RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 CA8P35219 290 aa19.54■□□□□ 0.72
RGP1-201ENST00000378078 SLC3A2P08195 630 aaKnown RBP19.53■□□□□ 0.72
RGP1-201ENST00000378078 SART3Q15020 963 aaKnown RBP19.53■□□□□ 0.72
RGP1-201ENST00000378078 TOM1L2Q6ZVM7 507 aa19.53■□□□□ 0.72
RGP1-201ENST00000378078 TRMT1LQ7Z2T5 733 aaKnown RBP19.53■□□□□ 0.72
RGP1-201ENST00000378078 TTLL12Q14166 644 aaPredicted RBP19.53■□□□□ 0.72
RGP1-201ENST00000378078 NINLQ9Y2I6 1382 aa19.52■□□□□ 0.72
RGP1-201ENST00000378078 AXDND1Q5T1B0 1012 aaPredicted RBP19.52■□□□□ 0.72
RGP1-201ENST00000378078 FKBP4Q02790 459 aaKnown RBP eCLIP19.52■□□□□ 0.71
RGP1-201ENST00000378078 SURF6O75683 361 aaKnown RBP19.51■□□□□ 0.71
RGP1-201ENST00000378078 HSP90B2PQ58FF3 399 aa19.51■□□□□ 0.71
RGP1-201ENST00000378078 CABP4P57796 275 aa19.51■□□□□ 0.71
RGP1-201ENST00000378078 RDXP35241 583 aaKnown RBP19.51■□□□□ 0.71
RGP1-201ENST00000378078 HSP90AB3PQ58FF7 597 aa19.51■□□□□ 0.71
RGP1-201ENST00000378078 ZNF76P36508 570 aa19.5■□□□□ 0.71
RGP1-201ENST00000378078 WDR78Q5VTH9 848 aa19.5■□□□□ 0.71
RGP1-201ENST00000378078 SCLT1Q96NL6 688 aa19.5■□□□□ 0.71
RGP1-201ENST00000378078 TRIM5Q9C035 493 aa19.49■□□□□ 0.71
RGP1-201ENST00000378078 TSPYL1Q9H0U9 437 aa19.49■□□□□ 0.71
RGP1-201ENST00000378078 DEF6Q9H4E7 631 aa19.49■□□□□ 0.71
RGP1-201ENST00000378078 SLC4A8Q2Y0W8 1093 aa19.49■□□□□ 0.71
RGP1-201ENST00000378078 CCDC69A6NI79 296 aa19.48■□□□□ 0.71
RGP1-201ENST00000378078 LIG1P18858 919 aa19.48■□□□□ 0.71
RGP1-201ENST00000378078 NAT10Q9H0A0 1025 aaKnown RBP19.48■□□□□ 0.71
RGP1-201ENST00000378078 API5Q9BZZ5 524 aaKnown RBP19.47■□□□□ 0.71
RGP1-201ENST00000378078 CCDC191Q8NCU4 936 aa19.47■□□□□ 0.71
RGP1-201ENST00000378078 FMN1Q68DA7 1419 aa19.47■□□□□ 0.71
RGP1-201ENST00000378078 ROCK1Q13464 1354 aa19.47■□□□□ 0.71
RGP1-201ENST00000378078 TXLNAP40222 546 aa19.47■□□□□ 0.71
RGP1-201ENST00000378078 PROSER2Q86WR7 435 aaPredicted RBP19.47■□□□□ 0.71
RGP1-201ENST00000378078 HSP90AB4PQ58FF6 505 aa19.46■□□□□ 0.71
RGP1-201ENST00000378078 CCDC158Q5M9N0 1113 aa19.46■□□□□ 0.71
RGP1-201ENST00000378078 CAVIN1Q6NZI2 390 aaKnown RBP19.46■□□□□ 0.71
RGP1-201ENST00000378078 JPH4Q96JJ6 628 aa19.46■□□□□ 0.71
RGP1-201ENST00000378078 ARGLU1Q9NWB6 273 aaPredicted RBP19.46■□□□□ 0.71
RGP1-201ENST00000378078 TMEM87AQ8NBN3 555 aa19.45■□□□□ 0.7
RGP1-201ENST00000378078 MYO6Q9UM54 1294 aa19.45■□□□□ 0.7
RGP1-201ENST00000378078 ACBD3Q9H3P7 528 aa19.45■□□□□ 0.7
RGP1-201ENST00000378078 C22orf23Q9BZE7 217 aa19.45■□□□□ 0.7
RGP1-201ENST00000378078 FIBPO43427 364 aa19.45■□□□□ 0.7
RGP1-201ENST00000378078 SERPINC1P01008 464 aa19.45■□□□□ 0.7
RGP1-201ENST00000378078 RBM10P98175 930 aaKnown RBP19.45■□□□□ 0.7
RGP1-201ENST00000378078 TAF3Q5VWG9 929 aa19.44■□□□□ 0.7
RGP1-201ENST00000378078 RUNDC1Q96C34 613 aa19.44■□□□□ 0.7
RGP1-201ENST00000378078 SMARCA2P51531 1590 aa19.44■□□□□ 0.7
RGP1-201ENST00000378078 FILIP1LQ4L180 1135 aa19.44■□□□□ 0.7
RGP1-201ENST00000378078 PSMA5P28066 241 aa19.44■□□□□ 0.7
RGP1-201ENST00000378078 UACAQ9BZF9 1416 aa19.43■□□□□ 0.7
RGP1-201ENST00000378078 SMARCE1Q969G3 411 aa19.43■□□□□ 0.7
RGP1-201ENST00000378078 WWC3Q9ULE0 1092 aa19.43■□□□□ 0.7
RGP1-201ENST00000378078 DCTN1Q14203 1278 aa19.43■□□□□ 0.7
RGP1-201ENST00000378078 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.43■□□□□ 0.7
RGP1-201ENST00000378078 NOM1Q5C9Z4 860 aaKnown RBP19.43■□□□□ 0.7
RGP1-201ENST00000378078 CCDC18Q5T9S5 1454 aa19.42■□□□□ 0.7
RGP1-201ENST00000378078 MPHOSPH8Q99549 860 aa19.42■□□□□ 0.7
RGP1-201ENST00000378078 PHLDB1Q86UU1 1377 aa19.42■□□□□ 0.7
RGP1-201ENST00000378078 PDE3BQ13370 1112 aa19.42■□□□□ 0.7
RGP1-201ENST00000378078 DHX8Q14562 1220 aaKnown RBP19.42■□□□□ 0.7
RGP1-201ENST00000378078 CCDC181Q5TID7 509 aa19.42■□□□□ 0.7
RGP1-201ENST00000378078 GNL3LQ9NVN8 582 aaKnown RBP19.42■□□□□ 0.7
RGP1-201ENST00000378078 PRPF40AO75400 957 aaKnown RBP19.42■□□□□ 0.7
RGP1-201ENST00000378078 USP47Q96K76 1375 aa19.42■□□□□ 0.7
RGP1-201ENST00000378078 NFKBIBQ15653 356 aa19.41■□□□□ 0.7
RGP1-201ENST00000378078 STK38Q15208 465 aa19.41■□□□□ 0.7
RGP1-201ENST00000378078 SOGA3Q5TF21 947 aa19.41■□□□□ 0.7
RGP1-201ENST00000378078 KINO60870 393 aaKnown RBP19.41■□□□□ 0.7
RGP1-201ENST00000378078 TXNDC2Q86VQ3 553 aa19.41■□□□□ 0.7
RGP1-201ENST00000378078 RAI14Q9P0K7 980 aa19.41■□□□□ 0.7
RGP1-201ENST00000378078 MAPK8IP2Q13387 824 aaPredicted RBP19.4■□□□□ 0.7
RGP1-201ENST00000378078 CT47B1P0C2W7 299 aaPredicted RBP19.39■□□□□ 0.7
RGP1-201ENST00000378078 GNAI1P63096 354 aa19.39■□□□□ 0.7
RGP1-201ENST00000378078 ZRSR2Q15696 482 aaKnown RBP19.39■□□□□ 0.7
RGP1-201ENST00000378078 WASHC2AQ641Q2 1341 aa19.39■□□□□ 0.7
RGP1-201ENST00000378078 CCDC30Q5VVM6 783 aa19.39■□□□□ 0.7
RGP1-201ENST00000378078 TMX1Q9H3N1 280 aa19.39■□□□□ 0.7
RGP1-201ENST00000378078 CLASRPQ8N2M8 674 aaKnown RBP19.39■□□□□ 0.69
RGP1-201ENST00000378078 PODXL2Q9NZ53 605 aa19.39■□□□□ 0.69
RGP1-201ENST00000378078 RSPH6AQ9H0K4 717 aa19.38■□□□□ 0.69
RGP1-201ENST00000378078 TDO2P48775 406 aa19.38■□□□□ 0.69
RGP1-201ENST00000378078 CHMP5Q9NZZ3 219 aa19.38■□□□□ 0.69
RGP1-201ENST00000378078 NEK4P51957 841 aa19.38■□□□□ 0.69
RGP1-201ENST00000378078 GPRASP1Q5JY77 1395 aa19.38■□□□□ 0.69
RGP1-201ENST00000378078 TATP17735 454 aaPredicted RBP19.38■□□□□ 0.69
RGP1-201ENST00000378078 TNNT1P13805 278 aa19.37■□□□□ 0.69
RGP1-201ENST00000378078 NASPP49321 788 aaPredicted RBP19.37■□□□□ 0.69
RGP1-201ENST00000378078 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
RGP1-201ENST00000378078 ERLIN2O94905 339 aa19.36■□□□□ 0.69
RGP1-201ENST00000378078 ERC1Q8IUD2 1116 aa19.36■□□□□ 0.69
RGP1-201ENST00000378078 NOB1Q9ULX3 412 aaKnown RBP19.36■□□□□ 0.69
RGP1-201ENST00000378078 CDC45O75419 566 aa19.36■□□□□ 0.69
RGP1-201ENST00000378078 ME1P48163 572 aa19.36■□□□□ 0.69
RGP1-201ENST00000378078 DNA2P51530 1060 aa19.36■□□□□ 0.69
RGP1-201ENST00000378078 FAM43AQ8N2R8 423 aa19.36■□□□□ 0.69
RGP1-201ENST00000378078 GBP2P32456 591 aaPredicted RBP19.35■□□□□ 0.69
RGP1-201ENST00000378078 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.35■□□□□ 0.69
RGP1-201ENST00000378078 UBA5Q9GZZ9 404 aa19.35■□□□□ 0.69
RGP1-201ENST00000378078 PLEKHO1Q53GL0 409 aaPredicted RBP19.35■□□□□ 0.69
RGP1-201ENST00000378078 TSR2Q969E8 191 aaKnown RBP19.35■□□□□ 0.69
RGP1-201ENST00000378078 LRRFIP2Q9Y608 721 aaKnown RBP19.35■□□□□ 0.69
RGP1-201ENST00000378078 ZNHIT6Q9NWK9 470 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms