RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 KDM5CP41229 1560 aa5.89□□□□□ -1.47
PTPRD-203ENST00000381196 TROQ12816 1431 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-203ENST00000381196 GOLGA6L9A6NEM1 432 aa5.88□□□□□ -1.47
PTPRD-203ENST00000381196 ERLIN1O75477 346 aa5.88□□□□□ -1.47
PTPRD-203ENST00000381196 GABPB1Q06547 395 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-203ENST00000381196 DDX19BQ9UMR2 479 aa5.88□□□□□ -1.47
PTPRD-203ENST00000381196 NASPP49321 788 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-203ENST00000381196 UVSSAQ2YD98 709 aa5.88□□□□□ -1.47
PTPRD-203ENST00000381196 UTP14CQ5TAP6 766 aaKnown RBP5.88□□□□□ -1.47
PTPRD-203ENST00000381196 VSIG10Q8N0Z9 540 aa5.88□□□□□ -1.47
PTPRD-203ENST00000381196 E9PCH4 1651 aa5.88□□□□□ -1.47
PTPRD-203ENST00000381196 GPRASP1Q5JY77 1395 aa5.88□□□□□ -1.47
PTPRD-203ENST00000381196 CACNA1FO60840 1977 aa5.88□□□□□ -1.47
PTPRD-203ENST00000381196 SETSIPP0DME0 302 aa5.88□□□□□ -1.47
PTPRD-203ENST00000381196 HSP90B2PQ58FF3 399 aa5.88□□□□□ -1.47
PTPRD-203ENST00000381196 SASS6Q6UVJ0 657 aa5.88□□□□□ -1.47
PTPRD-203ENST00000381196 KIF1BO60333 1816 aa5.88□□□□□ -1.47
PTPRD-203ENST00000381196 PLCB2Q00722 1185 aa5.88□□□□□ -1.47
PTPRD-203ENST00000381196 HIRIP3Q9BW71 556 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-203ENST00000381196 DEF6Q9H4E7 631 aa5.88□□□□□ -1.47
PTPRD-203ENST00000381196 GOLGA6L7A0A1B0GV03 622 aa5.87□□□□□ -1.47
PTPRD-203ENST00000381196 SSR1P43307 286 aaKnown RBP5.87□□□□□ -1.47
PTPRD-203ENST00000381196 TTC5Q8N0Z6 440 aa5.87□□□□□ -1.47
PTPRD-203ENST00000381196 KIAA1210Q9ULL0 1709 aa5.87□□□□□ -1.47
PTPRD-203ENST00000381196 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTPRD-203ENST00000381196 ZNF526Q8TF50 670 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-203ENST00000381196 HSP90B1P14625 803 aaKnown RBP5.87□□□□□ -1.47
PTPRD-203ENST00000381196 C1orf141Q5JVX7 400 aa5.87□□□□□ -1.47
PTPRD-203ENST00000381196 CLGNO14967 610 aa5.87□□□□□ -1.47
PTPRD-203ENST00000381196 NEFHP12036 1026 aa5.87□□□□□ -1.47
PTPRD-203ENST00000381196 CEP89Q96ST8 783 aa5.87□□□□□ -1.47
PTPRD-203ENST00000381196 CLASP1Q7Z460 1538 aa5.87□□□□□ -1.47
PTPRD-203ENST00000381196 SYNMO15061 1565 aa5.87□□□□□ -1.47
PTPRD-203ENST00000381196 SYNJ2O15056 1496 aa5.87□□□□□ -1.47
PTPRD-203ENST00000381196 SRRTQ9BXP5 876 aaKnown RBP5.87□□□□□ -1.47
PTPRD-203ENST00000381196 UNC13BO14795 1591 aa5.87□□□□□ -1.47
PTPRD-203ENST00000381196 DRC7Q8IY82 874 aa5.87□□□□□ -1.47
PTPRD-203ENST00000381196 ESPNB1AK53 854 aa5.87□□□□□ -1.47
PTPRD-203ENST00000381196 HOMEZQ8IX15 550 aa5.87□□□□□ -1.47
PTPRD-203ENST00000381196 PPP1R1BQ9UD71 204 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-203ENST00000381196 PPP6R1Q9UPN7 881 aa5.87□□□□□ -1.47
PTPRD-203ENST00000381196 C9orf84Q5VXU9 1444 aa5.86□□□□□ -1.47
PTPRD-203ENST00000381196 TARBP1Q13395 1621 aaKnown RBP5.86□□□□□ -1.47
PTPRD-203ENST00000381196 PSME1Q06323 249 aa5.86□□□□□ -1.47
PTPRD-203ENST00000381196 NKTRP30414 1462 aaKnown RBP5.86□□□□□ -1.47
PTPRD-203ENST00000381196 MYO1BO43795 1136 aa5.86□□□□□ -1.47
PTPRD-203ENST00000381196 U2AF1L5P0DN76 240 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-203ENST00000381196 U2AF1Q01081 240 aaKnown RBP eCLIP5.86□□□□□ -1.47
PTPRD-203ENST00000381196 VPS53Q5VIR6 699 aa5.86□□□□□ -1.47
PTPRD-203ENST00000381196 BACH2Q9BYV9 841 aa5.86□□□□□ -1.47
PTPRD-203ENST00000381196 SARNPP82979 210 aaKnown RBP5.86□□□□□ -1.47
PTPRD-203ENST00000381196 LEKR1Q6ZMV7 388 aa5.86□□□□□ -1.47
PTPRD-203ENST00000381196 CEP170Q5SW79 1584 aa5.86□□□□□ -1.47
PTPRD-203ENST00000381196 NBPF1Q3BBV0 1214 aa5.86□□□□□ -1.47
PTPRD-203ENST00000381196 ZNF771Q7L3S4 317 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-203ENST00000381196 PAXBP1Q9Y5B6 917 aa5.86□□□□□ -1.47
PTPRD-203ENST00000381196 GOLGA6L10A0A0M3HER8 536 aa5.86□□□□□ -1.47
PTPRD-203ENST00000381196 IRX6P78412 446 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-203ENST00000381196 SYCP1Q15431 976 aa5.86□□□□□ -1.47
PTPRD-203ENST00000381196 PREX2Q70Z35 1606 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 TUBB2AQ13885 445 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 TUBB2BQ9BVA1 445 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 EIF4G3O43432 1585 aaKnown RBP5.85□□□□□ -1.47
PTPRD-203ENST00000381196 MPHOSPH9Q99550 1183 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 NPC1L1Q9UHC9 1359 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 EPB41L2O43491 1005 aaKnown RBP5.85□□□□□ -1.47
PTPRD-203ENST00000381196 RDXP35241 583 aaKnown RBP5.85□□□□□ -1.47
PTPRD-203ENST00000381196 NFKBIBQ15653 356 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 TPRNQ4KMQ1 711 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 FBXW7Q969H0 707 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 ABCC2Q92887 1545 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 ADGRL1O94910 1474 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 CEP152O94986 1710 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 KIAA1211Q6ZU35 1233 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 PROSER2Q86WR7 435 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-203ENST00000381196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.85□□□□□ -1.47
PTPRD-203ENST00000381196 IQGAP3Q86VI3 1631 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 HNRNPMP52272 730 aaKnown RBP eCLIP5.85□□□□□ -1.47
PTPRD-203ENST00000381196 DNAAF4Q8WXU2 420 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 TCEAL9Q9UHQ7 104 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 CDC42BPAQ5VT25 1732 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 APPP05067 770 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 LUZP1Q86V48 1076 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 CNKSR2Q8WXI2 1034 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 USP25Q9UHP3 1055 aa5.85□□□□□ -1.47
PTPRD-203ENST00000381196 CCDC38Q502W7 563 aa5.84□□□□□ -1.47
PTPRD-203ENST00000381196 POGZQ7Z3K3 1410 aa5.84□□□□□ -1.47
PTPRD-203ENST00000381196 SPATS2Q86XZ4 545 aaKnown RBP5.84□□□□□ -1.47
PTPRD-203ENST00000381196 ANKRD50Q9ULJ7 1429 aa5.84□□□□□ -1.47
PTPRD-203ENST00000381196 ERBINQ96RT1 1412 aa5.84□□□□□ -1.47
PTPRD-203ENST00000381196 HMGB2P26583 209 aaKnown RBP5.84□□□□□ -1.47
PTPRD-203ENST00000381196 GTF2F1P35269 517 aaKnown RBP eCLIP5.84□□□□□ -1.47
PTPRD-203ENST00000381196 ANKRD20A12PQ8NF67 263 aa5.84□□□□□ -1.47
PTPRD-203ENST00000381196 COG3Q96JB2 828 aa5.84□□□□□ -1.47
PTPRD-203ENST00000381196 PIP4K2BP78356 416 aa5.84□□□□□ -1.47
PTPRD-203ENST00000381196 RPAINQ86UA6 219 aa5.84□□□□□ -1.47
PTPRD-203ENST00000381196 TOMM22Q9NS69 142 aa5.84□□□□□ -1.47
PTPRD-203ENST00000381196 DUOX2Q9NRD8 1548 aa5.84□□□□□ -1.48
PTPRD-203ENST00000381196 MAP9Q49MG5 647 aa5.84□□□□□ -1.48
PTPRD-203ENST00000381196 RRP12Q5JTH9 1297 aaKnown RBP5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms