RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 STRCQ7RTU9 1775 aa23.42■■□□□ 1.34
LYSMD4-203ENST00000378904 PMFBP1Q8TBY8 1022 aa23.41■■□□□ 1.34
LYSMD4-203ENST00000378904 SUPT16HQ9Y5B9 1047 aaKnown RBP23.41■■□□□ 1.34
LYSMD4-203ENST00000378904 STRCP1A6NGW2 1772 aa23.4■■□□□ 1.34
LYSMD4-203ENST00000378904 CFAP53Q96M91 514 aa23.39■■□□□ 1.34
LYSMD4-203ENST00000378904 TTC21BQ7Z4L5 1316 aa23.38■■□□□ 1.33
LYSMD4-203ENST00000378904 C14orf37Q86TY3 774 aa23.38■■□□□ 1.33
LYSMD4-203ENST00000378904 PROSER2Q86WR7 435 aaPredicted RBP23.38■■□□□ 1.33
LYSMD4-203ENST00000378904 MAP2P11137 1827 aaKnown RBP23.38■■□□□ 1.33
LYSMD4-203ENST00000378904 NGDNQ8NEJ9 315 aaKnown RBP23.37■■□□□ 1.33
LYSMD4-203ENST00000378904 ZRANB1Q9UGI0 708 aa23.37■■□□□ 1.33
LYSMD4-203ENST00000378904 SSH2Q76I76 1423 aa23.36■■□□□ 1.33
LYSMD4-203ENST00000378904 COG3Q96JB2 828 aa23.35■■□□□ 1.33
LYSMD4-203ENST00000378904 SALL2Q9Y467 1007 aaPredicted RBP23.33■■□□□ 1.32
LYSMD4-203ENST00000378904 COL3A1P02461 1466 aaPredicted RBP23.32■■□□□ 1.32
LYSMD4-203ENST00000378904 TTC21AQ8NDW8 1320 aa23.31■■□□□ 1.32
LYSMD4-203ENST00000378904 FBLN1P23142 703 aa23.31■■□□□ 1.32
LYSMD4-203ENST00000378904 PHF8Q9UPP1 1060 aa23.3■■□□□ 1.32
LYSMD4-203ENST00000378904 AATKQ6ZMQ8 1374 aa23.3■■□□□ 1.32
LYSMD4-203ENST00000378904 OVOS2A0A0J9YW53 1432 aa23.3■■□□□ 1.32
LYSMD4-203ENST00000378904 OVOS2Q6IE36 1432 aa23.3■■□□□ 1.32
LYSMD4-203ENST00000378904 CCDC146Q8IYE0 955 aa23.3■■□□□ 1.32
LYSMD4-203ENST00000378904 POLKQ9UBT6 870 aa23.3■■□□□ 1.32
LYSMD4-203ENST00000378904 PNPLA6Q8IY17 1366 aa23.29■■□□□ 1.32
LYSMD4-203ENST00000378904 TMEM94Q12767 1356 aa23.28■■□□□ 1.32
LYSMD4-203ENST00000378904 PIK3C2AO00443 1686 aa23.27■■□□□ 1.32
LYSMD4-203ENST00000378904 C19orf44Q9H6X5 657 aa23.27■■□□□ 1.32
LYSMD4-203ENST00000378904 SMG6Q86US8 1419 aaKnown RBP23.27■■□□□ 1.32
LYSMD4-203ENST00000378904 ESCO1Q5FWF5 840 aa23.27■■□□□ 1.32
LYSMD4-203ENST00000378904 NCOA3Q9Y6Q9 1424 aa23.26■■□□□ 1.31
LYSMD4-203ENST00000378904 EMILIN1Q9Y6C2 1016 aa23.25■■□□□ 1.31
LYSMD4-203ENST00000378904 PPM1GO15355 546 aaPredicted RBP23.24■■□□□ 1.31
LYSMD4-203ENST00000378904 NUDCQ9Y266 331 aa23.24■■□□□ 1.31
LYSMD4-203ENST00000378904 DIAPH1O60610 1272 aaKnown RBP23.23■■□□□ 1.31
LYSMD4-203ENST00000378904 PDE3BQ13370 1112 aa23.23■■□□□ 1.31
LYSMD4-203ENST00000378904 CDK12Q9NYV4 1490 aaPredicted RBP23.23■■□□□ 1.31
LYSMD4-203ENST00000378904 USP31Q70CQ4 1352 aa23.23■■□□□ 1.31
LYSMD4-203ENST00000378904 XIRP1Q702N8 1843 aaKnown RBP23.23■■□□□ 1.31
LYSMD4-203ENST00000378904 APAF1O14727 1248 aa23.23■■□□□ 1.31
LYSMD4-203ENST00000378904 U2AF1L5P0DN76 240 aaPredicted RBP23.23■■□□□ 1.31
LYSMD4-203ENST00000378904 U2AF1Q01081 240 aaKnown RBP eCLIP23.23■■□□□ 1.31
LYSMD4-203ENST00000378904 RRS1Q15050 365 aaKnown RBP23.22■■□□□ 1.31
LYSMD4-203ENST00000378904 ORAI2Q96SN7 254 aa23.21■■□□□ 1.31
LYSMD4-203ENST00000378904 USP54Q70EL1 1684 aa23.21■■□□□ 1.31
LYSMD4-203ENST00000378904 DCCP43146 1447 aa23.21■■□□□ 1.31
LYSMD4-203ENST00000378904 MARF1Q9Y4F3 1742 aaKnown RBP23.21■■□□□ 1.31
LYSMD4-203ENST00000378904 C1orf167Q5SNV9 1468 aa23.2■■□□□ 1.31
LYSMD4-203ENST00000378904 U2SURPO15042 1029 aaKnown RBP23.2■■□□□ 1.3
LYSMD4-203ENST00000378904 RUNDC1Q96C34 613 aa23.2■■□□□ 1.3
LYSMD4-203ENST00000378904 KIF1AQ12756 1690 aa23.19■■□□□ 1.3
LYSMD4-203ENST00000378904 ATF3P18847 181 aa23.19■■□□□ 1.3
LYSMD4-203ENST00000378904 PAK3O75914 559 aaPredicted RBP23.18■■□□□ 1.3
LYSMD4-203ENST00000378904 PSME1Q06323 249 aa23.18■■□□□ 1.3
LYSMD4-203ENST00000378904 TSHZ2Q9NRE2 1034 aa23.18■■□□□ 1.3
LYSMD4-203ENST00000378904 MST1RQ04912 1400 aa23.18■■□□□ 1.3
LYSMD4-203ENST00000378904 IQSEC2Q5JU85 1478 aa23.17■■□□□ 1.3
LYSMD4-203ENST00000378904 ZNF521Q96K83 1311 aa23.17■■□□□ 1.3
LYSMD4-203ENST00000378904 NLRP6P59044 892 aa23.17■■□□□ 1.3
LYSMD4-203ENST00000378904 CDCA7LQ96GN5 454 aa23.17■■□□□ 1.3
LYSMD4-203ENST00000378904 ZNF335Q9H4Z2 1342 aaPredicted RBP23.16■■□□□ 1.3
LYSMD4-203ENST00000378904 ABTB2Q8N961 1025 aa23.16■■□□□ 1.3
LYSMD4-203ENST00000378904 NGEFQ8N5V2 710 aa23.15■■□□□ 1.3
LYSMD4-203ENST00000378904 PEAK1Q9H792 1746 aa23.15■■□□□ 1.3
LYSMD4-203ENST00000378904 LRRC7Q96NW7 1537 aa23.15■■□□□ 1.3
LYSMD4-203ENST00000378904 MSH6P52701 1360 aa23.15■■□□□ 1.3
LYSMD4-203ENST00000378904 SOX12O15370 315 aa23.14■■□□□ 1.3
LYSMD4-203ENST00000378904 FOXO3O43524 673 aa23.14■■□□□ 1.29
LYSMD4-203ENST00000378904 NUTM2GQ5VZR2 741 aa23.14■■□□□ 1.29
LYSMD4-203ENST00000378904 CADPS2Q86UW7 1296 aa23.14■■□□□ 1.29
LYSMD4-203ENST00000378904 TCP11L2Q8N4U5 519 aa23.14■■□□□ 1.29
LYSMD4-203ENST00000378904 IL13P35225 146 aa23.12■■□□□ 1.29
LYSMD4-203ENST00000378904 NEFLP07196 543 aa23.12■■□□□ 1.29
LYSMD4-203ENST00000378904 PLEKHF1Q96S99 279 aa23.12■■□□□ 1.29
LYSMD4-203ENST00000378904 TRPM3Q9HCF6 1732 aaPredicted RBP23.11■■□□□ 1.29
LYSMD4-203ENST00000378904 GOLGA2Q08379 1002 aa23.1■■□□□ 1.29
LYSMD4-203ENST00000378904 DMRT2Q9Y5R5 561 aa23.1■■□□□ 1.29
LYSMD4-203ENST00000378904 MAP3K19Q56UN5 1328 aa23.09■■□□□ 1.29
LYSMD4-203ENST00000378904 XPCQ01831 940 aaPredicted RBP23.09■■□□□ 1.29
LYSMD4-203ENST00000378904 FKBP8Q14318 412 aa23.09■■□□□ 1.29
LYSMD4-203ENST00000378904 RRP7AQ9Y3A4 280 aaKnown RBP23.09■■□□□ 1.29
LYSMD4-203ENST00000378904 FCHSD2O94868 740 aa23.08■■□□□ 1.29
LYSMD4-203ENST00000378904 NEUROD2Q15784 382 aa23.08■■□□□ 1.29
LYSMD4-203ENST00000378904 PNNQ9H307 717 aaKnown RBP23.08■■□□□ 1.29
LYSMD4-203ENST00000378904 SBNO1A3KN83 1393 aa23.07■■□□□ 1.28
LYSMD4-203ENST00000378904 MAPK8IP3Q9UPT6 1336 aa23.07■■□□□ 1.28
LYSMD4-203ENST00000378904 KRT28Q7Z3Y7 464 aa23.06■■□□□ 1.28
LYSMD4-203ENST00000378904 WWC1Q8IX03 1113 aa23.06■■□□□ 1.28
LYSMD4-203ENST00000378904 HSP90AB2PQ58FF8 381 aa23.06■■□□□ 1.28
LYSMD4-203ENST00000378904 RSPH6AQ9H0K4 717 aa23.06■■□□□ 1.28
LYSMD4-203ENST00000378904 FLT4P35916 1363 aa23.06■■□□□ 1.28
LYSMD4-203ENST00000378904 EIF4A2Q14240 407 aaKnown RBP23.05■■□□□ 1.28
LYSMD4-203ENST00000378904 NCBP3Q53F19 620 aaKnown RBP23.05■■□□□ 1.28
LYSMD4-203ENST00000378904 PHF23Q9BUL5 403 aaPredicted RBP23.05■■□□□ 1.28
LYSMD4-203ENST00000378904 LTN1O94822 1766 aa23.04■■□□□ 1.28
LYSMD4-203ENST00000378904 HMOX1P09601 288 aa23.04■■□□□ 1.28
LYSMD4-203ENST00000378904 SLFN5Q08AF3 891 aa23.04■■□□□ 1.28
LYSMD4-203ENST00000378904 CCDC27Q2M243 656 aa23.04■■□□□ 1.28
LYSMD4-203ENST00000378904 PRKAR2BP31323 418 aa23.03■■□□□ 1.28
LYSMD4-203ENST00000378904 AMPHP49418 695 aa23.03■■□□□ 1.28
LYSMD4-203ENST00000378904 DUSP27Q5VZP5 1158 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms