RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 LCE2AQ5TA79 106 aaPredicted RBP9.22□□□□□ -0.93
SNAPC3-201ENST00000380799 RIC3Q7Z5B4 369 aa9.22□□□□□ -0.93
SNAPC3-201ENST00000380799 CAPN5O15484 640 aaPredicted RBP9.21□□□□□ -0.94
SNAPC3-201ENST00000380799 SNRPBP14678 240 aaKnown RBP9.21□□□□□ -0.94
SNAPC3-201ENST00000380799 MPNDQ8N594 471 aa9.21□□□□□ -0.94
SNAPC3-201ENST00000380799 PCDHB15Q9Y5E8 787 aa9.21□□□□□ -0.94
SNAPC3-201ENST00000380799 HRCP23327 699 aa9.2□□□□□ -0.94
SNAPC3-201ENST00000380799 CFAP99D6REC4 459 aa9.19□□□□□ -0.94
SNAPC3-201ENST00000380799 PDE4DQ08499 809 aa9.18□□□□□ -0.94
SNAPC3-201ENST00000380799 NFX1Q12986 1120 aaKnown RBP9.18□□□□□ -0.94
SNAPC3-201ENST00000380799 TUSC1Q2TAM9 212 aa9.18□□□□□ -0.94
SNAPC3-201ENST00000380799 FAM174AQ8TBP5 190 aa9.18□□□□□ -0.94
SNAPC3-201ENST00000380799 TLL2Q9Y6L7 1015 aa9.17□□□□□ -0.94
SNAPC3-201ENST00000380799 NUTM2BA6NNL0 878 aaPredicted RBP9.16□□□□□ -0.94
SNAPC3-201ENST00000380799 NUTM2EB1AL46 878 aaPredicted RBP9.16□□□□□ -0.94
SNAPC3-201ENST00000380799 TERTO14746 1132 aaKnown RBP9.16□□□□□ -0.94
SNAPC3-201ENST00000380799 CSPP1Q1MSJ5 1256 aa9.16□□□□□ -0.94
SNAPC3-201ENST00000380799 NUTM2DQ5VT03 806 aaPredicted RBP9.16□□□□□ -0.94
SNAPC3-201ENST00000380799 NUTM2AQ8IVF1 878 aaPredicted RBP9.16□□□□□ -0.94
SNAPC3-201ENST00000380799 F12P00748 615 aaPredicted RBP9.15□□□□□ -0.94
SNAPC3-201ENST00000380799 NNTQ13423 1086 aa9.15□□□□□ -0.94
SNAPC3-201ENST00000380799 MYSM1Q5VVJ2 828 aa9.15□□□□□ -0.94
SNAPC3-201ENST00000380799 ARMC2Q8NEN0 867 aa9.15□□□□□ -0.94
SNAPC3-201ENST00000380799 CABLES1Q8TDN4 633 aa9.15□□□□□ -0.94
SNAPC3-201ENST00000380799 WIPF1O43516 503 aa9.14□□□□□ -0.95
SNAPC3-201ENST00000380799 RSPH6AQ9H0K4 717 aa9.14□□□□□ -0.95
SNAPC3-201ENST00000380799 ADH1CP00326 375 aa9.13□□□□□ -0.95
SNAPC3-201ENST00000380799 BMP1P13497 986 aa9.13□□□□□ -0.95
SNAPC3-201ENST00000380799 INSM1Q01101 510 aaPredicted RBP9.13□□□□□ -0.95
SNAPC3-201ENST00000380799 BPHLQ86WA6 291 aaPredicted RBP9.13□□□□□ -0.95
SNAPC3-201ENST00000380799 HELBQ8NG08 1087 aaPredicted RBP9.13□□□□□ -0.95
SNAPC3-201ENST00000380799 SLC16A10Q8TF71 515 aa9.13□□□□□ -0.95
SNAPC3-201ENST00000380799 TSC1Q92574 1164 aa9.13□□□□□ -0.95
SNAPC3-201ENST00000380799 MAP10Q9P2G4 905 aa9.13□□□□□ -0.95
SNAPC3-201ENST00000380799 AGERQ15109 404 aa9.12□□□□□ -0.95
SNAPC3-201ENST00000380799 TRIM46Q7Z4K8 759 aa9.12□□□□□ -0.95
SNAPC3-201ENST00000380799 SLC24A3Q9HC58 644 aa9.12□□□□□ -0.95
SNAPC3-201ENST00000380799 LIMD1Q9UGP4 676 aa9.12□□□□□ -0.95
SNAPC3-201ENST00000380799 LILRB3O75022 631 aa9.11□□□□□ -0.95
SNAPC3-201ENST00000380799 SCARF1Q14162 830 aa9.11□□□□□ -0.95
SNAPC3-201ENST00000380799 CDK15Q96Q40 435 aa9.11□□□□□ -0.95
SNAPC3-201ENST00000380799 CLK2P49760 499 aaKnown RBP9.1□□□□□ -0.95
SNAPC3-201ENST00000380799 QPCTQ16769 361 aa9.1□□□□□ -0.95
SNAPC3-201ENST00000380799 NBPF14Q5TI25 921 aa9.1□□□□□ -0.95
SNAPC3-201ENST00000380799 NPAS3Q8IXF0 933 aa9.1□□□□□ -0.95
SNAPC3-201ENST00000380799 FOXJ1Q92949 421 aa9.1□□□□□ -0.95
SNAPC3-201ENST00000380799 NXF1Q9UBU9 619 aaKnown RBP9.1□□□□□ -0.95
SNAPC3-201ENST00000380799 PER1O15534 1290 aaPredicted RBP9.09□□□□□ -0.95
SNAPC3-201ENST00000380799 WDR4P57081 412 aaKnown RBP9.09□□□□□ -0.95
SNAPC3-201ENST00000380799 NR5A1Q13285 461 aa9.09□□□□□ -0.95
SNAPC3-201ENST00000380799 ARID5BQ14865 1188 aa9.09□□□□□ -0.95
SNAPC3-201ENST00000380799 STK17AQ9UEE5 414 aa9.09□□□□□ -0.95
SNAPC3-201ENST00000380799 TIMP2P16035 220 aa9.08□□□□□ -0.96
SNAPC3-201ENST00000380799 MRPL14Q6P1L8 145 aaKnown RBP9.08□□□□□ -0.96
SNAPC3-201ENST00000380799 ZFP42Q96MM3 310 aa9.07□□□□□ -0.96
SNAPC3-201ENST00000380799 GPKOWQ92917 476 aaPredicted RBP eCLIP9.06□□□□□ -0.96
SNAPC3-201ENST00000380799 IRF7Q92985 503 aa9.05□□□□□ -0.96
SNAPC3-201ENST00000380799 KLF16Q9BXK1 252 aaPredicted RBP9.05□□□□□ -0.96
SNAPC3-201ENST00000380799 RTL5Q5HYW3 569 aaPredicted RBP9.04□□□□□ -0.96
SNAPC3-201ENST00000380799 UPP2O95045 317 aa9.03□□□□□ -0.96
SNAPC3-201ENST00000380799 ZIC2O95409 532 aaPredicted RBP9.03□□□□□ -0.96
SNAPC3-201ENST00000380799 C4orf48Q5BLP8 95 aa9.03□□□□□ -0.96
SNAPC3-201ENST00000380799 PURBQ96QR8 312 aaKnown RBP9.03□□□□□ -0.96
SNAPC3-201ENST00000380799 C1QTNF2Q9BXJ5 285 aa9.03□□□□□ -0.96
SNAPC3-201ENST00000380799 POLR3EQ9NVU0 708 aa9.03□□□□□ -0.96
SNAPC3-201ENST00000380799 MAP4K5Q9Y4K4 846 aa9.03□□□□□ -0.96
SNAPC3-201ENST00000380799 GRM5P41594 1212 aa9.02□□□□□ -0.97
SNAPC3-201ENST00000380799 SH3RF1Q7Z6J0 888 aa9.02□□□□□ -0.97
SNAPC3-201ENST00000380799 TRMT44Q8IYL2 757 aaKnown RBP9.02□□□□□ -0.97
SNAPC3-201ENST00000380799 H3BM21 787 aa9.01□□□□□ -0.97
SNAPC3-201ENST00000380799 ITPKCQ96DU7 683 aa9.01□□□□□ -0.97
SNAPC3-201ENST00000380799 FAM181BA6NEQ2 426 aa9□□□□□ -0.97
SNAPC3-201ENST00000380799 NR3C2P08235 984 aa9□□□□□ -0.97
SNAPC3-201ENST00000380799 LCE2CQ5TA81 110 aa9□□□□□ -0.97
SNAPC3-201ENST00000380799 VASH1Q7L8A9 365 aaPredicted RBP9□□□□□ -0.97
SNAPC3-201ENST00000380799 SH3BP5LQ7L8J4 393 aa9□□□□□ -0.97
SNAPC3-201ENST00000380799 DDRGK1Q96HY6 314 aa9□□□□□ -0.97
SNAPC3-201ENST00000380799 MAGEB6P1A0A0J9YX57 407 aa8.99□□□□□ -0.97
SNAPC3-201ENST00000380799 FSHRP23945 695 aa8.99□□□□□ -0.97
SNAPC3-201ENST00000380799 SKIV2LQ15477 1246 aaKnown RBP8.99□□□□□ -0.97
SNAPC3-201ENST00000380799 ZFAND3Q9H8U3 227 aa8.99□□□□□ -0.97
SNAPC3-201ENST00000380799 MAN1A2O60476 641 aa8.98□□□□□ -0.97
SNAPC3-201ENST00000380799 SH3D19Q5HYK7 790 aa8.98□□□□□ -0.97
SNAPC3-201ENST00000380799 EMILIN1Q9Y6C2 1016 aa8.98□□□□□ -0.97
SNAPC3-201ENST00000380799 MEIOBQ8N635 442 aa8.97□□□□□ -0.97
SNAPC3-201ENST00000380799 BMP2P12643 396 aa8.96□□□□□ -0.98
SNAPC3-201ENST00000380799 GMPRP36959 345 aa8.96□□□□□ -0.98
SNAPC3-201ENST00000380799 CTDSPL2Q05D32 466 aa8.96□□□□□ -0.98
SNAPC3-201ENST00000380799 C6orf118Q5T5N4 469 aa8.96□□□□□ -0.98
SNAPC3-201ENST00000380799 PDXDC2PQ6P474 469 aa8.96□□□□□ -0.98
SNAPC3-201ENST00000380799 CCDC116Q8IYX3 515 aa8.96□□□□□ -0.98
SNAPC3-201ENST00000380799 LINC00528Q8N1L1 170 aa8.96□□□□□ -0.98
SNAPC3-201ENST00000380799 CARD14Q9BXL6 1004 aa8.96□□□□□ -0.98
SNAPC3-201ENST00000380799 CDV3Q9UKY7 258 aaKnown RBP8.96□□□□□ -0.98
SNAPC3-201ENST00000380799 ATP1B4Q9UN42 357 aaPredicted RBP8.96□□□□□ -0.98
SNAPC3-201ENST00000380799 ZC3H4Q9UPT8 1303 aaKnown RBP8.96□□□□□ -0.98
SNAPC3-201ENST00000380799 VEGFBP49765 207 aa8.95□□□□□ -0.98
SNAPC3-201ENST00000380799 ARHGAP9Q9BRR9 750 aa8.95□□□□□ -0.98
SNAPC3-201ENST00000380799 TSEN34Q9BSV6 310 aaKnown RBP8.95□□□□□ -0.98
SNAPC3-201ENST00000380799 KDM4CQ9H3R0 1056 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms