RNA–Protein interactions for RNA: ENST00000378680.6

DMD-208, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 1,858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-208ENST00000378680 NRKQ7Z2Y5 1582 aa25.16■■□□□ 1.62
DMD-208ENST00000378680 COG3Q96JB2 828 aa25.15■■□□□ 1.62
DMD-208ENST00000378680 TTC21BQ7Z4L5 1316 aa25.15■■□□□ 1.62
DMD-208ENST00000378680 SHPRHQ149N8 1683 aa25.12■■□□□ 1.61
DMD-208ENST00000378680 TTC21AQ8NDW8 1320 aa25.11■■□□□ 1.61
DMD-208ENST00000378680 SENP3-EIF4A1A0A087X0R7 540 aa25.11■■□□□ 1.61
DMD-208ENST00000378680 STRCQ7RTU9 1775 aa25.09■■□□□ 1.61
DMD-208ENST00000378680 SSH2Q76I76 1423 aa25.09■■□□□ 1.61
DMD-208ENST00000378680 ZRANB1Q9UGI0 708 aa25.09■■□□□ 1.61
DMD-208ENST00000378680 NUDCQ9Y266 331 aa25.08■■□□□ 1.61
DMD-208ENST00000378680 SALL2Q9Y467 1007 aaPredicted RBP25.08■■□□□ 1.61
DMD-208ENST00000378680 AATKQ6ZMQ8 1374 aa25.08■■□□□ 1.6
DMD-208ENST00000378680 MAP2P11137 1827 aaKnown RBP25.07■■□□□ 1.6
DMD-208ENST00000378680 PHF8Q9UPP1 1060 aa25.07■■□□□ 1.6
DMD-208ENST00000378680 C19orf44Q9H6X5 657 aa25.06■■□□□ 1.6
DMD-208ENST00000378680 STRCP1A6NGW2 1772 aa25.06■■□□□ 1.6
DMD-208ENST00000378680 NCOA3Q9Y6Q9 1424 aa25.05■■□□□ 1.6
DMD-208ENST00000378680 PDE3BQ13370 1112 aa25.05■■□□□ 1.6
DMD-208ENST00000378680 POLKQ9UBT6 870 aa25.05■■□□□ 1.6
DMD-208ENST00000378680 SMG6Q86US8 1419 aaKnown RBP25.05■■□□□ 1.6
DMD-208ENST00000378680 CCDC146Q8IYE0 955 aa25.04■■□□□ 1.6
DMD-208ENST00000378680 COL3A1P02461 1466 aaPredicted RBP25.03■■□□□ 1.6
DMD-208ENST00000378680 PNPLA6Q8IY17 1366 aa25.03■■□□□ 1.6
DMD-208ENST00000378680 ESCO1Q5FWF5 840 aa25.03■■□□□ 1.6
DMD-208ENST00000378680 OVOS2A0A0J9YW53 1432 aa25.03■■□□□ 1.6
DMD-208ENST00000378680 OVOS2Q6IE36 1432 aa25.03■■□□□ 1.6
DMD-208ENST00000378680 TMEM94Q12767 1356 aa25.02■■□□□ 1.6
DMD-208ENST00000378680 PPM1GO15355 546 aaPredicted RBP25.02■■□□□ 1.6
DMD-208ENST00000378680 DIAPH1O60610 1272 aaKnown RBP25.01■■□□□ 1.59
DMD-208ENST00000378680 U2AF1L5P0DN76 240 aaPredicted RBP25■■□□□ 1.59
DMD-208ENST00000378680 FBLN1P23142 703 aa25■■□□□ 1.59
DMD-208ENST00000378680 U2AF1Q01081 240 aaKnown RBP eCLIP25■■□□□ 1.59
DMD-208ENST00000378680 NGEFQ8N5V2 710 aa25■■□□□ 1.59
DMD-208ENST00000378680 RUNDC1Q96C34 613 aa25■■□□□ 1.59
DMD-208ENST00000378680 USP31Q70CQ4 1352 aa24.99■■□□□ 1.59
DMD-208ENST00000378680 APAF1O14727 1248 aa24.98■■□□□ 1.59
DMD-208ENST00000378680 EMILIN1Q9Y6C2 1016 aa24.98■■□□□ 1.59
DMD-208ENST00000378680 CDK12Q9NYV4 1490 aaPredicted RBP24.98■■□□□ 1.59
DMD-208ENST00000378680 U2SURPO15042 1029 aaKnown RBP24.98■■□□□ 1.59
DMD-208ENST00000378680 ATF3P18847 181 aa24.98■■□□□ 1.59
DMD-208ENST00000378680 DCCP43146 1447 aa24.98■■□□□ 1.59
DMD-208ENST00000378680 NEFLP07196 543 aa24.97■■□□□ 1.59
DMD-208ENST00000378680 PIK3C2AO00443 1686 aa24.96■■□□□ 1.59
DMD-208ENST00000378680 PSME1Q06323 249 aa24.96■■□□□ 1.59
DMD-208ENST00000378680 PAK3O75914 559 aaPredicted RBP24.95■■□□□ 1.58
DMD-208ENST00000378680 RRS1Q15050 365 aaKnown RBP24.95■■□□□ 1.58
DMD-208ENST00000378680 SUPT16HQ9Y5B9 1047 aaKnown RBP24.95■■□□□ 1.58
DMD-208ENST00000378680 C1orf167Q5SNV9 1468 aa24.94■■□□□ 1.58
DMD-208ENST00000378680 NLRP6P59044 892 aa24.94■■□□□ 1.58
DMD-208ENST00000378680 ORAI2Q96SN7 254 aa24.94■■□□□ 1.58
DMD-208ENST00000378680 ABTB2Q8N961 1025 aa24.93■■□□□ 1.58
DMD-208ENST00000378680 PNNQ9H307 717 aaKnown RBP24.93■■□□□ 1.58
DMD-208ENST00000378680 KIF1AQ12756 1690 aa24.93■■□□□ 1.58
DMD-208ENST00000378680 MSH6P52701 1360 aa24.92■■□□□ 1.58
DMD-208ENST00000378680 CADPS2Q86UW7 1296 aa24.92■■□□□ 1.58
DMD-208ENST00000378680 DMRT2Q9Y5R5 561 aa24.92■■□□□ 1.58
DMD-208ENST00000378680 USP54Q70EL1 1684 aa24.91■■□□□ 1.58
DMD-208ENST00000378680 ZNF521Q96K83 1311 aa24.9■■□□□ 1.58
DMD-208ENST00000378680 MST1RQ04912 1400 aa24.89■■□□□ 1.58
DMD-208ENST00000378680 TCP11L2Q8N4U5 519 aa24.89■■□□□ 1.57
DMD-208ENST00000378680 LRRC7Q96NW7 1537 aa24.88■■□□□ 1.57
DMD-208ENST00000378680 IQSEC2Q5JU85 1478 aa24.88■■□□□ 1.57
DMD-208ENST00000378680 GOLGA2Q08379 1002 aa24.88■■□□□ 1.57
DMD-208ENST00000378680 CDCA7LQ96GN5 454 aa24.88■■□□□ 1.57
DMD-208ENST00000378680 SOX12O15370 315 aa24.87■■□□□ 1.57
DMD-208ENST00000378680 FOXO3O43524 673 aa24.87■■□□□ 1.57
DMD-208ENST00000378680 ZNF335Q9H4Z2 1342 aaPredicted RBP24.87■■□□□ 1.57
DMD-208ENST00000378680 XIRP1Q702N8 1843 aaKnown RBP24.87■■□□□ 1.57
DMD-208ENST00000378680 IL13P35225 146 aa24.87■■□□□ 1.57
DMD-208ENST00000378680 FCHSD2O94868 740 aa24.86■■□□□ 1.57
DMD-208ENST00000378680 NUTM2GQ5VZR2 741 aa24.86■■□□□ 1.57
DMD-208ENST00000378680 MAPK8IP3Q9UPT6 1336 aa24.86■■□□□ 1.57
DMD-208ENST00000378680 FKBP8Q14318 412 aa24.85■■□□□ 1.57
DMD-208ENST00000378680 NCBP3Q53F19 620 aaKnown RBP24.85■■□□□ 1.57
DMD-208ENST00000378680 MARF1Q9Y4F3 1742 aaKnown RBP24.85■■□□□ 1.57
DMD-208ENST00000378680 PLEKHF1Q96S99 279 aa24.85■■□□□ 1.57
DMD-208ENST00000378680 NEFMP07197 916 aa24.83■■□□□ 1.57
DMD-208ENST00000378680 NEUROD2Q15784 382 aa24.83■■□□□ 1.56
DMD-208ENST00000378680 KRT28Q7Z3Y7 464 aa24.83■■□□□ 1.56
DMD-208ENST00000378680 MAP3K19Q56UN5 1328 aa24.83■■□□□ 1.56
DMD-208ENST00000378680 SBNO1A3KN83 1393 aa24.82■■□□□ 1.56
DMD-208ENST00000378680 PEAK1Q9H792 1746 aa24.82■■□□□ 1.56
DMD-208ENST00000378680 CCDC27Q2M243 656 aa24.81■■□□□ 1.56
DMD-208ENST00000378680 WWC1Q8IX03 1113 aa24.81■■□□□ 1.56
DMD-208ENST00000378680 RRP7AQ9Y3A4 280 aaKnown RBP24.81■■□□□ 1.56
DMD-208ENST00000378680 AMPHP49418 695 aa24.81■■□□□ 1.56
DMD-208ENST00000378680 FLT4P35916 1363 aa24.81■■□□□ 1.56
DMD-208ENST00000378680 RSPH6AQ9H0K4 717 aa24.8■■□□□ 1.56
DMD-208ENST00000378680 KIF24Q5T7B8 1368 aa24.79■■□□□ 1.56
DMD-208ENST00000378680 XPCQ01831 940 aaPredicted RBP24.79■■□□□ 1.56
DMD-208ENST00000378680 SLFN5Q08AF3 891 aa24.79■■□□□ 1.56
DMD-208ENST00000378680 TRPM3Q9HCF6 1732 aaPredicted RBP24.79■■□□□ 1.56
DMD-208ENST00000378680 E9PSI1 815 aa24.79■■□□□ 1.56
DMD-208ENST00000378680 EIF4A2Q14240 407 aaKnown RBP24.79■■□□□ 1.56
DMD-208ENST00000378680 PRKAR2BP31323 418 aa24.78■■□□□ 1.56
DMD-208ENST00000378680 HSP90AB2PQ58FF8 381 aa24.78■■□□□ 1.56
DMD-208ENST00000378680 HMOX1P09601 288 aa24.77■■□□□ 1.56
DMD-208ENST00000378680 TMPOP42166 694 aaKnown RBP24.77■■□□□ 1.56
DMD-208ENST00000378680 DUSP27Q5VZP5 1158 aa24.77■■□□□ 1.56
DMD-208ENST00000378680 KCNH5Q8NCM2 988 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms