RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 C1orf115Q9H7X2 142 aa11.04□□□□□ -0.64
TRIM6-203ENST00000380107 RRAGDQ9NQL2 400 aaPredicted RBP11.04□□□□□ -0.64
TRIM6-203ENST00000380107 GLI2P10070 1586 aa11.04□□□□□ -0.64
TRIM6-203ENST00000380107 THUMPD2Q9BTF0 503 aaKnown RBP11.04□□□□□ -0.64
TRIM6-203ENST00000380107 ELL2O00472 640 aaPredicted RBP11.03□□□□□ -0.64
TRIM6-203ENST00000380107 FYB1O15117 783 aa11.03□□□□□ -0.64
TRIM6-203ENST00000380107 MCM4P33991 863 aa11.03□□□□□ -0.64
TRIM6-203ENST00000380107 FOXD4L1Q9NU39 408 aa11.03□□□□□ -0.64
TRIM6-203ENST00000380107 XRCC6P12956 609 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRIM6-203ENST00000380107 IDI1Q13907 227 aa11.02□□□□□ -0.65
TRIM6-203ENST00000380107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRIM6-203ENST00000380107 FAM43AQ8N2R8 423 aa11.02□□□□□ -0.65
TRIM6-203ENST00000380107 PIAS4Q8N2W9 510 aaPredicted RBP11.02□□□□□ -0.65
TRIM6-203ENST00000380107 DDX19BQ9UMR2 479 aa11.02□□□□□ -0.65
TRIM6-203ENST00000380107 CAMSAP1Q5T5Y3 1602 aa11.01□□□□□ -0.65
TRIM6-203ENST00000380107 ARHGEF28Q8N1W1 1705 aaKnown RBP11.01□□□□□ -0.65
TRIM6-203ENST00000380107 SIGLEC1Q9BZZ2 1709 aa11.01□□□□□ -0.65
TRIM6-203ENST00000380107 AAMPQ13685 434 aa11.01□□□□□ -0.65
TRIM6-203ENST00000380107 PRAM1Q96QH2 718 aa11.01□□□□□ -0.65
TRIM6-203ENST00000380107 VGFO15240 615 aaPredicted RBP11.01□□□□□ -0.65
TRIM6-203ENST00000380107 HMOX1P09601 288 aa11.01□□□□□ -0.65
TRIM6-203ENST00000380107 FRMPD1Q5SYB0 1578 aa11.01□□□□□ -0.65
TRIM6-203ENST00000380107 HDAC1Q13547 482 aaPredicted RBP11□□□□□ -0.65
TRIM6-203ENST00000380107 ZBTB40Q9NUA8 1239 aa11□□□□□ -0.65
TRIM6-203ENST00000380107 ADGRB2O60241 1585 aa11□□□□□ -0.65
TRIM6-203ENST00000380107 GOLGA6L3A6NEY3 463 aa10.99□□□□□ -0.65
TRIM6-203ENST00000380107 TRAK2O60296 914 aa10.99□□□□□ -0.65
TRIM6-203ENST00000380107 CYB5RLQ6IPT4 315 aa10.99□□□□□ -0.65
TRIM6-203ENST00000380107 SMC5Q8IY18 1101 aa10.99□□□□□ -0.65
TRIM6-203ENST00000380107 LMTK2Q8IWU2 1503 aa10.99□□□□□ -0.65
TRIM6-203ENST00000380107 DIAPH1O60610 1272 aaKnown RBP10.99□□□□□ -0.65
TRIM6-203ENST00000380107 HSCBQ8IWL3 235 aa10.99□□□□□ -0.65
TRIM6-203ENST00000380107 CABP1Q9NZU7 370 aa10.99□□□□□ -0.65
TRIM6-203ENST00000380107 CHMP5Q9NZZ3 219 aa10.99□□□□□ -0.65
TRIM6-203ENST00000380107 USP32Q8NFA0 1604 aa10.99□□□□□ -0.65
TRIM6-203ENST00000380107 ABCC11Q96J66 1382 aa10.98□□□□□ -0.65
TRIM6-203ENST00000380107 PRKAR2BP31323 418 aa10.98□□□□□ -0.65
TRIM6-203ENST00000380107 TSPYL6Q8N831 410 aa10.98□□□□□ -0.65
TRIM6-203ENST00000380107 RPGRIP1LQ68CZ1 1315 aa10.98□□□□□ -0.65
TRIM6-203ENST00000380107 CD2BP2O95400 341 aaKnown RBP10.98□□□□□ -0.65
TRIM6-203ENST00000380107 ANKRD45Q5TZF3 282 aa10.98□□□□□ -0.65
TRIM6-203ENST00000380107 PHACTR3Q96KR7 559 aa10.98□□□□□ -0.65
TRIM6-203ENST00000380107 RBM42Q9BTD8 480 aaKnown RBP10.98□□□□□ -0.65
TRIM6-203ENST00000380107 ABCC3O15438 1527 aa10.97□□□□□ -0.65
TRIM6-203ENST00000380107 L1TD1Q5T7N2 865 aaKnown RBP10.97□□□□□ -0.65
TRIM6-203ENST00000380107 COL3A1P02461 1466 aaPredicted RBP10.97□□□□□ -0.65
TRIM6-203ENST00000380107 NSD2O96028 1365 aa10.97□□□□□ -0.65
TRIM6-203ENST00000380107 NPM1P06748 294 aaKnown RBP eCLIP10.97□□□□□ -0.65
TRIM6-203ENST00000380107 CHD1LQ86WJ1 897 aa10.97□□□□□ -0.65
TRIM6-203ENST00000380107 NEXMIFQ5QGS0 1516 aa10.97□□□□□ -0.65
TRIM6-203ENST00000380107 MYO5BQ9ULV0 1848 aa10.97□□□□□ -0.65
TRIM6-203ENST00000380107 NUCB1Q02818 461 aa10.96□□□□□ -0.65
TRIM6-203ENST00000380107 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
TRIM6-203ENST00000380107 CT47B1P0C2W7 299 aaPredicted RBP10.96□□□□□ -0.66
TRIM6-203ENST00000380107 FBXO31Q5XUX0 539 aaPredicted RBP10.96□□□□□ -0.66
TRIM6-203ENST00000380107 CDK19Q9BWU1 502 aa10.96□□□□□ -0.66
TRIM6-203ENST00000380107 TERF2IPQ9NYB0 399 aa10.96□□□□□ -0.66
TRIM6-203ENST00000380107 POGZQ7Z3K3 1410 aa10.96□□□□□ -0.66
TRIM6-203ENST00000380107 ATAD2Q6PL18 1390 aa10.96□□□□□ -0.66
TRIM6-203ENST00000380107 HECW2Q9P2P5 1572 aa10.95□□□□□ -0.66
TRIM6-203ENST00000380107 ZMYM3Q14202 1370 aa10.95□□□□□ -0.66
TRIM6-203ENST00000380107 KIF16BQ96L93 1317 aa10.95□□□□□ -0.66
TRIM6-203ENST00000380107 FSD2A1L4K1 749 aa10.95□□□□□ -0.66
TRIM6-203ENST00000380107 IPO8O15397 1037 aaKnown RBP10.95□□□□□ -0.66
TRIM6-203ENST00000380107 WAPLQ7Z5K2 1190 aa10.95□□□□□ -0.66
TRIM6-203ENST00000380107 ZRANB1Q9UGI0 708 aa10.95□□□□□ -0.66
TRIM6-203ENST00000380107 AK9Q5TCS8 1911 aa10.95□□□□□ -0.66
TRIM6-203ENST00000380107 CD163L1Q9NR16 1453 aa10.94□□□□□ -0.66
TRIM6-203ENST00000380107 HSP90AB1P08238 724 aaKnown RBP10.94□□□□□ -0.66
TRIM6-203ENST00000380107 TNPO1Q92973 898 aaKnown RBP10.94□□□□□ -0.66
TRIM6-203ENST00000380107 EMILIN1Q9Y6C2 1016 aa10.94□□□□□ -0.66
TRIM6-203ENST00000380107 FAM83GA6ND36 823 aa10.93□□□□□ -0.66
TRIM6-203ENST00000380107 DCTN1Q14203 1278 aa10.93□□□□□ -0.66
TRIM6-203ENST00000380107 SIRT2Q8IXJ6 389 aa10.93□□□□□ -0.66
TRIM6-203ENST00000380107 RSPH6AQ9H0K4 717 aa10.93□□□□□ -0.66
TRIM6-203ENST00000380107 PPIP5K1Q6PFW1 1433 aa10.93□□□□□ -0.66
TRIM6-203ENST00000380107 ZBTB7BO15156 539 aaPredicted RBP10.93□□□□□ -0.66
TRIM6-203ENST00000380107 HSP90AA1P07900 732 aaKnown RBP10.93□□□□□ -0.66
TRIM6-203ENST00000380107 HDGFL2Q7Z4V5 671 aaPredicted RBP10.93□□□□□ -0.66
TRIM6-203ENST00000380107 KIF2CQ99661 725 aa10.93□□□□□ -0.66
TRIM6-203ENST00000380107 POLKQ9UBT6 870 aa10.93□□□□□ -0.66
TRIM6-203ENST00000380107 LRRC7Q96NW7 1537 aa10.92□□□□□ -0.66
TRIM6-203ENST00000380107 IL16Q14005 1332 aa10.92□□□□□ -0.66
TRIM6-203ENST00000380107 NCKAP5LQ9HCH0 1330 aa10.92□□□□□ -0.66
TRIM6-203ENST00000380107 VAMP4O75379 141 aa10.92□□□□□ -0.66
TRIM6-203ENST00000380107 RBM25P49756 843 aaKnown RBP10.92□□□□□ -0.66
TRIM6-203ENST00000380107 TBC1D9Q6ZT07 1266 aa10.92□□□□□ -0.66
TRIM6-203ENST00000380107 GAS2L3Q86XJ1 694 aa10.92□□□□□ -0.66
TRIM6-203ENST00000380107 PUS7Q96PZ0 661 aaKnown RBP10.92□□□□□ -0.66
TRIM6-203ENST00000380107 PIK3C2BO00750 1634 aa10.92□□□□□ -0.66
TRIM6-203ENST00000380107 PTPRMP28827 1452 aa10.91□□□□□ -0.66
TRIM6-203ENST00000380107 APBB1O00213 710 aa10.91□□□□□ -0.66
TRIM6-203ENST00000380107 MLH3Q9UHC1 1453 aa10.91□□□□□ -0.66
TRIM6-203ENST00000380107 FCHSD2O94868 740 aa10.91□□□□□ -0.66
TRIM6-203ENST00000380107 NCBP3Q53F19 620 aaKnown RBP10.91□□□□□ -0.66
TRIM6-203ENST00000380107 MRPL50Q8N5N7 158 aaKnown RBP10.91□□□□□ -0.66
TRIM6-203ENST00000380107 MBIPQ9NS73 344 aa10.91□□□□□ -0.66
TRIM6-203ENST00000380107 STAG3Q9UJ98 1225 aa10.91□□□□□ -0.66
TRIM6-203ENST00000380107 DDIT3P35638 169 aa10.9□□□□□ -0.66
TRIM6-203ENST00000380107 RRS1Q15050 365 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms