RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 NME9Q86XW9 330 aa19.36■□□□□ 0.69
RAB3IP-203ENST00000378809 WWC1Q8IX03 1113 aa19.36■□□□□ 0.69
RAB3IP-203ENST00000378809 CDC42BPGQ6DT37 1551 aa19.35■□□□□ 0.69
RAB3IP-203ENST00000378809 FBLN1P23142 703 aa19.35■□□□□ 0.69
RAB3IP-203ENST00000378809 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.35■□□□□ 0.69
RAB3IP-203ENST00000378809 EXOC6Q8TAG9 804 aa19.34■□□□□ 0.69
RAB3IP-203ENST00000378809 DMRT2Q9Y5R5 561 aa19.34■□□□□ 0.69
RAB3IP-203ENST00000378809 DIAPH1O60610 1272 aaKnown RBP19.34■□□□□ 0.69
RAB3IP-203ENST00000378809 ZNF692Q9BU19 519 aaPredicted RBP19.34■□□□□ 0.69
RAB3IP-203ENST00000378809 ADGRB2O60241 1585 aa19.33■□□□□ 0.69
RAB3IP-203ENST00000378809 IQSEC2Q5JU85 1478 aa19.33■□□□□ 0.68
RAB3IP-203ENST00000378809 TRMT2AQ8IZ69 625 aaKnown RBP19.32■□□□□ 0.68
RAB3IP-203ENST00000378809 COG3Q96JB2 828 aa19.32■□□□□ 0.68
RAB3IP-203ENST00000378809 ZRANB1Q9UGI0 708 aa19.32■□□□□ 0.68
RAB3IP-203ENST00000378809 DIP2AQ14689 1571 aa19.32■□□□□ 0.68
RAB3IP-203ENST00000378809 COL3A1P02461 1466 aaPredicted RBP19.32■□□□□ 0.68
RAB3IP-203ENST00000378809 PTCH1Q13635 1447 aa19.32■□□□□ 0.68
RAB3IP-203ENST00000378809 NKTRP30414 1462 aaKnown RBP19.32■□□□□ 0.68
RAB3IP-203ENST00000378809 POLKQ9UBT6 870 aa19.31■□□□□ 0.68
RAB3IP-203ENST00000378809 ACEP12821 1306 aa19.3■□□□□ 0.68
RAB3IP-203ENST00000378809 MAPK8IP3Q9UPT6 1336 aa19.3■□□□□ 0.68
RAB3IP-203ENST00000378809 ANKLE2Q86XL3 938 aa19.3■□□□□ 0.68
RAB3IP-203ENST00000378809 PNPLA6Q8IY17 1366 aa19.29■□□□□ 0.68
RAB3IP-203ENST00000378809 KCNA6P17658 529 aa19.29■□□□□ 0.68
RAB3IP-203ENST00000378809 ITSN1Q15811 1721 aa19.28■□□□□ 0.68
RAB3IP-203ENST00000378809 EMILIN1Q9Y6C2 1016 aa19.28■□□□□ 0.68
RAB3IP-203ENST00000378809 MON2Q7Z3U7 1717 aa19.28■□□□□ 0.68
RAB3IP-203ENST00000378809 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.27■□□□□ 0.68
RAB3IP-203ENST00000378809 ADAMTSL3P82987 1691 aa19.26■□□□□ 0.67
RAB3IP-203ENST00000378809 PLEKHG3A1L390 1219 aa19.26■□□□□ 0.67
RAB3IP-203ENST00000378809 CCDC27Q2M243 656 aa19.26■□□□□ 0.67
RAB3IP-203ENST00000378809 WDR63Q8IWG1 891 aa19.26■□□□□ 0.67
RAB3IP-203ENST00000378809 PMFBP1Q8TBY8 1022 aa19.26■□□□□ 0.67
RAB3IP-203ENST00000378809 PLEKHF1Q96S99 279 aa19.26■□□□□ 0.67
RAB3IP-203ENST00000378809 TTC21BQ7Z4L5 1316 aa19.25■□□□□ 0.67
RAB3IP-203ENST00000378809 CRBNQ96SW2 442 aa19.25■□□□□ 0.67
RAB3IP-203ENST00000378809 RRS1Q15050 365 aaKnown RBP19.25■□□□□ 0.67
RAB3IP-203ENST00000378809 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
RAB3IP-203ENST00000378809 PNNQ9H307 717 aaKnown RBP19.25■□□□□ 0.67
RAB3IP-203ENST00000378809 AKAP12Q02952 1782 aa19.24■□□□□ 0.67
RAB3IP-203ENST00000378809 C20orf194Q5TEA3 1177 aa19.24■□□□□ 0.67
RAB3IP-203ENST00000378809 PIK3R4Q99570 1358 aa19.24■□□□□ 0.67
RAB3IP-203ENST00000378809 TOPAZ1Q8N9V7 1692 aa19.23■□□□□ 0.67
RAB3IP-203ENST00000378809 TMPOP42166 694 aaKnown RBP19.23■□□□□ 0.67
RAB3IP-203ENST00000378809 NGDNQ8NEJ9 315 aaKnown RBP19.23■□□□□ 0.67
RAB3IP-203ENST00000378809 USP6P35125 1406 aa19.23■□□□□ 0.67
RAB3IP-203ENST00000378809 AATKQ6ZMQ8 1374 aa19.23■□□□□ 0.67
RAB3IP-203ENST00000378809 XRN1Q8IZH2 1706 aaKnown RBP19.22■□□□□ 0.67
RAB3IP-203ENST00000378809 NEFMP07197 916 aa19.22■□□□□ 0.67
RAB3IP-203ENST00000378809 BCAR3O75815 825 aa19.22■□□□□ 0.67
RAB3IP-203ENST00000378809 NCBP3Q53F19 620 aaKnown RBP19.21■□□□□ 0.67
RAB3IP-203ENST00000378809 MYH16Q9H6N6 1097 aa19.21■□□□□ 0.67
RAB3IP-203ENST00000378809 ZNF142P52746 1687 aaPredicted RBP19.21■□□□□ 0.67
RAB3IP-203ENST00000378809 FCHSD2O94868 740 aa19.2■□□□□ 0.66
RAB3IP-203ENST00000378809 HMOX1P09601 288 aa19.2■□□□□ 0.66
RAB3IP-203ENST00000378809 PRKAR2BP31323 418 aa19.2■□□□□ 0.66
RAB3IP-203ENST00000378809 CDK12Q9NYV4 1490 aaPredicted RBP19.2■□□□□ 0.66
RAB3IP-203ENST00000378809 MAP2P11137 1827 aaKnown RBP19.19■□□□□ 0.66
RAB3IP-203ENST00000378809 RIPK4P57078 832 aa19.19■□□□□ 0.66
RAB3IP-203ENST00000378809 SOX12O15370 315 aa19.18■□□□□ 0.66
RAB3IP-203ENST00000378809 CANXP27824 592 aaKnown RBP19.18■□□□□ 0.66
RAB3IP-203ENST00000378809 RSPH6AQ9H0K4 717 aa19.18■□□□□ 0.66
RAB3IP-203ENST00000378809 NRKQ7Z2Y5 1582 aa19.17■□□□□ 0.66
RAB3IP-203ENST00000378809 IL13P35225 146 aa19.17■□□□□ 0.66
RAB3IP-203ENST00000378809 RBM33Q96EV2 1170 aaKnown RBP19.17■□□□□ 0.66
RAB3IP-203ENST00000378809 RBM19Q9Y4C8 960 aaKnown RBP19.17■□□□□ 0.66
RAB3IP-203ENST00000378809 LRRC7Q96NW7 1537 aa19.17■□□□□ 0.66
RAB3IP-203ENST00000378809 TRIM35Q9UPQ4 493 aa19.17■□□□□ 0.66
RAB3IP-203ENST00000378809 OVOS2A0A0J9YW53 1432 aa19.15■□□□□ 0.66
RAB3IP-203ENST00000378809 OVOS2Q6IE36 1432 aa19.15■□□□□ 0.66
RAB3IP-203ENST00000378809 TSR2Q969E8 191 aaKnown RBP19.15■□□□□ 0.66
RAB3IP-203ENST00000378809 TTC21AQ8NDW8 1320 aa19.15■□□□□ 0.66
RAB3IP-203ENST00000378809 ANKARQ7Z5J8 1434 aa19.14■□□□□ 0.65
RAB3IP-203ENST00000378809 FRAT1Q92837 279 aaPredicted RBP19.13■□□□□ 0.65
RAB3IP-203ENST00000378809 NPHP4O75161 1426 aaPredicted RBP19.13■□□□□ 0.65
RAB3IP-203ENST00000378809 SETD1BQ9UPS6 1966 aaKnown RBP19.13■□□□□ 0.65
RAB3IP-203ENST00000378809 SSH2Q76I76 1423 aa19.13■□□□□ 0.65
RAB3IP-203ENST00000378809 RARSP54136 660 aaKnown RBP19.12■□□□□ 0.65
RAB3IP-203ENST00000378809 FANCIQ9NVI1 1328 aa19.12■□□□□ 0.65
RAB3IP-203ENST00000378809 C14orf37Q86TY3 774 aa19.12■□□□□ 0.65
RAB3IP-203ENST00000378809 PHACTR3Q96KR7 559 aa19.12■□□□□ 0.65
RAB3IP-203ENST00000378809 BCL2L13Q9BXK5 485 aa19.12■□□□□ 0.65
RAB3IP-203ENST00000378809 RGPD8O14715 1765 aaPredicted RBP19.11■□□□□ 0.65
RAB3IP-203ENST00000378809 PAK3O75914 559 aaPredicted RBP19.1■□□□□ 0.65
RAB3IP-203ENST00000378809 NFE2L2Q16236 605 aa19.1■□□□□ 0.65
RAB3IP-203ENST00000378809 USP31Q70CQ4 1352 aa19.09■□□□□ 0.65
RAB3IP-203ENST00000378809 IL16Q14005 1332 aa19.09■□□□□ 0.65
RAB3IP-203ENST00000378809 CHD2O14647 1828 aaKnown RBP19.09■□□□□ 0.65
RAB3IP-203ENST00000378809 EIF4A2Q14240 407 aaKnown RBP19.09■□□□□ 0.65
RAB3IP-203ENST00000378809 FMN2Q9NZ56 1722 aa19.08■□□□□ 0.65
RAB3IP-203ENST00000378809 NLRP6P59044 892 aa19.08■□□□□ 0.64
RAB3IP-203ENST00000378809 EXOSC9Q06265 439 aaKnown RBP19.08■□□□□ 0.64
RAB3IP-203ENST00000378809 LAS1LQ9Y4W2 734 aaKnown RBP19.08■□□□□ 0.64
RAB3IP-203ENST00000378809 HSP90AB2PQ58FF8 381 aa19.07■□□□□ 0.64
RAB3IP-203ENST00000378809 NUTM2GQ5VZR2 741 aa19.07■□□□□ 0.64
RAB3IP-203ENST00000378809 NALCNQ8IZF0 1738 aa19.07■□□□□ 0.64
RAB3IP-203ENST00000378809 PDE3AQ14432 1141 aa19.07■□□□□ 0.64
RAB3IP-203ENST00000378809 SULT6B1Q6IMI4 303 aa19.06■□□□□ 0.64
RAB3IP-203ENST00000378809 PANK1Q8TE04 598 aa19.06■□□□□ 0.64
RAB3IP-203ENST00000378809 PHF8Q9UPP1 1060 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms