RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 SART3Q15020 963 aaKnown RBP19.25■□□□□ 0.67
COL2A1-202ENST00000380518 CCDC43Q96MW1 224 aaKnown RBP19.25■□□□□ 0.67
COL2A1-202ENST00000380518 GRIN2BQ13224 1484 aa19.25■□□□□ 0.67
COL2A1-202ENST00000380518 NOB1Q9ULX3 412 aaKnown RBP19.24■□□□□ 0.67
COL2A1-202ENST00000380518 WDR63Q8IWG1 891 aa19.24■□□□□ 0.67
COL2A1-202ENST00000380518 BCAR3O75815 825 aa19.24■□□□□ 0.67
COL2A1-202ENST00000380518 CCDC27Q2M243 656 aa19.24■□□□□ 0.67
COL2A1-202ENST00000380518 TSR2Q969E8 191 aaKnown RBP19.24■□□□□ 0.67
COL2A1-202ENST00000380518 ANO8Q9HCE9 1232 aaPredicted RBP19.23■□□□□ 0.67
COL2A1-202ENST00000380518 KINO60870 393 aaKnown RBP19.23■□□□□ 0.67
COL2A1-202ENST00000380518 ACBD3Q9H3P7 528 aa19.23■□□□□ 0.67
COL2A1-202ENST00000380518 C1orf115Q9H7X2 142 aa19.23■□□□□ 0.67
COL2A1-202ENST00000380518 SLC4A2P04920 1241 aa19.21■□□□□ 0.67
COL2A1-202ENST00000380518 CCT4P50991 539 aaKnown RBP19.21■□□□□ 0.67
COL2A1-202ENST00000380518 TRIM5Q9C035 493 aa19.21■□□□□ 0.67
COL2A1-202ENST00000380518 PRPF40AO75400 957 aaKnown RBP19.21■□□□□ 0.67
COL2A1-202ENST00000380518 HDGFL1Q5TGJ6 251 aa19.21■□□□□ 0.67
COL2A1-202ENST00000380518 DNAJC2Q99543 621 aaKnown RBP19.21■□□□□ 0.67
COL2A1-202ENST00000380518 C9orf84Q5VXU9 1444 aa19.21■□□□□ 0.67
COL2A1-202ENST00000380518 BACH2Q9BYV9 841 aa19.21■□□□□ 0.67
COL2A1-202ENST00000380518 ATF7IPQ6VMQ6 1270 aa19.2■□□□□ 0.66
COL2A1-202ENST00000380518 TXNDC2Q86VQ3 553 aa19.2■□□□□ 0.66
COL2A1-202ENST00000380518 ZNF692Q9BU19 519 aaPredicted RBP19.2■□□□□ 0.66
COL2A1-202ENST00000380518 NAP1L1P55209 391 aaKnown RBP19.2■□□□□ 0.66
COL2A1-202ENST00000380518 RUFY1Q96T51 708 aa19.2■□□□□ 0.66
COL2A1-202ENST00000380518 FYB1O15117 783 aa19.2■□□□□ 0.66
COL2A1-202ENST00000380518 R3HCC1Q9Y3T6 440 aaKnown RBP19.2■□□□□ 0.66
COL2A1-202ENST00000380518 AKNAQ7Z591 1439 aa19.2■□□□□ 0.66
COL2A1-202ENST00000380518 SULT6B1Q6IMI4 303 aa19.2■□□□□ 0.66
COL2A1-202ENST00000380518 CWC22Q9HCG8 908 aaKnown RBP19.19■□□□□ 0.66
COL2A1-202ENST00000380518 CDR1P51861 262 aa19.19■□□□□ 0.66
COL2A1-202ENST00000380518 TSPY26PQ9H489 355 aa19.19■□□□□ 0.66
COL2A1-202ENST00000380518 HSP90B2PQ58FF3 399 aa19.19■□□□□ 0.66
COL2A1-202ENST00000380518 OFD1O75665 1012 aa19.18■□□□□ 0.66
COL2A1-202ENST00000380518 PDILTQ8N807 584 aa19.18■□□□□ 0.66
COL2A1-202ENST00000380518 FIBPO43427 364 aa19.18■□□□□ 0.66
COL2A1-202ENST00000380518 MTERF4Q7Z6M4 381 aaKnown RBP19.18■□□□□ 0.66
COL2A1-202ENST00000380518 MVPQ14764 893 aaKnown RBP19.17■□□□□ 0.66
COL2A1-202ENST00000380518 AK7Q96M32 723 aa19.17■□□□□ 0.66
COL2A1-202ENST00000380518 CABP1Q9NZU7 370 aa19.17■□□□□ 0.66
COL2A1-202ENST00000380518 PLEKHH2Q8IVE3 1493 aa19.17■□□□□ 0.66
COL2A1-202ENST00000380518 ZNF396Q96N95 335 aaPredicted RBP19.17■□□□□ 0.66
COL2A1-202ENST00000380518 LRRCC1Q9C099 1032 aa19.17■□□□□ 0.66
COL2A1-202ENST00000380518 SLC52A1Q9NWF4 448 aa19.17■□□□□ 0.66
COL2A1-202ENST00000380518 ESCO1Q5FWF5 840 aa19.17■□□□□ 0.66
COL2A1-202ENST00000380518 SMG6Q86US8 1419 aaKnown RBP19.17■□□□□ 0.66
COL2A1-202ENST00000380518 CDK19Q9BWU1 502 aa19.17■□□□□ 0.66
COL2A1-202ENST00000380518 SRCIN1Q9C0H9 1055 aa19.16■□□□□ 0.66
COL2A1-202ENST00000380518 EFCAB5A4FU69 1503 aa19.16■□□□□ 0.66
COL2A1-202ENST00000380518 MAP7D2Q96T17 732 aa19.16■□□□□ 0.66
COL2A1-202ENST00000380518 CYP46A1Q9Y6A2 500 aa19.16■□□□□ 0.66
COL2A1-202ENST00000380518 EHBP1L1Q8N3D4 1523 aa19.16■□□□□ 0.66
COL2A1-202ENST00000380518 CT47A1Q5JQC4 288 aaPredicted RBP19.15■□□□□ 0.66
COL2A1-202ENST00000380518 KIF6Q6ZMV9 814 aa19.15■□□□□ 0.66
COL2A1-202ENST00000380518 ATP2B1P20020 1258 aa19.15■□□□□ 0.66
COL2A1-202ENST00000380518 STK38Q15208 465 aa19.15■□□□□ 0.66
COL2A1-202ENST00000380518 PRG4Q92954 1404 aaPredicted RBP19.15■□□□□ 0.66
COL2A1-202ENST00000380518 ERBINQ96RT1 1412 aa19.15■□□□□ 0.66
COL2A1-202ENST00000380518 CCDC173Q0VFZ6 552 aa19.14■□□□□ 0.66
COL2A1-202ENST00000380518 TATP17735 454 aaPredicted RBP19.14■□□□□ 0.65
COL2A1-202ENST00000380518 ANKRD1Q15327 319 aa19.14■□□□□ 0.65
COL2A1-202ENST00000380518 ZNF428Q96B54 188 aa19.14■□□□□ 0.65
COL2A1-202ENST00000380518 EPS15P42566 896 aa19.14■□□□□ 0.65
COL2A1-202ENST00000380518 CCDC158Q5M9N0 1113 aa19.14■□□□□ 0.65
COL2A1-202ENST00000380518 TROQ12816 1431 aaPredicted RBP19.14■□□□□ 0.65
COL2A1-202ENST00000380518 K7ELQ4 463 aaPredicted RBP19.13■□□□□ 0.65
COL2A1-202ENST00000380518 MEX3CQ5U5Q3 659 aaKnown RBP19.13■□□□□ 0.65
COL2A1-202ENST00000380518 AEBP1Q8IUX7 1158 aa19.13■□□□□ 0.65
COL2A1-202ENST00000380518 JMYQ8N9B5 988 aa19.13■□□□□ 0.65
COL2A1-202ENST00000380518 WDR33Q9C0J8 1336 aaKnown RBP19.13■□□□□ 0.65
COL2A1-202ENST00000380518 SMC2O95347 1197 aa19.13■□□□□ 0.65
COL2A1-202ENST00000380518 FILIP1LQ4L180 1135 aa19.13■□□□□ 0.65
COL2A1-202ENST00000380518 FMNL2Q96PY5 1086 aa19.12■□□□□ 0.65
COL2A1-202ENST00000380518 SLC3A2P08195 630 aaKnown RBP19.12■□□□□ 0.65
COL2A1-202ENST00000380518 CHD1LQ86WJ1 897 aa19.12■□□□□ 0.65
COL2A1-202ENST00000380518 HMGN5P82970 282 aaKnown RBP19.12■□□□□ 0.65
COL2A1-202ENST00000380518 TXLNAP40222 546 aa19.12■□□□□ 0.65
COL2A1-202ENST00000380518 SAMD1Q6SPF0 538 aaPredicted RBP19.12■□□□□ 0.65
COL2A1-202ENST00000380518 CCP110O43303 1012 aa19.11■□□□□ 0.65
COL2A1-202ENST00000380518 MTMR7Q9Y216 660 aa19.11■□□□□ 0.65
COL2A1-202ENST00000380518 ZNF530Q6P9A1 599 aaPredicted RBP19.11■□□□□ 0.65
COL2A1-202ENST00000380518 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.11■□□□□ 0.65
COL2A1-202ENST00000380518 PROSER2Q86WR7 435 aaPredicted RBP19.11■□□□□ 0.65
COL2A1-202ENST00000380518 PIP4K2AP48426 406 aaPredicted RBP19.1■□□□□ 0.65
COL2A1-202ENST00000380518 PRXQ9BXM0 1461 aa19.1■□□□□ 0.65
COL2A1-202ENST00000380518 RBM42Q9BTD8 480 aaKnown RBP19.1■□□□□ 0.65
COL2A1-202ENST00000380518 RPGRIP1LQ68CZ1 1315 aa19.1■□□□□ 0.65
COL2A1-202ENST00000380518 CNNM1Q9NRU3 951 aa19.1■□□□□ 0.65
COL2A1-202ENST00000380518 FAM177BA6PVY3 158 aa19.1■□□□□ 0.65
COL2A1-202ENST00000380518 KDM4AO75164 1064 aa19.1■□□□□ 0.65
COL2A1-202ENST00000380518 TTC39AQ5SRH9 613 aa19.1■□□□□ 0.65
COL2A1-202ENST00000380518 PATL2C9JE40 543 aaKnown RBP19.09■□□□□ 0.65
COL2A1-202ENST00000380518 CCDC192P0DO97 292 aa19.09■□□□□ 0.65
COL2A1-202ENST00000380518 ODF2Q5BJF6 829 aa19.09■□□□□ 0.65
COL2A1-202ENST00000380518 ERCC4Q92889 916 aaPredicted RBP19.09■□□□□ 0.65
COL2A1-202ENST00000380518 SMARCE1Q969G3 411 aa19.09■□□□□ 0.65
COL2A1-202ENST00000380518 ATAD2Q6PL18 1390 aa19.09■□□□□ 0.65
COL2A1-202ENST00000380518 ANKRD30BQ9BXX2 1392 aa19.09■□□□□ 0.65
COL2A1-202ENST00000380518 FCHSD2O94868 740 aa19.09■□□□□ 0.65
COL2A1-202ENST00000380518 RRP12Q5JTH9 1297 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms