RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 ZHX1Q9UKY1 873 aaPredicted RBP5.68□□□□□ -1.5
PTCD2-202ENST00000380639 TCERG1LQ5VWI1 586 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 CWC25Q9NXE8 425 aaPredicted RBP5.68□□□□□ -1.5
PTCD2-202ENST00000380639 RABEP1Q15276 862 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 CCDC158Q5M9N0 1113 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 CEP128Q6ZU80 1094 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 RUFY3Q7L099 469 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 NAP1L4Q99733 375 aaKnown RBP5.68□□□□□ -1.5
PTCD2-202ENST00000380639 SLKQ9H2G2 1235 aaPredicted RBP5.68□□□□□ -1.5
PTCD2-202ENST00000380639 TRIM17Q9Y577 477 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 ERLIN1O75477 346 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 WDHD1O75717 1129 aaPredicted RBP5.68□□□□□ -1.5
PTCD2-202ENST00000380639 TOMM22Q9NS69 142 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 SLC4A1P02730 911 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 TMC1Q8TDI8 760 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 BECN2A8MW95 431 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 LRRCC1Q9C099 1032 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 UBAP1Q9NZ09 502 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 STK10O94804 968 aaKnown RBP5.67□□□□□ -1.5
PTCD2-202ENST00000380639 NBPF6Q5VWK0 638 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 NBPF4Q96M43 638 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 CALCOCO2Q13137 446 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 NAA25Q14CX7 972 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 VPS53Q5VIR6 699 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 CCDC27Q2M243 656 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 P3H3Q8IVL6 736 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 SH3BP5O60239 455 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 IQCEQ6IPM2 695 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 CTR9Q6PD62 1173 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 ERCC3P19447 782 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 HSP90AA5PQ58FG0 334 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 CTAGE6Q86UF2 777 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 PRPF38AQ8NAV1 312 aaKnown RBP5.66□□□□□ -1.5
PTCD2-202ENST00000380639 RNF214Q8ND24 703 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 POTEB2H3BUK9 544 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 NOP56O00567 594 aaKnown RBP5.66□□□□□ -1.5
PTCD2-202ENST00000380639 KIF1CO43896 1103 aaKnown RBP5.66□□□□□ -1.5
PTCD2-202ENST00000380639 PPFIA2O75334 1257 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 RBM26Q5T8P6 1007 aaKnown RBP5.66□□□□□ -1.5
PTCD2-202ENST00000380639 SMC1BQ8NDV3 1235 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 PDCD2Q16342 344 aaPredicted RBP5.66□□□□□ -1.5
PTCD2-202ENST00000380639 USP37Q86T82 979 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 GBP3Q9H0R5 595 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 LUZP1Q86V48 1076 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 ZNF280CQ8ND82 737 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 ZMYND15Q9H091 742 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 LSM1O15116 133 aaKnown RBP5.66□□□□□ -1.5
PTCD2-202ENST00000380639 SERPINI2O75830 405 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 TXLNBQ8N3L3 684 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 RMDN2Q96LZ7 410 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 BASP1P80723 227 aaKnown RBP5.66□□□□□ -1.5
PTCD2-202ENST00000380639 POLR3GO15318 223 aaPredicted RBP5.65□□□□□ -1.5
PTCD2-202ENST00000380639 CBX1P83916 185 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 KCTD17Q8N5Z5 321 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 FLCNQ8NFG4 579 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 DDX27Q96GQ7 796 aaKnown RBP5.65□□□□□ -1.5
PTCD2-202ENST00000380639 CCDC113Q9H0I3 377 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 TNIP1Q15025 636 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 MIER3Q7Z3K6 550 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 NBPF11Q86T75 865 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 VCX3BQ9H321 246 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 STK3Q13188 491 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 KLHL10Q6JEL2 608 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 ESYT2A0FGR8 921 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 RAP1GDS1P52306 607 aa5.65□□□□□ -1.51
PTCD2-202ENST00000380639 POLE3Q9NRF9 147 aa5.65□□□□□ -1.51
PTCD2-202ENST00000380639 CFAP65Q6ZU64 1925 aaKnown RBP5.65□□□□□ -1.51
PTCD2-202ENST00000380639 U2SURPO15042 1029 aaKnown RBP5.65□□□□□ -1.51
PTCD2-202ENST00000380639 PSMD6Q15008 389 aa5.65□□□□□ -1.51
PTCD2-202ENST00000380639 KIF6Q6ZMV9 814 aa5.65□□□□□ -1.51
PTCD2-202ENST00000380639 SUPT16HQ9Y5B9 1047 aaKnown RBP5.65□□□□□ -1.51
PTCD2-202ENST00000380639 CCDC92Q53HC0 331 aaPredicted RBP5.65□□□□□ -1.51
PTCD2-202ENST00000380639 DACT3Q96B18 629 aaPredicted RBP5.65□□□□□ -1.51
PTCD2-202ENST00000380639 TACC1O75410 805 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 CA8P35219 290 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 MARCH6O60337 910 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 LUC7L3O95232 432 aaKnown RBP5.64□□□□□ -1.51
PTCD2-202ENST00000380639 BCL2L13Q9BXK5 485 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 PRDM5Q9NQX1 630 aaPredicted RBP5.64□□□□□ -1.51
PTCD2-202ENST00000380639 HOOK1Q9UJC3 728 aaKnown RBP5.64□□□□□ -1.51
PTCD2-202ENST00000380639 RNF20Q5VTR2 975 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 CTAGE9A4FU28 777 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 ATP6V1AP38606 617 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 GOLGA8QA0A0J9YX86 632 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 GOLGA8OA6NCC3 632 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 GOLGA8NF8WBI6 632 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 ERC2O15083 957 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 KCNA4P22459 653 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 PAWRQ96IZ0 340 aaKnown RBP5.64□□□□□ -1.51
PTCD2-202ENST00000380639 CCDC40Q4G0X9 1142 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 STMN4Q9H169 189 aaPredicted RBP5.64□□□□□ -1.51
PTCD2-202ENST00000380639 ESF1Q9H501 851 aaKnown RBP5.64□□□□□ -1.51
PTCD2-202ENST00000380639 MAK16Q9BXY0 300 aaKnown RBP5.63□□□□□ -1.51
PTCD2-202ENST00000380639 LUC7LQ9NQ29 371 aaKnown RBP5.63□□□□□ -1.51
PTCD2-202ENST00000380639 RAI14Q9P0K7 980 aa5.63□□□□□ -1.51
PTCD2-202ENST00000380639 KIF4AO95239 1232 aa5.63□□□□□ -1.51
PTCD2-202ENST00000380639 TRIM60Q495X7 471 aa5.63□□□□□ -1.51
PTCD2-202ENST00000380639 PALMDQ9NP74 551 aa5.63□□□□□ -1.51
PTCD2-202ENST00000380639 PPP1R12BO60237 982 aaPredicted RBP5.63□□□□□ -1.51
PTCD2-202ENST00000380639 LZTS3O60299 673 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms