RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 ZHX1Q9UKY1 873 aaPredicted RBP5.68□□□□□ -1.5
PTCD2-202ENST00000380639 TCERG1LQ5VWI1 586 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 CWC25Q9NXE8 425 aaPredicted RBP5.68□□□□□ -1.5
PTCD2-202ENST00000380639 RABEP1Q15276 862 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 CCDC158Q5M9N0 1113 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 CEP128Q6ZU80 1094 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 RUFY3Q7L099 469 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 NAP1L4Q99733 375 aaKnown RBP5.68□□□□□ -1.5
PTCD2-202ENST00000380639 SLKQ9H2G2 1235 aaPredicted RBP5.68□□□□□ -1.5
PTCD2-202ENST00000380639 TRIM17Q9Y577 477 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 ERLIN1O75477 346 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 WDHD1O75717 1129 aaPredicted RBP5.68□□□□□ -1.5
PTCD2-202ENST00000380639 TOMM22Q9NS69 142 aa5.68□□□□□ -1.5
PTCD2-202ENST00000380639 SLC4A1P02730 911 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 TMC1Q8TDI8 760 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 BECN2A8MW95 431 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 LRRCC1Q9C099 1032 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 UBAP1Q9NZ09 502 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 STK10O94804 968 aaKnown RBP5.67□□□□□ -1.5
PTCD2-202ENST00000380639 NBPF6Q5VWK0 638 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 NBPF4Q96M43 638 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 CALCOCO2Q13137 446 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 NAA25Q14CX7 972 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 VPS53Q5VIR6 699 aa5.67□□□□□ -1.5
PTCD2-202ENST00000380639 CCDC27Q2M243 656 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 P3H3Q8IVL6 736 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 SH3BP5O60239 455 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 IQCEQ6IPM2 695 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 CTR9Q6PD62 1173 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 ERCC3P19447 782 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 HSP90AA5PQ58FG0 334 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 CTAGE6Q86UF2 777 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 PRPF38AQ8NAV1 312 aaKnown RBP5.66□□□□□ -1.5
PTCD2-202ENST00000380639 RNF214Q8ND24 703 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 POTEB2H3BUK9 544 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 NOP56O00567 594 aaKnown RBP5.66□□□□□ -1.5
PTCD2-202ENST00000380639 KIF1CO43896 1103 aaKnown RBP5.66□□□□□ -1.5
PTCD2-202ENST00000380639 PPFIA2O75334 1257 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 RBM26Q5T8P6 1007 aaKnown RBP5.66□□□□□ -1.5
PTCD2-202ENST00000380639 SMC1BQ8NDV3 1235 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 PDCD2Q16342 344 aaPredicted RBP5.66□□□□□ -1.5
PTCD2-202ENST00000380639 USP37Q86T82 979 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 GBP3Q9H0R5 595 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 LUZP1Q86V48 1076 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 ZNF280CQ8ND82 737 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 ZMYND15Q9H091 742 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 LSM1O15116 133 aaKnown RBP5.66□□□□□ -1.5
PTCD2-202ENST00000380639 SERPINI2O75830 405 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 TXLNBQ8N3L3 684 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 RMDN2Q96LZ7 410 aa5.66□□□□□ -1.5
PTCD2-202ENST00000380639 BASP1P80723 227 aaKnown RBP5.66□□□□□ -1.5
PTCD2-202ENST00000380639 POLR3GO15318 223 aaPredicted RBP5.65□□□□□ -1.5
PTCD2-202ENST00000380639 CBX1P83916 185 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 KCTD17Q8N5Z5 321 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 FLCNQ8NFG4 579 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 DDX27Q96GQ7 796 aaKnown RBP5.65□□□□□ -1.5
PTCD2-202ENST00000380639 CCDC113Q9H0I3 377 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 TNIP1Q15025 636 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 MIER3Q7Z3K6 550 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 NBPF11Q86T75 865 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 VCX3BQ9H321 246 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 STK3Q13188 491 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 KLHL10Q6JEL2 608 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 ESYT2A0FGR8 921 aa5.65□□□□□ -1.5
PTCD2-202ENST00000380639 RAP1GDS1P52306 607 aa5.65□□□□□ -1.51
PTCD2-202ENST00000380639 POLE3Q9NRF9 147 aa5.65□□□□□ -1.51
PTCD2-202ENST00000380639 CFAP65Q6ZU64 1925 aaKnown RBP5.65□□□□□ -1.51
PTCD2-202ENST00000380639 U2SURPO15042 1029 aaKnown RBP5.65□□□□□ -1.51
PTCD2-202ENST00000380639 PSMD6Q15008 389 aa5.65□□□□□ -1.51
PTCD2-202ENST00000380639 KIF6Q6ZMV9 814 aa5.65□□□□□ -1.51
PTCD2-202ENST00000380639 SUPT16HQ9Y5B9 1047 aaKnown RBP5.65□□□□□ -1.51
PTCD2-202ENST00000380639 CCDC92Q53HC0 331 aaPredicted RBP5.65□□□□□ -1.51
PTCD2-202ENST00000380639 DACT3Q96B18 629 aaPredicted RBP5.65□□□□□ -1.51
PTCD2-202ENST00000380639 TACC1O75410 805 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 CA8P35219 290 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 MARCH6O60337 910 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 LUC7L3O95232 432 aaKnown RBP5.64□□□□□ -1.51
PTCD2-202ENST00000380639 BCL2L13Q9BXK5 485 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 PRDM5Q9NQX1 630 aaPredicted RBP5.64□□□□□ -1.51
PTCD2-202ENST00000380639 HOOK1Q9UJC3 728 aaKnown RBP5.64□□□□□ -1.51
PTCD2-202ENST00000380639 RNF20Q5VTR2 975 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 CTAGE9A4FU28 777 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 ATP6V1AP38606 617 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 GOLGA8QA0A0J9YX86 632 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 GOLGA8OA6NCC3 632 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 GOLGA8NF8WBI6 632 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 ERC2O15083 957 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 KCNA4P22459 653 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 PAWRQ96IZ0 340 aaKnown RBP5.64□□□□□ -1.51
PTCD2-202ENST00000380639 CCDC40Q4G0X9 1142 aa5.64□□□□□ -1.51
PTCD2-202ENST00000380639 STMN4Q9H169 189 aaPredicted RBP5.64□□□□□ -1.51
PTCD2-202ENST00000380639 ESF1Q9H501 851 aaKnown RBP5.64□□□□□ -1.51
PTCD2-202ENST00000380639 MAK16Q9BXY0 300 aaKnown RBP5.63□□□□□ -1.51
PTCD2-202ENST00000380639 LUC7LQ9NQ29 371 aaKnown RBP5.63□□□□□ -1.51
PTCD2-202ENST00000380639 RAI14Q9P0K7 980 aa5.63□□□□□ -1.51
PTCD2-202ENST00000380639 KIF4AO95239 1232 aa5.63□□□□□ -1.51
PTCD2-202ENST00000380639 TRIM60Q495X7 471 aa5.63□□□□□ -1.51
PTCD2-202ENST00000380639 PALMDQ9NP74 551 aa5.63□□□□□ -1.51
PTCD2-202ENST00000380639 PPP1R12BO60237 982 aaPredicted RBP5.63□□□□□ -1.51
PTCD2-202ENST00000380639 LZTS3O60299 673 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms