RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 SHPRHQ149N8 1683 aa25.56■■□□□ 1.68
SSU72-204ENST00000378726 XRN1Q8IZH2 1706 aaKnown RBP25.56■■□□□ 1.68
SSU72-204ENST00000378726 RNF123Q5XPI4 1314 aa25.55■■□□□ 1.68
SSU72-204ENST00000378726 FBLN1P23142 703 aa25.55■■□□□ 1.68
SSU72-204ENST00000378726 RUNDC1Q96C34 613 aa25.55■■□□□ 1.68
SSU72-204ENST00000378726 ZRANB1Q9UGI0 708 aa25.55■■□□□ 1.68
SSU72-204ENST00000378726 KIF20BQ96Q89 1820 aa25.55■■□□□ 1.68
SSU72-204ENST00000378726 U2AF1L5P0DN76 240 aaPredicted RBP25.55■■□□□ 1.68
SSU72-204ENST00000378726 U2AF1Q01081 240 aaKnown RBP eCLIP25.55■■□□□ 1.681e-6■□□□□ 10.2
SSU72-204ENST00000378726 GOLGA2Q08379 1002 aa25.54■■□□□ 1.68
SSU72-204ENST00000378726 NGEFQ8N5V2 710 aa25.54■■□□□ 1.68
SSU72-204ENST00000378726 COG3Q96JB2 828 aa25.53■■□□□ 1.68
SSU72-204ENST00000378726 POLKQ9UBT6 870 aa25.53■■□□□ 1.68
SSU72-204ENST00000378726 RCAN3Q9UKA8 241 aa25.53■■□□□ 1.68
SSU72-204ENST00000378726 PMFBP1Q8TBY8 1022 aa25.51■■□□□ 1.67
SSU72-204ENST00000378726 NPHP4O75161 1426 aaPredicted RBP25.51■■□□□ 1.67
SSU72-204ENST00000378726 TTC21BQ7Z4L5 1316 aa25.5■■□□□ 1.67
SSU72-204ENST00000378726 U2SURPO15042 1029 aaKnown RBP25.5■■□□□ 1.67
SSU72-204ENST00000378726 PPM1GO15355 546 aaPredicted RBP25.5■■□□□ 1.67
SSU72-204ENST00000378726 PNPLA6Q8IY17 1366 aa25.49■■□□□ 1.67
SSU72-204ENST00000378726 MON2Q7Z3U7 1717 aa25.49■■□□□ 1.67
SSU72-204ENST00000378726 DIAPH1O60610 1272 aaKnown RBP25.49■■□□□ 1.67
SSU72-204ENST00000378726 TCP11L2Q8N4U5 519 aa25.49■■□□□ 1.67
SSU72-204ENST00000378726 AKAP12Q02952 1782 aa25.49■■□□□ 1.67
SSU72-204ENST00000378726 ITSN1Q15811 1721 aa25.47■■□□□ 1.67
SSU72-204ENST00000378726 SLFN5Q08AF3 891 aa25.47■■□□□ 1.67
SSU72-204ENST00000378726 DUSP27Q5VZP5 1158 aa25.47■■□□□ 1.67
SSU72-204ENST00000378726 NGDNQ8NEJ9 315 aaKnown RBP25.47■■□□□ 1.67
SSU72-204ENST00000378726 CHD2O14647 1828 aaKnown RBP25.47■■□□□ 1.67
SSU72-204ENST00000378726 TOPAZ1Q8N9V7 1692 aa25.47■■□□□ 1.67
SSU72-204ENST00000378726 NEUROD2Q15784 382 aa25.47■■□□□ 1.67
SSU72-204ENST00000378726 COL3A1P02461 1466 aaPredicted RBP25.47■■□□□ 1.67
SSU72-204ENST00000378726 NKTRP30414 1462 aaKnown RBP25.47■■□□□ 1.67
SSU72-204ENST00000378726 RBM33Q96EV2 1170 aaKnown RBP25.46■■□□□ 1.67
SSU72-204ENST00000378726 USP6P35125 1406 aa25.46■■□□□ 1.67
SSU72-204ENST00000378726 ERICH6Q7L0X2 663 aa25.45■■□□□ 1.67
SSU72-204ENST00000378726 WWC1Q8IX03 1113 aa25.45■■□□□ 1.66
SSU72-204ENST00000378726 RRP7AQ9Y3A4 280 aaKnown RBP25.45■■□□□ 1.66
SSU72-204ENST00000378726 EMILIN1Q9Y6C2 1016 aa25.44■■□□□ 1.66
SSU72-204ENST00000378726 AATKQ6ZMQ8 1374 aa25.44■■□□□ 1.66
SSU72-204ENST00000378726 TRMT2AQ8IZ69 625 aaKnown RBP25.43■■□□□ 1.66
SSU72-204ENST00000378726 SPINK5Q9NQ38 1064 aaPredicted RBP25.43■■□□□ 1.66
SSU72-204ENST00000378726 ANKARQ7Z5J8 1434 aa25.42■■□□□ 1.66
SSU72-204ENST00000378726 RRP1P56182 461 aaKnown RBP25.41■■□□□ 1.66
SSU72-204ENST00000378726 E9PSI1 815 aa25.4■■□□□ 1.66
SSU72-204ENST00000378726 RRS1Q15050 365 aaKnown RBP25.4■■□□□ 1.66
SSU72-204ENST00000378726 PLEKHF1Q96S99 279 aa25.4■■□□□ 1.66
SSU72-204ENST00000378726 DMRT2Q9Y5R5 561 aa25.4■■□□□ 1.66
SSU72-204ENST00000378726 SSH2Q76I76 1423 aa25.39■■□□□ 1.66
SSU72-204ENST00000378726 MAP2P11137 1827 aaKnown RBP25.39■■□□□ 1.66
SSU72-204ENST00000378726 RGPD8O14715 1765 aaPredicted RBP25.38■■□□□ 1.65
SSU72-204ENST00000378726 PHF23Q9BUL5 403 aaPredicted RBP25.38■■□□□ 1.65
SSU72-204ENST00000378726 TTC21AQ8NDW8 1320 aa25.38■■□□□ 1.65
SSU72-204ENST00000378726 NCBP3Q53F19 620 aaKnown RBP25.37■■□□□ 1.65
SSU72-204ENST00000378726 PNNQ9H307 717 aaKnown RBP25.37■■□□□ 1.65
SSU72-204ENST00000378726 IQSEC2Q5JU85 1478 aa25.37■■□□□ 1.65
SSU72-204ENST00000378726 CCDC27Q2M243 656 aa25.37■■□□□ 1.65
SSU72-204ENST00000378726 NRKQ7Z2Y5 1582 aa25.35■■□□□ 1.65
SSU72-204ENST00000378726 FCHSD2O94868 740 aa25.35■■□□□ 1.65
SSU72-204ENST00000378726 C14orf37Q86TY3 774 aa25.35■■□□□ 1.65
SSU72-204ENST00000378726 MAPK8IP3Q9UPT6 1336 aa25.34■■□□□ 1.65
SSU72-204ENST00000378726 IL13P35225 146 aa25.34■■□□□ 1.65
SSU72-204ENST00000378726 WDR63Q8IWG1 891 aa25.34■■□□□ 1.65
SSU72-204ENST00000378726 FMN2Q9NZ56 1722 aa25.34■■□□□ 1.65
SSU72-204ENST00000378726 OVOS2A0A0J9YW53 1432 aa25.33■■□□□ 1.65
SSU72-204ENST00000378726 OVOS2Q6IE36 1432 aa25.33■■□□□ 1.65
SSU72-204ENST00000378726 PHF8Q9UPP1 1060 aa25.32■■□□□ 1.64
SSU72-204ENST00000378726 ADGRL3Q9HAR2 1447 aa25.32■■□□□ 1.64
SSU72-204ENST00000378726 TMPOP42166 694 aaKnown RBP25.32■■□□□ 1.64
SSU72-204ENST00000378726 PROSER2Q86WR7 435 aaPredicted RBP25.32■■□□□ 1.64
SSU72-204ENST00000378726 CDK12Q9NYV4 1490 aaPredicted RBP25.31■■□□□ 1.64
SSU72-204ENST00000378726 NALCNQ8IZF0 1738 aa25.31■■□□□ 1.64
SSU72-204ENST00000378726 USP31Q70CQ4 1352 aa25.3■■□□□ 1.64
SSU72-204ENST00000378726 CCDC136Q96JN2 1154 aa25.29■■□□□ 1.64
SSU72-204ENST00000378726 RSPH6AQ9H0K4 717 aa25.29■■□□□ 1.64
SSU72-204ENST00000378726 SOX12O15370 315 aa25.29■■□□□ 1.64
SSU72-204ENST00000378726 PLIN1O60240 522 aa25.29■■□□□ 1.64
SSU72-204ENST00000378726 HMOX1P09601 288 aa25.28■■□□□ 1.64
SSU72-204ENST00000378726 ESCO1Q5FWF5 840 aa25.28■■□□□ 1.64
SSU72-204ENST00000378726 PRKAR2BP31323 418 aa25.28■■□□□ 1.64
SSU72-204ENST00000378726 HSPA2P54652 639 aa25.28■■□□□ 1.64
SSU72-204ENST00000378726 KDM4FA0A1W2PPD8 638 aa25.27■■□□□ 1.64
SSU72-204ENST00000378726 NLRP6P59044 892 aa25.27■■□□□ 1.64
SSU72-204ENST00000378726 PAK3O75914 559 aaPredicted RBP25.26■■□□□ 1.63
SSU72-204ENST00000378726 NEFMP07197 916 aa25.26■■□□□ 1.63
SSU72-204ENST00000378726 RIPK4P57078 832 aa25.26■■□□□ 1.63
SSU72-204ENST00000378726 TRIM35Q9UPQ4 493 aa25.25■■□□□ 1.63
SSU72-204ENST00000378726 ABTB2Q8N961 1025 aa25.24■■□□□ 1.63
SSU72-204ENST00000378726 NWD1Q149M9 1564 aa25.23■■□□□ 1.63
SSU72-204ENST00000378726 NUTM2GQ5VZR2 741 aa25.23■■□□□ 1.63
SSU72-204ENST00000378726 EXOC6Q8TAG9 804 aa25.23■■□□□ 1.63
SSU72-204ENST00000378726 PSME1Q06323 249 aa25.22■■□□□ 1.63
SSU72-204ENST00000378726 EIF4A2Q14240 407 aaKnown RBP25.22■■□□□ 1.63
SSU72-204ENST00000378726 HSP90AB2PQ58FF8 381 aa25.22■■□□□ 1.63
SSU72-204ENST00000378726 PHACTR3Q96KR7 559 aa25.22■■□□□ 1.63
SSU72-204ENST00000378726 MYH16Q9H6N6 1097 aa25.21■■□□□ 1.63
SSU72-204ENST00000378726 MAP3K19Q56UN5 1328 aa25.2■■□□□ 1.63
SSU72-204ENST00000378726 C19orf44Q9H6X5 657 aa25.2■■□□□ 1.62
SSU72-204ENST00000378726 ORAI2Q96SN7 254 aa25.2■■□□□ 1.62
SSU72-204ENST00000378726 LRRC7Q96NW7 1537 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms