RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 PMFBP1Q8TBY8 1022 aa27.03■■□□□ 1.92
CPNE9-202ENST00000383831 ZRANB1Q9UGI0 708 aa27.03■■□□□ 1.92
CPNE9-202ENST00000383831 SMG6Q86US8 1419 aaKnown RBP27.03■■□□□ 1.92
CPNE9-202ENST00000383831 TTC21BQ7Z4L5 1316 aa27.02■■□□□ 1.92
CPNE9-202ENST00000383831 SSH2Q76I76 1423 aa27.01■■□□□ 1.91
CPNE9-202ENST00000383831 COL3A1P02461 1466 aaPredicted RBP27■■□□□ 1.91
CPNE9-202ENST00000383831 CCDC146Q8IYE0 955 aa26.99■■□□□ 1.91
CPNE9-202ENST00000383831 NGDNQ8NEJ9 315 aaKnown RBP26.98■■□□□ 1.91
CPNE9-202ENST00000383831 COG3Q96JB2 828 aa26.98■■□□□ 1.91
CPNE9-202ENST00000383831 NUDCQ9Y266 331 aa26.97■■□□□ 1.91
CPNE9-202ENST00000383831 FBLN1P23142 703 aa26.96■■□□□ 1.91
CPNE9-202ENST00000383831 MAP2P11137 1827 aaKnown RBP26.95■■□□□ 1.91
CPNE9-202ENST00000383831 PROSER2Q86WR7 435 aaPredicted RBP26.95■■□□□ 1.9
CPNE9-202ENST00000383831 POLKQ9UBT6 870 aa26.95■■□□□ 1.9
CPNE9-202ENST00000383831 PNPLA6Q8IY17 1366 aa26.95■■□□□ 1.9
CPNE9-202ENST00000383831 STRCP1A6NGW2 1772 aa26.95■■□□□ 1.9
CPNE9-202ENST00000383831 C14orf37Q86TY3 774 aa26.94■■□□□ 1.9
CPNE9-202ENST00000383831 AATKQ6ZMQ8 1374 aa26.94■■□□□ 1.9
CPNE9-202ENST00000383831 SUPT16HQ9Y5B9 1047 aaKnown RBP26.94■■□□□ 1.9
CPNE9-202ENST00000383831 OVOS2A0A0J9YW53 1432 aa26.94■■□□□ 1.9
CPNE9-202ENST00000383831 OVOS2Q6IE36 1432 aa26.94■■□□□ 1.9
CPNE9-202ENST00000383831 PDE3BQ13370 1112 aa26.93■■□□□ 1.9
CPNE9-202ENST00000383831 STRCQ7RTU9 1775 aa26.93■■□□□ 1.9
CPNE9-202ENST00000383831 TTC21AQ8NDW8 1320 aa26.92■■□□□ 1.9
CPNE9-202ENST00000383831 APAF1O14727 1248 aa26.9■■□□□ 1.9
CPNE9-202ENST00000383831 PHF8Q9UPP1 1060 aa26.89■■□□□ 1.9
CPNE9-202ENST00000383831 EMILIN1Q9Y6C2 1016 aa26.89■■□□□ 1.89
CPNE9-202ENST00000383831 U2AF1L5P0DN76 240 aaPredicted RBP26.88■■□□□ 1.89
CPNE9-202ENST00000383831 U2AF1Q01081 240 aaKnown RBP eCLIP26.88■■□□□ 1.89
CPNE9-202ENST00000383831 PIK3C2AO00443 1686 aa26.87■■□□□ 1.89
CPNE9-202ENST00000383831 PPM1GO15355 546 aaPredicted RBP26.87■■□□□ 1.89
CPNE9-202ENST00000383831 CDCA7LQ96GN5 454 aa26.87■■□□□ 1.89
CPNE9-202ENST00000383831 ZNF521Q96K83 1311 aa26.87■■□□□ 1.89
CPNE9-202ENST00000383831 CDK12Q9NYV4 1490 aaPredicted RBP26.87■■□□□ 1.89
CPNE9-202ENST00000383831 DIAPH1O60610 1272 aaKnown RBP26.86■■□□□ 1.89
CPNE9-202ENST00000383831 RUNDC1Q96C34 613 aa26.86■■□□□ 1.89
CPNE9-202ENST00000383831 NEFLP07196 543 aa26.86■■□□□ 1.89
CPNE9-202ENST00000383831 IQSEC2Q5JU85 1478 aa26.85■■□□□ 1.89
CPNE9-202ENST00000383831 FKBP8Q14318 412 aa26.85■■□□□ 1.89
CPNE9-202ENST00000383831 U2SURPO15042 1029 aaKnown RBP26.84■■□□□ 1.89
CPNE9-202ENST00000383831 RRS1Q15050 365 aaKnown RBP26.84■■□□□ 1.89
CPNE9-202ENST00000383831 TMEM94Q12767 1356 aa26.84■■□□□ 1.89
CPNE9-202ENST00000383831 USP31Q70CQ4 1352 aa26.84■■□□□ 1.89
CPNE9-202ENST00000383831 ESCO1Q5FWF5 840 aa26.84■■□□□ 1.89
CPNE9-202ENST00000383831 C19orf44Q9H6X5 657 aa26.83■■□□□ 1.89
CPNE9-202ENST00000383831 NGEFQ8N5V2 710 aa26.81■■□□□ 1.88
CPNE9-202ENST00000383831 NCOA3Q9Y6Q9 1424 aa26.81■■□□□ 1.88
CPNE9-202ENST00000383831 USP54Q70EL1 1684 aa26.8■■□□□ 1.88
CPNE9-202ENST00000383831 MARF1Q9Y4F3 1742 aaKnown RBP26.79■■□□□ 1.88
CPNE9-202ENST00000383831 TCP11L2Q8N4U5 519 aa26.79■■□□□ 1.88
CPNE9-202ENST00000383831 ORAI2Q96SN7 254 aa26.79■■□□□ 1.88
CPNE9-202ENST00000383831 C1orf167Q5SNV9 1468 aa26.77■■□□□ 1.88
CPNE9-202ENST00000383831 GOLGA2Q08379 1002 aa26.76■■□□□ 1.88
CPNE9-202ENST00000383831 PLEKHF1Q96S99 279 aa26.76■■□□□ 1.88
CPNE9-202ENST00000383831 PEAK1Q9H792 1746 aa26.76■■□□□ 1.88
CPNE9-202ENST00000383831 DCCP43146 1447 aa26.76■■□□□ 1.87
CPNE9-202ENST00000383831 IL13P35225 146 aa26.76■■□□□ 1.87
CPNE9-202ENST00000383831 PAK3O75914 559 aaPredicted RBP26.75■■□□□ 1.87
CPNE9-202ENST00000383831 NLRP6P59044 892 aa26.75■■□□□ 1.87
CPNE9-202ENST00000383831 RRP7AQ9Y3A4 280 aaKnown RBP26.75■■□□□ 1.87
CPNE9-202ENST00000383831 KIF1AQ12756 1690 aa26.74■■□□□ 1.87
CPNE9-202ENST00000383831 LRRC7Q96NW7 1537 aa26.74■■□□□ 1.87
CPNE9-202ENST00000383831 SOX12O15370 315 aa26.74■■□□□ 1.87
CPNE9-202ENST00000383831 PSME1Q06323 249 aa26.74■■□□□ 1.87
CPNE9-202ENST00000383831 ABTB2Q8N961 1025 aa26.74■■□□□ 1.87
CPNE9-202ENST00000383831 XIRP1Q702N8 1843 aaKnown RBP26.73■■□□□ 1.87
CPNE9-202ENST00000383831 MST1RQ04912 1400 aa26.73■■□□□ 1.87
CPNE9-202ENST00000383831 ATF3P18847 181 aa26.72■■□□□ 1.87
CPNE9-202ENST00000383831 NEUROD2Q15784 382 aa26.72■■□□□ 1.87
CPNE9-202ENST00000383831 NUTM2GQ5VZR2 741 aa26.72■■□□□ 1.87
CPNE9-202ENST00000383831 WWC1Q8IX03 1113 aa26.72■■□□□ 1.87
CPNE9-202ENST00000383831 IRX6P78412 446 aaPredicted RBP26.71■■□□□ 1.87
CPNE9-202ENST00000383831 RNF123Q5XPI4 1314 aa26.71■■□□□ 1.87
CPNE9-202ENST00000383831 SLFN5Q08AF3 891 aa26.71■■□□□ 1.87
CPNE9-202ENST00000383831 DUSP27Q5VZP5 1158 aa26.71■■□□□ 1.87
CPNE9-202ENST00000383831 PHF23Q9BUL5 403 aaPredicted RBP26.71■■□□□ 1.87
CPNE9-202ENST00000383831 FCHSD2O94868 740 aa26.7■■□□□ 1.86
CPNE9-202ENST00000383831 MAP3K19Q56UN5 1328 aa26.69■■□□□ 1.86
CPNE9-202ENST00000383831 FOXO3O43524 673 aa26.69■■□□□ 1.86
CPNE9-202ENST00000383831 PNNQ9H307 717 aaKnown RBP26.69■■□□□ 1.86
CPNE9-202ENST00000383831 DMRT2Q9Y5R5 561 aa26.69■■□□□ 1.86
CPNE9-202ENST00000383831 ZNF335Q9H4Z2 1342 aaPredicted RBP26.69■■□□□ 1.86
CPNE9-202ENST00000383831 NCBP3Q53F19 620 aaKnown RBP26.69■■□□□ 1.86
CPNE9-202ENST00000383831 RSPH6AQ9H0K4 717 aa26.69■■□□□ 1.86
CPNE9-202ENST00000383831 SPINK5Q9NQ38 1064 aaPredicted RBP26.69■■□□□ 1.86
CPNE9-202ENST00000383831 MAPK8IP3Q9UPT6 1336 aa26.68■■□□□ 1.86
CPNE9-202ENST00000383831 CCDC27Q2M243 656 aa26.68■■□□□ 1.86
CPNE9-202ENST00000383831 TRMT2AQ8IZ69 625 aaKnown RBP26.68■■□□□ 1.86
CPNE9-202ENST00000383831 RCAN3Q9UKA8 241 aa26.68■■□□□ 1.86
CPNE9-202ENST00000383831 MSH6P52701 1360 aa26.67■■□□□ 1.86
CPNE9-202ENST00000383831 SBNO1A3KN83 1393 aa26.66■■□□□ 1.86
CPNE9-202ENST00000383831 TRPM3Q9HCF6 1732 aaPredicted RBP26.66■■□□□ 1.86
CPNE9-202ENST00000383831 HMOX1P09601 288 aa26.66■■□□□ 1.86
CPNE9-202ENST00000383831 XPCQ01831 940 aaPredicted RBP26.66■■□□□ 1.86
CPNE9-202ENST00000383831 EIF4A2Q14240 407 aaKnown RBP26.66■■□□□ 1.86
CPNE9-202ENST00000383831 CADPS2Q86UW7 1296 aa26.66■■□□□ 1.86
CPNE9-202ENST00000383831 E9PSI1 815 aa26.65■■□□□ 1.86
CPNE9-202ENST00000383831 PRKAR2BP31323 418 aa26.65■■□□□ 1.86
CPNE9-202ENST00000383831 HSP90AB2PQ58FF8 381 aa26.65■■□□□ 1.86
CPNE9-202ENST00000383831 FLT4P35916 1363 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms