383974 C4orf48Q5BLP8 95 aa6.8□□□□□ -1.32
RNU6-1040P-201ENST00000383974 WIPF1O43516 503 aa6.79□□□□□ -1.32
RNU6-1040P-201ENST00000383974 TIMP2P16035 220 aa6.79□□□□□ -1.32
RNU6-1040P-201ENST00000383974 WDR4P57081 412 aaKnown RBP6.79□□□□□ -1.32
RNU6-1040P-201ENST00000383974 ARID5BQ14865 1188 aa6.79□□□□□ -1.32
RNU6-1040P-201ENST00000383974 AGERQ15109 404 aa6.79□□□□□ -1.32
RNU6-1040P-201ENST00000383974 RTL5Q5HYW3 569 aaPredicted RBP6.79□□□□□ -1.32
RNU6-1040P-201ENST00000383974 HELBQ8NG08 1087 aaPredicted RBP6.79□□□□□ -1.32
RNU6-1040P-201ENST00000383974 ZFP42Q96MM3 310 aa6.79□□□□□ -1.32
RNU6-1040P-201ENST00000383974 CDK15Q96Q40 435 aa6.79□□□□□ -1.32
RNU6-1040P-201ENST00000383974 POLR3EQ9NVU0 708 aa6.78□□□□□ -1.32
RNU6-1040P-201ENST00000383974 NR3C2P08235 984 aa6.77□□□□□ -1.33
RNU6-1040P-201ENST00000383974 MRPL14Q6P1L8 145 aaKnown RBP6.77□□□□□ -1.33
RNU6-1040P-201ENST00000383974 BPHLQ86WA6 291 aaPredicted RBP6.77□□□□□ -1.33
RNU6-1040P-201ENST00000383974 KLF16Q9BXK1 252 aaPredicted RBP6.77□□□□□ -1.33
RNU6-1040P-201ENST00000383974 NXF1Q9UBU9 619 aaKnown RBP6.77□□□□□ -1.33
RNU6-1040P-201ENST00000383974 NBPF14Q5TI25 921 aa6.76□□□□□ -1.33
RNU6-1040P-201ENST00000383974 SH3RF1Q7Z6J0 888 aa6.76□□□□□ -1.33
RNU6-1040P-201ENST00000383974 RSPH6AQ9H0K4 717 aa6.76□□□□□ -1.33
RNU6-1040P-201ENST00000383974 ZFAND3Q9H8U3 227 aa6.76□□□□□ -1.33
RNU6-1040P-201ENST00000383974 ZIC2O95409 532 aaPredicted RBP6.75□□□□□ -1.33
RNU6-1040P-201ENST00000383974 NR5A1Q13285 461 aa6.75□□□□□ -1.33
RNU6-1040P-201ENST00000383974 ARMC2Q8NEN0 867 aa6.75□□□□□ -1.33
RNU6-1040P-201ENST00000383974 ITPKCQ96DU7 683 aa6.75□□□□□ -1.33
RNU6-1040P-201ENST00000383974 PURBQ96QR8 312 aaKnown RBP6.75□□□□□ -1.33
RNU6-1040P-201ENST00000383974 C1QTNF2Q9BXJ5 285 aa6.75□□□□□ -1.33
RNU6-1040P-201ENST00000383974 GRM5P41594 1212 aa6.74□□□□□ -1.33
RNU6-1040P-201ENST00000383974 VEGFBP49765 207 aa6.74□□□□□ -1.33
RNU6-1040P-201ENST00000383974 SCARF1Q14162 830 aa6.74□□□□□ -1.33
RNU6-1040P-201ENST00000383974 SH3BP5LQ7L8J4 393 aa6.74□□□□□ -1.33
RNU6-1040P-201ENST00000383974 MAGEB6P1A0A0J9YX57 407 aa6.73□□□□□ -1.33
RNU6-1040P-201ENST00000383974 SOBPA7XYQ1 873 aa6.73□□□□□ -1.33
RNU6-1040P-201ENST00000383974 FSHRP23945 695 aa6.73□□□□□ -1.33
RNU6-1040P-201ENST00000383974 INSM1Q01101 510 aaPredicted RBP6.73□□□□□ -1.33
RNU6-1040P-201ENST00000383974 CTDSPL2Q05D32 466 aa6.73□□□□□ -1.33
RNU6-1040P-201ENST00000383974 SLC16A10Q8TF71 515 aa6.73□□□□□ -1.33
RNU6-1040P-201ENST00000383974 GPBP1L1Q9HC44 474 aaPredicted RBP6.73□□□□□ -1.33
RNU6-1040P-201ENST00000383974 H3BM21 787 aa6.72□□□□□ -1.33
RNU6-1040P-201ENST00000383974 FBXO31Q5XUX0 539 aaPredicted RBP6.72□□□□□ -1.33
RNU6-1040P-201ENST00000383974 NPAS3Q8IXF0 933 aa6.72□□□□□ -1.33
RNU6-1040P-201ENST00000383974 CARD14Q9BXL6 1004 aa6.72□□□□□ -1.33
RNU6-1040P-201ENST00000383974 KDM4CQ9H3R0 1056 aa6.72□□□□□ -1.33
RNU6-1040P-201ENST00000383974 STK17AQ9UEE5 414 aa6.72□□□□□ -1.33
RNU6-1040P-201ENST00000383974 MAP4K5Q9Y4K4 846 aa6.72□□□□□ -1.33
RNU6-1040P-201ENST00000383974 C6orf118Q5T5N4 469 aa6.71□□□□□ -1.34
RNU6-1040P-201ENST00000383974 VASH1Q7L8A9 365 aaPredicted RBP6.71□□□□□ -1.34
RNU6-1040P-201ENST00000383974 TRMT44Q8IYL2 757 aaKnown RBP6.71□□□□□ -1.34
RNU6-1040P-201ENST00000383974 LRRN4Q8WUT4 740 aa6.71□□□□□ -1.34
RNU6-1040P-201ENST00000383974 IRF7Q92985 503 aa6.71□□□□□ -1.34
RNU6-1040P-201ENST00000383974 GMPRP36959 345 aa6.7□□□□□ -1.34
RNU6-1040P-201ENST00000383974 SKIV2LQ15477 1246 aaKnown RBP6.7□□□□□ -1.34
RNU6-1040P-201ENST00000383974 ERFEQ4G0M1 354 aa6.7□□□□□ -1.34
RNU6-1040P-201ENST00000383974 SH3D19Q5HYK7 790 aa6.7□□□□□ -1.34
RNU6-1040P-201ENST00000383974 MEIOBQ8N635 442 aa6.7□□□□□ -1.34
RNU6-1040P-201ENST00000383974 GPKOWQ92917 476 aaPredicted RBP eCLIP6.7□□□□□ -1.34
RNU6-1040P-201ENST00000383974 FAM117AQ9C073 453 aa6.7□□□□□ -1.34
RNU6-1040P-201ENST00000383974 ERBB4Q15303 1308 aa6.7□□□□□ -1.34
RNU6-1040P-201ENST00000383974 LINC00528Q8N1L1 170 aa6.69□□□□□ -1.34
RNU6-1040P-201ENST00000383974 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.69□□□□□ -1.34
RNU6-1040P-201ENST00000383974 BMP2P12643 396 aa6.68□□□□□ -1.34
RNU6-1040P-201ENST00000383974 NR6A1Q15406 480 aa6.68□□□□□ -1.34
RNU6-1040P-201ENST00000383974 CCDC116Q8IYX3 515 aa6.68□□□□□ -1.34
RNU6-1040P-201ENST00000383974 PROCA1Q8NCQ7 364 aaPredicted RBP6.68□□□□□ -1.34
RNU6-1040P-201ENST00000383974 DDRGK1Q96HY6 314 aa6.68□□□□□ -1.34
RNU6-1040P-201ENST00000383974 FKBPLQ9UIM3 349 aa6.68□□□□□ -1.34
RNU6-1040P-201ENST00000383974 MAN1A2O60476 641 aa6.67□□□□□ -1.34
RNU6-1040P-201ENST00000383974 UPP2O95045 317 aa6.67□□□□□ -1.34
RNU6-1040P-201ENST00000383974 PDXDC2PQ6P474 469 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms