RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 U2SURPO15042 1029 aaKnown RBP23.26■■□□□ 1.31
TDP2-202ENST00000378198 MVPQ14764 893 aaKnown RBP23.26■■□□□ 1.31
TDP2-202ENST00000378198 USP19O94966 1318 aa23.26■■□□□ 1.31
TDP2-202ENST00000378198 HDGFL2Q7Z4V5 671 aaPredicted RBP23.25■■□□□ 1.31
TDP2-202ENST00000378198 IL16Q14005 1332 aa23.25■■□□□ 1.31
TDP2-202ENST00000378198 PNNQ9H307 717 aaKnown RBP23.24■■□□□ 1.31
TDP2-202ENST00000378198 DZIP1LQ8IYY4 767 aaKnown RBP23.23■■□□□ 1.31
TDP2-202ENST00000378198 TRIM35Q9UPQ4 493 aa23.23■■□□□ 1.31
TDP2-202ENST00000378198 PDZRN3Q9UPQ7 1066 aa23.23■■□□□ 1.31
TDP2-202ENST00000378198 ARHGEF40Q8TER5 1519 aa23.22■■□□□ 1.31
TDP2-202ENST00000378198 EXOSC9Q06265 439 aaKnown RBP23.21■■□□□ 1.31
TDP2-202ENST00000378198 FTSJ3Q8IY81 847 aaKnown RBP23.21■■□□□ 1.31
TDP2-202ENST00000378198 TSR2Q969E8 191 aaKnown RBP23.21■■□□□ 1.31
TDP2-202ENST00000378198 PNPLA6Q8IY17 1366 aa23.21■■□□□ 1.31
TDP2-202ENST00000378198 DIAPH1O60610 1272 aaKnown RBP23.21■■□□□ 1.31
TDP2-202ENST00000378198 CDK19Q9BWU1 502 aa23.2■■□□□ 1.3
TDP2-202ENST00000378198 CDC42BPGQ6DT37 1551 aa23.2■■□□□ 1.3
TDP2-202ENST00000378198 SENP3Q9H4L4 574 aaPredicted RBP23.2■■□□□ 1.3
TDP2-202ENST00000378198 SMC4Q9NTJ3 1288 aa23.2■■□□□ 1.3
TDP2-202ENST00000378198 DLC1Q96QB1 1528 aa23.19■■□□□ 1.3
TDP2-202ENST00000378198 SEC24BO95487 1268 aa23.19■■□□□ 1.3
TDP2-202ENST00000378198 REREQ9P2R6 1566 aa23.18■■□□□ 1.3
TDP2-202ENST00000378198 FBXO31Q5XUX0 539 aaPredicted RBP23.18■■□□□ 1.3
TDP2-202ENST00000378198 RIPK4P57078 832 aa23.17■■□□□ 1.3
TDP2-202ENST00000378198 BECN1Q14457 450 aa23.17■■□□□ 1.3
TDP2-202ENST00000378198 STAG3Q9UJ98 1225 aa23.17■■□□□ 1.3
TDP2-202ENST00000378198 PPP6R1Q9UPN7 881 aa23.17■■□□□ 1.3
TDP2-202ENST00000378198 GSE1Q14687 1217 aa23.16■■□□□ 1.3
TDP2-202ENST00000378198 UPF2Q9HAU5 1272 aaKnown RBP23.16■■□□□ 1.3
TDP2-202ENST00000378198 DDX19BQ9UMR2 479 aa23.16■■□□□ 1.3
TDP2-202ENST00000378198 SETD1AO15047 1707 aaKnown RBP23.15■■□□□ 1.3
TDP2-202ENST00000378198 CABP1Q9NZU7 370 aa23.15■■□□□ 1.3
TDP2-202ENST00000378198 AGLP35573 1532 aa23.15■■□□□ 1.3
TDP2-202ENST00000378198 ATP7BP35670 1465 aa23.15■■□□□ 1.3
TDP2-202ENST00000378198 MAP2P11137 1827 aaKnown RBP23.15■■□□□ 1.3
TDP2-202ENST00000378198 SSH1Q8WYL5 1049 aa23.15■■□□□ 1.3
TDP2-202ENST00000378198 FCHSD2O94868 740 aa23.14■■□□□ 1.29
TDP2-202ENST00000378198 TRIM27P14373 513 aa23.14■■□□□ 1.29
TDP2-202ENST00000378198 ATF7IPQ6VMQ6 1270 aa23.14■■□□□ 1.29
TDP2-202ENST00000378198 HDAC1Q13547 482 aaPredicted RBP23.13■■□□□ 1.29
TDP2-202ENST00000378198 LRRC7Q96NW7 1537 aa23.12■■□□□ 1.29
TDP2-202ENST00000378198 SPATA31D1Q6ZQQ2 1576 aa23.12■■□□□ 1.29
TDP2-202ENST00000378198 RIMBP3CA6NJZ7 1639 aa23.11■■□□□ 1.29
TDP2-202ENST00000378198 RIMBP3BA6NNM3 1639 aa23.11■■□□□ 1.29
TDP2-202ENST00000378198 RIMBP3Q9UFD9 1639 aa23.11■■□□□ 1.29
TDP2-202ENST00000378198 A2ML1A8K2U0 1454 aa23.11■■□□□ 1.29
TDP2-202ENST00000378198 KIF16BQ96L93 1317 aa23.1■■□□□ 1.29
TDP2-202ENST00000378198 IPO8O15397 1037 aaKnown RBP23.1■■□□□ 1.29
TDP2-202ENST00000378198 TBC1D32Q96NH3 1257 aa23.1■■□□□ 1.29
TDP2-202ENST00000378198 NOB1Q9ULX3 412 aaKnown RBP23.1■■□□□ 1.29
TDP2-202ENST00000378198 ALDH1L2Q3SY69 923 aa23.09■■□□□ 1.29
TDP2-202ENST00000378198 ITPRIPQ8IWB1 547 aa23.09■■□□□ 1.29
TDP2-202ENST00000378198 FAM135BQ49AJ0 1406 aa23.09■■□□□ 1.29
TDP2-202ENST00000378198 DIP2BQ9P265 1576 aa23.08■■□□□ 1.29
TDP2-202ENST00000378198 FRAT2O75474 233 aaPredicted RBP23.08■■□□□ 1.29
TDP2-202ENST00000378198 RIMS2Q9UQ26 1411 aa23.07■■□□□ 1.28
TDP2-202ENST00000378198 TSPOAP1O95153 1857 aa23.07■■□□□ 1.28
TDP2-202ENST00000378198 ZNF428Q96B54 188 aa23.07■■□□□ 1.28
TDP2-202ENST00000378198 POLKQ9UBT6 870 aa23.07■■□□□ 1.28
TDP2-202ENST00000378198 RSPH6AQ9H0K4 717 aa23.06■■□□□ 1.28
TDP2-202ENST00000378198 PPIP5K1Q6PFW1 1433 aa23.05■■□□□ 1.28
TDP2-202ENST00000378198 PRKAR2BP31323 418 aa23.04■■□□□ 1.28
TDP2-202ENST00000378198 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.04■■□□□ 1.282e-6■■■□□ 16.6
TDP2-202ENST00000378198 SMC5Q8IY18 1101 aa23.04■■□□□ 1.28
TDP2-202ENST00000378198 TMEM57Q8N5G2 664 aa23.04■■□□□ 1.28
TDP2-202ENST00000378198 BRPF1P55201 1214 aaPredicted RBP23.04■■□□□ 1.28
TDP2-202ENST00000378198 FAM69CQ0P6D2 419 aa23.04■■□□□ 1.28
TDP2-202ENST00000378198 WAPLQ7Z5K2 1190 aa23.04■■□□□ 1.28
TDP2-202ENST00000378198 ZBTB40Q9NUA8 1239 aa23.04■■□□□ 1.28
TDP2-202ENST00000378198 EDC4Q6P2E9 1401 aaKnown RBP23.02■■□□□ 1.28
TDP2-202ENST00000378198 CPSF1Q10570 1443 aaKnown RBP23.02■■□□□ 1.28
TDP2-202ENST00000378198 CYB5RLQ6IPT4 315 aa23.02■■□□□ 1.28
TDP2-202ENST00000378198 NRXN3Q9Y4C0 1643 aa23.02■■□□□ 1.28
TDP2-202ENST00000378198 CALD1Q05682 793 aaKnown RBP23.01■■□□□ 1.27
TDP2-202ENST00000378198 NFE2L2Q16236 605 aa23.01■■□□□ 1.27
TDP2-202ENST00000378198 KNDC1Q76NI1 1749 aa23■■□□□ 1.27
TDP2-202ENST00000378198 MON2Q7Z3U7 1717 aa22.99■■□□□ 1.27
TDP2-202ENST00000378198 CDK12Q9NYV4 1490 aaPredicted RBP22.99■■□□□ 1.27
TDP2-202ENST00000378198 DLG5Q8TDM6 1919 aa22.99■■□□□ 1.27
TDP2-202ENST00000378198 WASLO00401 505 aaPredicted RBP22.98■■□□□ 1.27
TDP2-202ENST00000378198 AATKQ6ZMQ8 1374 aa22.97■■□□□ 1.27
TDP2-202ENST00000378198 AKAP12Q02952 1782 aa22.97■■□□□ 1.27
TDP2-202ENST00000378198 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.97■■□□□ 1.27
TDP2-202ENST00000378198 TBC1D2Q9BYX2 928 aa22.97■■□□□ 1.27
TDP2-202ENST00000378198 CHMP4BQ9H444 224 aaKnown RBP22.97■■□□□ 1.27
TDP2-202ENST00000378198 ANTXR1Q9H6X2 564 aa22.97■■□□□ 1.27
TDP2-202ENST00000378198 ITSN1Q15811 1721 aa22.96■■□□□ 1.27
TDP2-202ENST00000378198 FBLN1P23142 703 aa22.96■■□□□ 1.27
TDP2-202ENST00000378198 IL13P35225 146 aa22.96■■□□□ 1.27
TDP2-202ENST00000378198 GNAI1P63096 354 aa22.96■■□□□ 1.27
TDP2-202ENST00000378198 ARHGAP45Q92619 1136 aa22.96■■□□□ 1.27
TDP2-202ENST00000378198 SLKQ9H2G2 1235 aaPredicted RBP22.96■■□□□ 1.27
TDP2-202ENST00000378198 PHACTR3Q96KR7 559 aa22.95■■□□□ 1.26
TDP2-202ENST00000378198 C22orf23Q9BZE7 217 aa22.95■■□□□ 1.26
TDP2-202ENST00000378198 HMOX1P09601 288 aa22.94■■□□□ 1.26
TDP2-202ENST00000378198 IFT57Q9NWB7 429 aa22.94■■□□□ 1.26
TDP2-202ENST00000378198 VAMP4O75379 141 aa22.94■■□□□ 1.26
TDP2-202ENST00000378198 NUCB1Q02818 461 aa22.94■■□□□ 1.26
TDP2-202ENST00000378198 IL27Q8NEV9 243 aa22.94■■□□□ 1.26
TDP2-202ENST00000378198 SIRT1Q96EB6 747 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms