RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 EIF4G2P78344 907 aaKnown RBP eCLIP20.8■□□□□ 0.92
VCX3B-201ENST00000381029 TMF1P82094 1093 aa20.8■□□□□ 0.92
VCX3B-201ENST00000381029 SLC12A5Q9H2X9 1139 aa20.8■□□□□ 0.92
VCX3B-201ENST00000381029 NRKQ7Z2Y5 1582 aa20.8■□□□□ 0.92
VCX3B-201ENST00000381029 CABLES1Q8TDN4 633 aa20.78■□□□□ 0.92
VCX3B-201ENST00000381029 ZNF692Q9BU19 519 aaPredicted RBP20.78■□□□□ 0.92
VCX3B-201ENST00000381029 NINLQ9Y2I6 1382 aa20.77■□□□□ 0.92
VCX3B-201ENST00000381029 MON2Q7Z3U7 1717 aa20.77■□□□□ 0.92
VCX3B-201ENST00000381029 ADAMTS2O95450 1211 aa20.76■□□□□ 0.91
VCX3B-201ENST00000381029 USP19O94966 1318 aa20.76■□□□□ 0.91
VCX3B-201ENST00000381029 A0A1W2PP64 1363 aa20.75■□□□□ 0.91
VCX3B-201ENST00000381029 PAK3O75914 559 aaPredicted RBP20.75■□□□□ 0.91
VCX3B-201ENST00000381029 TTC21BQ7Z4L5 1316 aa20.75■□□□□ 0.91
VCX3B-201ENST00000381029 LMOD2Q6P5Q4 547 aa20.74■□□□□ 0.91
VCX3B-201ENST00000381029 POTEAQ6S8J7 498 aa20.74■□□□□ 0.91
VCX3B-201ENST00000381029 FNBP4Q8N3X1 1017 aaPredicted RBP20.74■□□□□ 0.91
VCX3B-201ENST00000381029 MARF1Q9Y4F3 1742 aaKnown RBP20.74■□□□□ 0.91
VCX3B-201ENST00000381029 PIK3C2AO00443 1686 aa20.73■□□□□ 0.91
VCX3B-201ENST00000381029 KTN1Q86UP2 1357 aaKnown RBP20.73■□□□□ 0.91
VCX3B-201ENST00000381029 C11orf95C9JLR9 678 aaPredicted RBP20.72■□□□□ 0.91
VCX3B-201ENST00000381029 MEX3CQ5U5Q3 659 aaKnown RBP20.72■□□□□ 0.91
VCX3B-201ENST00000381029 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
VCX3B-201ENST00000381029 MYOM1P52179 1685 aa20.72■□□□□ 0.91
VCX3B-201ENST00000381029 SLIT2O94813 1529 aa20.72■□□□□ 0.91
VCX3B-201ENST00000381029 AFF2P51816 1311 aa20.72■□□□□ 0.91
VCX3B-201ENST00000381029 BCL9LQ86UU0 1499 aa20.71■□□□□ 0.91
VCX3B-201ENST00000381029 CDCA8Q53HL2 280 aa20.71■□□□□ 0.91
VCX3B-201ENST00000381029 ABTB2Q8N961 1025 aa20.71■□□□□ 0.91
VCX3B-201ENST00000381029 TMC1Q8TDI8 760 aa20.71■□□□□ 0.91
VCX3B-201ENST00000381029 C8orf37Q96NL8 207 aa20.71■□□□□ 0.91
VCX3B-201ENST00000381029 TTC21AQ8NDW8 1320 aa20.71■□□□□ 0.91
VCX3B-201ENST00000381029 ANKRD36BQ8N2N9 1353 aa20.71■□□□□ 0.91
VCX3B-201ENST00000381029 PHRF1Q9P1Y6 1649 aaKnown RBP20.71■□□□□ 0.91
VCX3B-201ENST00000381029 EDC4Q6P2E9 1401 aaKnown RBP20.7■□□□□ 0.9
VCX3B-201ENST00000381029 NUTM2GQ5VZR2 741 aa20.7■□□□□ 0.9
VCX3B-201ENST00000381029 SLIT3O75094 1523 aa20.69■□□□□ 0.9
VCX3B-201ENST00000381029 TERF2IPQ9NYB0 399 aa20.69■□□□□ 0.9
VCX3B-201ENST00000381029 USP31Q70CQ4 1352 aa20.68■□□□□ 0.9
VCX3B-201ENST00000381029 USP54Q70EL1 1684 aa20.67■□□□□ 0.9
VCX3B-201ENST00000381029 ZNF772Q68DY9 489 aaPredicted RBP20.67■□□□□ 0.9
VCX3B-201ENST00000381029 HDGFL2Q7Z4V5 671 aaPredicted RBP20.67■□□□□ 0.9
VCX3B-201ENST00000381029 NGLY1Q96IV0 654 aa20.67■□□□□ 0.9
VCX3B-201ENST00000381029 FAM83GA6ND36 823 aa20.66■□□□□ 0.9
VCX3B-201ENST00000381029 NLRP13Q86W25 1043 aa20.66■□□□□ 0.9
VCX3B-201ENST00000381029 NLRP6P59044 892 aa20.65■□□□□ 0.9
VCX3B-201ENST00000381029 CPDO75976 1380 aa20.64■□□□□ 0.89
VCX3B-201ENST00000381029 PLEKHG5O94827 1062 aa20.64■□□□□ 0.89
VCX3B-201ENST00000381029 ZRANB1Q9UGI0 708 aa20.64■□□□□ 0.89
VCX3B-201ENST00000381029 ATRNO75882 1429 aa20.63■□□□□ 0.89
VCX3B-201ENST00000381029 KIAA0232Q92628 1395 aa20.63■□□□□ 0.89
VCX3B-201ENST00000381029 GCP02774 474 aa20.63■□□□□ 0.89
VCX3B-201ENST00000381029 NME9Q86XW9 330 aa20.63■□□□□ 0.89
VCX3B-201ENST00000381029 CARD14Q9BXL6 1004 aa20.63■□□□□ 0.89
VCX3B-201ENST00000381029 USP21Q9UK80 565 aa20.63■□□□□ 0.89
VCX3B-201ENST00000381029 OVOS2A0A0J9YW53 1432 aa20.62■□□□□ 0.89
VCX3B-201ENST00000381029 OVOS2Q6IE36 1432 aa20.62■□□□□ 0.89
VCX3B-201ENST00000381029 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.62■□□□□ 0.89
VCX3B-201ENST00000381029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.62■□□□□ 0.89
VCX3B-201ENST00000381029 PLCH1Q4KWH8 1693 aa20.61■□□□□ 0.89
VCX3B-201ENST00000381029 HAP1P54257 671 aaPredicted RBP20.61■□□□□ 0.89
VCX3B-201ENST00000381029 NFAT5O94916 1531 aa20.61■□□□□ 0.89
VCX3B-201ENST00000381029 COL14A1Q05707 1796 aaKnown RBP20.61■□□□□ 0.89
VCX3B-201ENST00000381029 NWD2Q9ULI1 1742 aa20.61■□□□□ 0.89
VCX3B-201ENST00000381029 KIF7Q2M1P5 1343 aa20.6■□□□□ 0.89
VCX3B-201ENST00000381029 NRAPQ86VF7 1730 aa20.6■□□□□ 0.89
VCX3B-201ENST00000381029 LMO7Q8WWI1 1683 aa20.6■□□□□ 0.89
VCX3B-201ENST00000381029 UNC5CLQ8IV45 518 aa20.59■□□□□ 0.89
VCX3B-201ENST00000381029 QTRT2Q9H974 415 aaKnown RBP20.59■□□□□ 0.89
VCX3B-201ENST00000381029 ZC3H6P61129 1189 aaKnown RBP20.58■□□□□ 0.89
VCX3B-201ENST00000381029 PRDM11Q9NQV5 511 aa20.57■□□□□ 0.88
VCX3B-201ENST00000381029 FYB1O15117 783 aa20.56■□□□□ 0.88
VCX3B-201ENST00000381029 CHRNA2Q15822 529 aa20.56■□□□□ 0.88
VCX3B-201ENST00000381029 ARHGEF25Q86VW2 580 aa20.56■□□□□ 0.88
VCX3B-201ENST00000381029 TRPC5Q9UL62 973 aaPredicted RBP20.56■□□□□ 0.88
VCX3B-201ENST00000381029 CAMTA1Q9Y6Y1 1673 aa20.56■□□□□ 0.88
VCX3B-201ENST00000381029 COL18A1P39060 1754 aa20.56■□□□□ 0.88
VCX3B-201ENST00000381029 CDK12Q9NYV4 1490 aaPredicted RBP20.56■□□□□ 0.88
VCX3B-201ENST00000381029 BTG4Q9NY30 223 aa20.55■□□□□ 0.88
VCX3B-201ENST00000381029 NSD3Q9BZ95 1437 aa20.54■□□□□ 0.88
VCX3B-201ENST00000381029 VPS72Q15906 364 aa20.54■□□□□ 0.88
VCX3B-201ENST00000381029 KCNH5Q8NCM2 988 aa20.54■□□□□ 0.88
VCX3B-201ENST00000381029 AATKQ6ZMQ8 1374 aa20.54■□□□□ 0.88
VCX3B-201ENST00000381029 GLI3P10071 1580 aa20.54■□□□□ 0.88
VCX3B-201ENST00000381029 WASHC2AQ641Q2 1341 aa20.53■□□□□ 0.88
VCX3B-201ENST00000381029 RBM6P78332 1123 aaKnown RBP20.53■□□□□ 0.88
VCX3B-201ENST00000381029 CCDC7Q96M83 1385 aa20.53■□□□□ 0.88
VCX3B-201ENST00000381029 RXRBP28702 533 aa20.52■□□□□ 0.88
VCX3B-201ENST00000381029 GJD4Q96KN9 370 aaPredicted RBP20.51■□□□□ 0.87
VCX3B-201ENST00000381029 POLR3GLQ9BT43 218 aa20.51■□□□□ 0.87
VCX3B-201ENST00000381029 PANK3Q9H999 370 aa20.51■□□□□ 0.87
VCX3B-201ENST00000381029 AXIN2Q9Y2T1 843 aa20.5■□□□□ 0.87
VCX3B-201ENST00000381029 RGS12O14924 1447 aa20.5■□□□□ 0.87
VCX3B-201ENST00000381029 COL5A2P05997 1499 aaPredicted RBP20.5■□□□□ 0.87
VCX3B-201ENST00000381029 ABCC6O95255 1503 aa20.49■□□□□ 0.87
VCX3B-201ENST00000381029 GGNBP2Q9H3C7 697 aa20.49■□□□□ 0.87
VCX3B-201ENST00000381029 COG3Q96JB2 828 aa20.48■□□□□ 0.87
VCX3B-201ENST00000381029 ONECUT3O60422 494 aaPredicted RBP20.47■□□□□ 0.87
VCX3B-201ENST00000381029 KIF20BQ96Q89 1820 aa20.47■□□□□ 0.87
VCX3B-201ENST00000381029 SPATA31A5Q5VU36 1347 aa20.47■□□□□ 0.87
VCX3B-201ENST00000381029 SPATA31A7Q8IWB4 1347 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms