RNA–Protein interactions for RNA: ENST00000381346.8

RDH11-201, Transcript of retinol dehydrogenase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDH11, Length 2,588 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-201ENST00000381346 PPP1R9BQ96SB3 815 aa11.45□□□□□ -0.58
RDH11-201ENST00000381346 R3HCC1Q9Y3T6 440 aaKnown RBP11.45□□□□□ -0.58
RDH11-201ENST00000381346 ANP32BQ92688 251 aaKnown RBP11.44□□□□□ -0.58
RDH11-201ENST00000381346 CCDC94Q9BW85 323 aaPredicted RBP11.44□□□□□ -0.58
RDH11-201ENST00000381346 TBC1D2Q9BYX2 928 aa11.44□□□□□ -0.58
RDH11-201ENST00000381346 NEXMIFQ5QGS0 1516 aa11.44□□□□□ -0.58
RDH11-201ENST00000381346 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.44□□□□□ -0.58
RDH11-201ENST00000381346 PRDM10Q9NQV6 1147 aa11.44□□□□□ -0.58
RDH11-201ENST00000381346 REREQ9P2R6 1566 aa11.44□□□□□ -0.58
RDH11-201ENST00000381346 ZSCAN20P17040 1043 aaPredicted RBP11.43□□□□□ -0.58
RDH11-201ENST00000381346 UQCRHLA0A096LP55 91 aa11.43□□□□□ -0.58
RDH11-201ENST00000381346 UQCRHP07919 91 aa11.43□□□□□ -0.58
RDH11-201ENST00000381346 PREX1Q8TCU6 1659 aa11.43□□□□□ -0.58
RDH11-201ENST00000381346 BLMP54132 1417 aaPredicted RBP11.43□□□□□ -0.58
RDH11-201ENST00000381346 SLC52A1Q9NWF4 448 aa11.42□□□□□ -0.58
RDH11-201ENST00000381346 TSPOAP1O95153 1857 aa11.42□□□□□ -0.58
RDH11-201ENST00000381346 LETM1O95202 739 aaPredicted RBP11.42□□□□□ -0.58
RDH11-201ENST00000381346 MAPK8IP3Q9UPT6 1336 aa11.42□□□□□ -0.58
RDH11-201ENST00000381346 HS1BP3Q53T59 392 aa11.41□□□□□ -0.58
RDH11-201ENST00000381346 TAF3Q5VWG9 929 aa11.41□□□□□ -0.58
RDH11-201ENST00000381346 QRICH2Q9H0J4 1663 aa11.41□□□□□ -0.58
RDH11-201ENST00000381346 ZFYVE9O95405 1425 aa11.41□□□□□ -0.58
RDH11-201ENST00000381346 VGFO15240 615 aaPredicted RBP11.41□□□□□ -0.58
RDH11-201ENST00000381346 SEC24BO95487 1268 aa11.41□□□□□ -0.58
RDH11-201ENST00000381346 SKOR2Q2VWA4 1001 aaPredicted RBP11.41□□□□□ -0.58
RDH11-201ENST00000381346 TMEM51Q9NW97 253 aa11.41□□□□□ -0.58
RDH11-201ENST00000381346 AGLP35573 1532 aa11.41□□□□□ -0.58
RDH11-201ENST00000381346 PTMSP20962 102 aa11.4□□□□□ -0.58
RDH11-201ENST00000381346 CSPP1Q1MSJ5 1256 aa11.4□□□□□ -0.58
RDH11-201ENST00000381346 PPP2R1AP30153 589 aa11.4□□□□□ -0.58
RDH11-201ENST00000381346 IDI1Q13907 227 aa11.4□□□□□ -0.58
RDH11-201ENST00000381346 TBC1D32Q96NH3 1257 aa11.4□□□□□ -0.58
RDH11-201ENST00000381346 VIRMAQ69YN4 1812 aaKnown RBP11.4□□□□□ -0.58
RDH11-201ENST00000381346 TMEM131LA2VDJ0 1609 aa11.39□□□□□ -0.59
RDH11-201ENST00000381346 ZNF500O60304 480 aaPredicted RBP11.39□□□□□ -0.59
RDH11-201ENST00000381346 GAS2L3Q86XJ1 694 aa11.39□□□□□ -0.59
RDH11-201ENST00000381346 NLRP1Q9C000 1473 aa11.39□□□□□ -0.59
RDH11-201ENST00000381346 MYO5BQ9ULV0 1848 aa11.38□□□□□ -0.59
RDH11-201ENST00000381346 PPP6R1Q9UPN7 881 aa11.38□□□□□ -0.59
RDH11-201ENST00000381346 TRAK1Q9UPV9 953 aa11.38□□□□□ -0.59
RDH11-201ENST00000381346 ARHGEF28Q8N1W1 1705 aaKnown RBP11.38□□□□□ -0.59
RDH11-201ENST00000381346 NASPP49321 788 aaPredicted RBP11.37□□□□□ -0.59
RDH11-201ENST00000381346 TMEM132EQ6IEE7 984 aa11.37□□□□□ -0.59
RDH11-201ENST00000381346 ARID3AQ99856 593 aa11.37□□□□□ -0.59
RDH11-201ENST00000381346 NOL7Q9UMY1 257 aaKnown RBP11.36□□□□□ -0.59
RDH11-201ENST00000381346 SASS6Q6UVJ0 657 aa11.36□□□□□ -0.59
RDH11-201ENST00000381346 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
RDH11-201ENST00000381346 PUS7Q96PZ0 661 aaKnown RBP11.35□□□□□ -0.59
RDH11-201ENST00000381346 CARD14Q9BXL6 1004 aa11.35□□□□□ -0.59
RDH11-201ENST00000381346 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
RDH11-201ENST00000381346 GBP4Q96PP9 640 aa11.34□□□□□ -0.59
RDH11-201ENST00000381346 ADAMTS8Q9UP79 889 aa11.34□□□□□ -0.59
RDH11-201ENST00000381346 MCM5P33992 734 aa11.34□□□□□ -0.59
RDH11-201ENST00000381346 ARHGEF40Q8TER5 1519 aa11.33□□□□□ -0.59
RDH11-201ENST00000381346 WDR43Q15061 677 aaKnown RBP eCLIP11.33□□□□□ -0.6
RDH11-201ENST00000381346 NUTM2DQ5VT03 806 aaPredicted RBP11.33□□□□□ -0.6
RDH11-201ENST00000381346 USP32Q8NFA0 1604 aa11.33□□□□□ -0.6
RDH11-201ENST00000381346 ZMYM3Q14202 1370 aa11.33□□□□□ -0.6
RDH11-201ENST00000381346 CLTCQ00610 1675 aaKnown RBP11.33□□□□□ -0.6
RDH11-201ENST00000381346 FTSJ3Q8IY81 847 aaKnown RBP11.33□□□□□ -0.6
RDH11-201ENST00000381346 TULP4Q9NRJ4 1543 aa11.33□□□□□ -0.6
RDH11-201ENST00000381346 ZNF830Q96NB3 372 aaPredicted RBP11.32□□□□□ -0.6
RDH11-201ENST00000381346 SPATA31D1Q6ZQQ2 1576 aa11.32□□□□□ -0.6
RDH11-201ENST00000381346 FBXO31Q5XUX0 539 aaPredicted RBP11.32□□□□□ -0.6
RDH11-201ENST00000381346 EVC2Q86UK5 1308 aa11.32□□□□□ -0.6
RDH11-201ENST00000381346 NSD3Q9BZ95 1437 aa11.31□□□□□ -0.6
RDH11-201ENST00000381346 CDK11BP21127 795 aaKnown RBP11.31□□□□□ -0.6
RDH11-201ENST00000381346 IGHDP01880 384 aa11.31□□□□□ -0.6
RDH11-201ENST00000381346 XPCQ01831 940 aaPredicted RBP11.31□□□□□ -0.6
RDH11-201ENST00000381346 CIZ1Q9ULV3 898 aaPredicted RBP11.3□□□□□ -0.6
RDH11-201ENST00000381346 IBTKQ9P2D0 1353 aaPredicted RBP11.3□□□□□ -0.6
RDH11-201ENST00000381346 HSCBQ8IWL3 235 aa11.3□□□□□ -0.6
RDH11-201ENST00000381346 ZNF692Q9BU19 519 aaPredicted RBP11.3□□□□□ -0.6
RDH11-201ENST00000381346 SLC12A5Q9H2X9 1139 aa11.3□□□□□ -0.6
RDH11-201ENST00000381346 PTPRMP28827 1452 aa11.3□□□□□ -0.6
RDH11-201ENST00000381346 DUSP27Q5VZP5 1158 aa11.29□□□□□ -0.6
RDH11-201ENST00000381346 CBX1P83916 185 aa11.29□□□□□ -0.6
RDH11-201ENST00000381346 ZKSCAN5Q9Y2L8 839 aa11.29□□□□□ -0.6
RDH11-201ENST00000381346 ALKQ9UM73 1620 aa11.29□□□□□ -0.6
RDH11-201ENST00000381346 POLR3AO14802 1390 aaPredicted RBP11.29□□□□□ -0.6
RDH11-201ENST00000381346 VGLL3A8MV65 326 aa11.28□□□□□ -0.6
RDH11-201ENST00000381346 TNPO1Q92973 898 aaKnown RBP11.28□□□□□ -0.6
RDH11-201ENST00000381346 ANKRD36BQ8N2N9 1353 aa11.28□□□□□ -0.6
RDH11-201ENST00000381346 NINLQ9Y2I6 1382 aa11.28□□□□□ -0.6
RDH11-201ENST00000381346 YTHDC2Q9H6S0 1430 aaKnown RBP11.28□□□□□ -0.6
RDH11-201ENST00000381346 A2ML1A8K2U0 1454 aa11.28□□□□□ -0.6
RDH11-201ENST00000381346 ZNF521Q96K83 1311 aa11.28□□□□□ -0.6
RDH11-201ENST00000381346 PLEKHH1Q9ULM0 1364 aa11.28□□□□□ -0.6
RDH11-201ENST00000381346 DNTTIP2Q5QJE6 756 aaKnown RBP11.27□□□□□ -0.6
RDH11-201ENST00000381346 PLCD3Q8N3E9 789 aa11.27□□□□□ -0.6
RDH11-201ENST00000381346 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.27□□□□□ -0.6
RDH11-201ENST00000381346 CGNL1Q0VF96 1302 aa11.27□□□□□ -0.6
RDH11-201ENST00000381346 DDIT3P35638 169 aa11.27□□□□□ -0.61
RDH11-201ENST00000381346 MYRIPQ8NFW9 859 aa11.27□□□□□ -0.61
RDH11-201ENST00000381346 C22orf23Q9BZE7 217 aa11.27□□□□□ -0.61
RDH11-201ENST00000381346 NSD2O96028 1365 aa11.27□□□□□ -0.61
RDH11-201ENST00000381346 PDLIM2Q96JY6 352 aa11.26□□□□□ -0.61
RDH11-201ENST00000381346 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
RDH11-201ENST00000381346 GOLGA6L22H0YM25 854 aa11.26□□□□□ -0.61
RDH11-201ENST00000381346 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms