RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 NRAPQ86VF7 1730 aa12.9□□□□□ -0.34
PMS2-202ENST00000380416 RPGRIP1LQ68CZ1 1315 aa12.89□□□□□ -0.35
PMS2-202ENST00000380416 VGFO15240 615 aaPredicted RBP12.89□□□□□ -0.35
PMS2-202ENST00000380416 CAMKK2Q96RR4 588 aa12.89□□□□□ -0.35
PMS2-202ENST00000380416 PRAG1Q86YV5 1406 aa12.88□□□□□ -0.35
PMS2-202ENST00000380416 ABCA3Q99758 1704 aa12.88□□□□□ -0.35
PMS2-202ENST00000380416 PPP1R1BQ9UD71 204 aaPredicted RBP12.88□□□□□ -0.35
PMS2-202ENST00000380416 SSUH2Q9Y2M2 353 aa12.88□□□□□ -0.35
PMS2-202ENST00000380416 CDC42BPGQ6DT37 1551 aa12.88□□□□□ -0.35
PMS2-202ENST00000380416 IFT172Q9UG01 1749 aa12.88□□□□□ -0.35
PMS2-202ENST00000380416 THSD7AQ9UPZ6 1657 aa12.87□□□□□ -0.35
PMS2-202ENST00000380416 SPDYE2BA6NHP3 402 aa12.87□□□□□ -0.35
PMS2-202ENST00000380416 SPDYE6P0CI01 402 aa12.87□□□□□ -0.35
PMS2-202ENST00000380416 SPDYE2Q495Y8 402 aa12.87□□□□□ -0.35
PMS2-202ENST00000380416 PITPNM1O00562 1244 aa12.86□□□□□ -0.35
PMS2-202ENST00000380416 SPON1Q9HCB6 807 aa12.86□□□□□ -0.35
PMS2-202ENST00000380416 SPATA31E1Q6ZUB1 1445 aa12.86□□□□□ -0.35
PMS2-202ENST00000380416 ROBO2Q9HCK4 1378 aa12.85□□□□□ -0.35
PMS2-202ENST00000380416 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
PMS2-202ENST00000380416 KCNQ2O43526 872 aa12.84□□□□□ -0.35
PMS2-202ENST00000380416 VASPP50552 380 aaPredicted RBP12.84□□□□□ -0.35
PMS2-202ENST00000380416 XPCQ01831 940 aaPredicted RBP12.84□□□□□ -0.35
PMS2-202ENST00000380416 RGL3Q3MIN7 710 aa12.84□□□□□ -0.35
PMS2-202ENST00000380416 CCDC9Q9Y3X0 531 aaKnown RBP12.84□□□□□ -0.35
PMS2-202ENST00000380416 NRKQ7Z2Y5 1582 aa12.84□□□□□ -0.35
PMS2-202ENST00000380416 ANKRD30BQ9BXX2 1392 aa12.83□□□□□ -0.36
PMS2-202ENST00000380416 A0A0G2JS52 829 aa12.83□□□□□ -0.36
PMS2-202ENST00000380416 MYT1Q01538 1121 aa12.83□□□□□ -0.36
PMS2-202ENST00000380416 FAM182BQ5T319 152 aa12.83□□□□□ -0.36
PMS2-202ENST00000380416 SPATA31A3Q5VYP0 1347 aa12.83□□□□□ -0.36
PMS2-202ENST00000380416 LRPPRCP42704 1394 aaKnown RBP12.82□□□□□ -0.36
PMS2-202ENST00000380416 CASZ1Q86V15 1759 aa12.82□□□□□ -0.36
PMS2-202ENST00000380416 FOXO3O43524 673 aa12.82□□□□□ -0.36
PMS2-202ENST00000380416 FAM98CQ17RN3 349 aaKnown RBP12.82□□□□□ -0.36
PMS2-202ENST00000380416 ZNF692Q9BU19 519 aaPredicted RBP12.82□□□□□ -0.36
PMS2-202ENST00000380416 MYOM1P52179 1685 aa12.81□□□□□ -0.36
PMS2-202ENST00000380416 ESCO1Q5FWF5 840 aa12.81□□□□□ -0.36
PMS2-202ENST00000380416 KIF1AQ12756 1690 aa12.8□□□□□ -0.36
PMS2-202ENST00000380416 ADGRF5Q8IZF2 1346 aa12.8□□□□□ -0.36
PMS2-202ENST00000380416 PIK3C2GO75747 1445 aa12.79□□□□□ -0.36
PMS2-202ENST00000380416 GIGYF1O75420 1035 aaPredicted RBP12.78□□□□□ -0.36
PMS2-202ENST00000380416 NBPF8Q3BBV2 869 aa12.78□□□□□ -0.36
PMS2-202ENST00000380416 NBPF14Q5TI25 921 aa12.78□□□□□ -0.36
PMS2-202ENST00000380416 TNS3Q68CZ2 1445 aa12.78□□□□□ -0.36
PMS2-202ENST00000380416 KNDC1Q76NI1 1749 aa12.77□□□□□ -0.36
PMS2-202ENST00000380416 TRIM37O94972 964 aa12.77□□□□□ -0.37
PMS2-202ENST00000380416 EVX2Q03828 476 aa12.76□□□□□ -0.37
PMS2-202ENST00000380416 COL14A1Q05707 1796 aaKnown RBP12.76□□□□□ -0.37
PMS2-202ENST00000380416 APBA3O96018 575 aa12.75□□□□□ -0.37
PMS2-202ENST00000380416 NRXN1Q9ULB1 1477 aa12.75□□□□□ -0.37
PMS2-202ENST00000380416 RGPD3A6NKT7 1758 aaPredicted RBP12.74□□□□□ -0.37
PMS2-202ENST00000380416 RGPD4Q7Z3J3 1758 aa12.74□□□□□ -0.37
PMS2-202ENST00000380416 FMN2Q9NZ56 1722 aa12.74□□□□□ -0.37
PMS2-202ENST00000380416 HAP1P54257 671 aaPredicted RBP12.74□□□□□ -0.37
PMS2-202ENST00000380416 FAM196AQ6ZSG2 479 aa12.74□□□□□ -0.37
PMS2-202ENST00000380416 CABLES1Q8TDN4 633 aa12.74□□□□□ -0.37
PMS2-202ENST00000380416 SHANK3Q9BYB0 1731 aa12.74□□□□□ -0.37
PMS2-202ENST00000380416 TECPR2O15040 1411 aa12.73□□□□□ -0.37
PMS2-202ENST00000380416 SPATA31A5Q5VU36 1347 aa12.73□□□□□ -0.37
PMS2-202ENST00000380416 SPATA31A7Q8IWB4 1347 aa12.73□□□□□ -0.37
PMS2-202ENST00000380416 FAM83GA6ND36 823 aa12.73□□□□□ -0.37
PMS2-202ENST00000380416 IFNLR1Q8IU57 520 aaPredicted RBP12.72□□□□□ -0.37
PMS2-202ENST00000380416 STK26Q9P289 416 aa12.72□□□□□ -0.37
PMS2-202ENST00000380416 DLC1Q96QB1 1528 aa12.72□□□□□ -0.37
PMS2-202ENST00000380416 YTHDC2Q9H6S0 1430 aaKnown RBP12.71□□□□□ -0.37
PMS2-202ENST00000380416 ABCC11Q96J66 1382 aa12.7□□□□□ -0.38
PMS2-202ENST00000380416 PTGER2P43116 358 aa12.7□□□□□ -0.38
PMS2-202ENST00000380416 TMEM132EQ6IEE7 984 aa12.7□□□□□ -0.38
PMS2-202ENST00000380416 C14orf93Q9H972 538 aaKnown RBP12.7□□□□□ -0.38
PMS2-202ENST00000380416 BTG4Q9NY30 223 aa12.7□□□□□ -0.38
PMS2-202ENST00000380416 DHX57Q6P158 1386 aaKnown RBP12.69□□□□□ -0.38
PMS2-202ENST00000380416 KRT28Q7Z3Y7 464 aa12.69□□□□□ -0.38
PMS2-202ENST00000380416 SYT17Q9BSW7 474 aa12.69□□□□□ -0.38
PMS2-202ENST00000380416 SBNO1A3KN83 1393 aa12.69□□□□□ -0.38
PMS2-202ENST00000380416 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
PMS2-202ENST00000380416 CFAP70Q5T0N1 1121 aa12.68□□□□□ -0.38
PMS2-202ENST00000380416 DCAF11Q8TEB1 546 aa12.68□□□□□ -0.38
PMS2-202ENST00000380416 RGPD8O14715 1765 aaPredicted RBP12.67□□□□□ -0.38
PMS2-202ENST00000380416 WAPLQ7Z5K2 1190 aa12.67□□□□□ -0.38
PMS2-202ENST00000380416 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
PMS2-202ENST00000380416 FHDC1Q9C0D6 1143 aaPredicted RBP12.67□□□□□ -0.38
PMS2-202ENST00000380416 KDM2AQ9Y2K7 1162 aa12.67□□□□□ -0.38
PMS2-202ENST00000380416 CRYBG1Q9Y4K1 1723 aa12.67□□□□□ -0.38
PMS2-202ENST00000380416 PLEKHH1Q9ULM0 1364 aa12.67□□□□□ -0.38
PMS2-202ENST00000380416 ADGRB1O14514 1584 aa12.66□□□□□ -0.38
PMS2-202ENST00000380416 NUTM2FA1L443 756 aa12.66□□□□□ -0.38
PMS2-202ENST00000380416 PDGFDQ9GZP0 370 aaPredicted RBP12.65□□□□□ -0.38
PMS2-202ENST00000380416 ANO8Q9HCE9 1232 aaPredicted RBP12.65□□□□□ -0.38
PMS2-202ENST00000380416 TRPM3Q9HCF6 1732 aaPredicted RBP12.65□□□□□ -0.38
PMS2-202ENST00000380416 ALS2Q96Q42 1657 aa12.64□□□□□ -0.39
PMS2-202ENST00000380416 PLEKHG5O94827 1062 aa12.64□□□□□ -0.39
PMS2-202ENST00000380416 ZBTB7AO95365 584 aa12.64□□□□□ -0.39
PMS2-202ENST00000380416 SIRT1Q96EB6 747 aa12.64□□□□□ -0.39
PMS2-202ENST00000380416 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
PMS2-202ENST00000380416 GOLGB1Q14789 3259 aaKnown RBP12.64□□□□□ -0.39
PMS2-202ENST00000380416 SPATA31A1Q5TZJ5 1347 aa12.63□□□□□ -0.39
PMS2-202ENST00000380416 PSME1Q06323 249 aa12.63□□□□□ -0.39
PMS2-202ENST00000380416 POGKQ9P215 609 aa12.63□□□□□ -0.39
PMS2-202ENST00000380416 KIAA1210Q9ULL0 1709 aa12.62□□□□□ -0.39
PMS2-202ENST00000380416 PRAM1Q96QH2 718 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms