RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 FILIP1LQ4L180 1135 aa12.43□□□□□ -0.42
CCDC85C-201ENST00000380243 MAP9Q49MG5 647 aa12.43□□□□□ -0.42
CCDC85C-201ENST00000380243 JAKMIP3Q5VZ66 844 aa12.42□□□□□ -0.42
CCDC85C-201ENST00000380243 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.42□□□□□ -0.42
CCDC85C-201ENST00000380243 RBM33Q96EV2 1170 aaKnown RBP12.42□□□□□ -0.42
CCDC85C-201ENST00000380243 POTEB2H3BUK9 544 aa12.42□□□□□ -0.42
CCDC85C-201ENST00000380243 IVLP07476 585 aa12.42□□□□□ -0.42
CCDC85C-201ENST00000380243 RBM25P49756 843 aaKnown RBP12.42□□□□□ -0.42
CCDC85C-201ENST00000380243 RIPK4P57078 832 aa12.42□□□□□ -0.42
CCDC85C-201ENST00000380243 HSP90AB4PQ58FF6 505 aa12.42□□□□□ -0.42
CCDC85C-201ENST00000380243 G3BP1Q13283 466 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCDC85C-201ENST00000380243 VPS53Q5VIR6 699 aa12.41□□□□□ -0.42
CCDC85C-201ENST00000380243 TICAM2Q86XR7 235 aa12.41□□□□□ -0.42
CCDC85C-201ENST00000380243 LMAN1P49257 510 aa12.41□□□□□ -0.42
CCDC85C-201ENST00000380243 MAP3K11Q16584 847 aa12.41□□□□□ -0.42
CCDC85C-201ENST00000380243 NUP62CLQ9H1M0 184 aa12.41□□□□□ -0.42
CCDC85C-201ENST00000380243 KIF20AO95235 890 aa12.41□□□□□ -0.42
CCDC85C-201ENST00000380243 IBSPP21815 317 aaPredicted RBP12.41□□□□□ -0.42
CCDC85C-201ENST00000380243 CT47A1Q5JQC4 288 aaPredicted RBP12.41□□□□□ -0.42
CCDC85C-201ENST00000380243 TNNT1P13805 278 aa12.4□□□□□ -0.42
CCDC85C-201ENST00000380243 GCC1Q96CN9 775 aa12.4□□□□□ -0.42
CCDC85C-201ENST00000380243 PIP4K2AP48426 406 aaPredicted RBP12.4□□□□□ -0.42
CCDC85C-201ENST00000380243 CRACR2AQ9BSW2 395 aa12.4□□□□□ -0.42
CCDC85C-201ENST00000380243 HSP90AB2PQ58FF8 381 aa12.4□□□□□ -0.42
CCDC85C-201ENST00000380243 NFXL1Q6ZNB6 911 aa12.4□□□□□ -0.42
CCDC85C-201ENST00000380243 LUZP1Q86V48 1076 aa12.4□□□□□ -0.42
CCDC85C-201ENST00000380243 ZFP91Q96JP5 570 aaPredicted RBP12.4□□□□□ -0.42
CCDC85C-201ENST00000380243 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.4□□□□□ -0.422e-6■■■■□ 21
CCDC85C-201ENST00000380243 MCM3P25205 808 aa12.4□□□□□ -0.42
CCDC85C-201ENST00000380243 KRT85P78386 507 aa12.4□□□□□ -0.42
CCDC85C-201ENST00000380243 DHX37Q8IY37 1157 aaKnown RBP12.4□□□□□ -0.42
CCDC85C-201ENST00000380243 C16orf45Q96MC5 204 aaPredicted RBP12.4□□□□□ -0.42
CCDC85C-201ENST00000380243 DNAAF4Q8WXU2 420 aa12.39□□□□□ -0.43
CCDC85C-201ENST00000380243 CASQ1P31415 396 aa12.39□□□□□ -0.43
CCDC85C-201ENST00000380243 UPF3BQ9BZI7 483 aaKnown RBP12.39□□□□□ -0.43
CCDC85C-201ENST00000380243 NF2P35240 595 aa12.39□□□□□ -0.43
CCDC85C-201ENST00000380243 RNF187Q5TA31 235 aaPredicted RBP12.39□□□□□ -0.43
CCDC85C-201ENST00000380243 ADCY5O95622 1261 aa12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 UVSSAQ2YD98 709 aa12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 JMYQ8N9B5 988 aa12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 OGFRQ9NZT2 677 aa12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 DHX16O60231 1041 aaKnown RBP12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 TRDNQ13061 729 aa12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 CCDC91Q7Z6B0 441 aa12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 CNTROBQ8N137 903 aa12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 STK38Q15208 465 aa12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 FAM177A1Q8N128 213 aaPredicted RBP12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 SLC26A8Q96RN1 970 aa12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 CEBPZQ03701 1054 aaKnown RBP12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 NEXNQ0ZGT2 675 aa12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 SPATA32Q96LK8 384 aa12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 FEZ1Q99689 392 aa12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 ME1P48163 572 aa12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 BRPF1P55201 1214 aaPredicted RBP12.38□□□□□ -0.43
CCDC85C-201ENST00000380243 LRRFIP2Q9Y608 721 aaKnown RBP12.37□□□□□ -0.43
CCDC85C-201ENST00000380243 CEP135Q66GS9 1140 aa12.37□□□□□ -0.43
CCDC85C-201ENST00000380243 MAGEC2Q9UBF1 373 aaPredicted RBP12.37□□□□□ -0.43
CCDC85C-201ENST00000380243 CLASRPQ8N2M8 674 aaKnown RBP12.37□□□□□ -0.43
CCDC85C-201ENST00000380243 WWC1Q8IX03 1113 aa12.37□□□□□ -0.43
CCDC85C-201ENST00000380243 C9orf78Q9NZ63 289 aaPredicted RBP12.37□□□□□ -0.43
CCDC85C-201ENST00000380243 CCDC88BA6NC98 1476 aa12.36□□□□□ -0.43
CCDC85C-201ENST00000380243 LARP1BQ659C4 914 aaKnown RBP12.36□□□□□ -0.43
CCDC85C-201ENST00000380243 ZSCAN23Q3MJ62 389 aa12.36□□□□□ -0.43
CCDC85C-201ENST00000380243 PANK2Q9BZ23 570 aa12.36□□□□□ -0.43
CCDC85C-201ENST00000380243 ARHGAP29Q52LW3 1261 aa12.36□□□□□ -0.43
CCDC85C-201ENST00000380243 CCDC148Q8NFR7 591 aa12.36□□□□□ -0.43
CCDC85C-201ENST00000380243 ZSCAN12O43309 604 aa12.36□□□□□ -0.43
CCDC85C-201ENST00000380243 EPS15P42566 896 aa12.36□□□□□ -0.43
CCDC85C-201ENST00000380243 SSFA2P28290 1259 aa12.36□□□□□ -0.43
CCDC85C-201ENST00000380243 GNAI1P63096 354 aa12.35□□□□□ -0.43
CCDC85C-201ENST00000380243 NOLC1Q14978 699 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCDC85C-201ENST00000380243 TTC31Q49AM3 519 aaPredicted RBP12.35□□□□□ -0.43
CCDC85C-201ENST00000380243 SMTNL1A8MU46 457 aa12.35□□□□□ -0.43
CCDC85C-201ENST00000380243 WASHC2CQ9Y4E1 1318 aa12.35□□□□□ -0.43
CCDC85C-201ENST00000380243 CYP46A1Q9Y6A2 500 aa12.35□□□□□ -0.43
CCDC85C-201ENST00000380243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCDC85C-201ENST00000380243 CLIP2Q9UDT6 1046 aa12.35□□□□□ -0.43
CCDC85C-201ENST00000380243 CFAP45Q9UL16 551 aa12.35□□□□□ -0.43
CCDC85C-201ENST00000380243 GBP2P32456 591 aaPredicted RBP12.35□□□□□ -0.43
CCDC85C-201ENST00000380243 NOB1Q9ULX3 412 aaKnown RBP12.35□□□□□ -0.43
CCDC85C-201ENST00000380243 CAVIN2O95810 425 aa12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 CAMK4Q16566 473 aa12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 ZSCAN31Q96LW9 406 aaPredicted RBP12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 GOLGA6L10A0A0M3HER8 536 aa12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 ZNF330Q9Y3S2 320 aaPredicted RBP12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 KIF5CO60282 957 aa12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 HIP1O00291 1037 aa12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 DACH1Q9UI36 760 aa12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 CHD1LQ86WJ1 897 aa12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 TERF1P54274 439 aa12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 GSDMDP57764 484 aa12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 PAXIP1Q6ZW49 1069 aaPredicted RBP12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 LUC7LQ9NQ29 371 aaKnown RBP12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 ANKRD1Q15327 319 aa12.34□□□□□ -0.43
CCDC85C-201ENST00000380243 BCAR3O75815 825 aa12.33□□□□□ -0.44
CCDC85C-201ENST00000380243 EPB41L2O43491 1005 aaKnown RBP12.33□□□□□ -0.44
CCDC85C-201ENST00000380243 SEPT7Q16181 437 aaKnown RBP12.33□□□□□ -0.44
CCDC85C-201ENST00000380243 MIA2Q96PC5 1412 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms