RNA–Protein interactions for RNA: ENST00000377889.6

SLC3A2-202, Transcript of solute carrier family 3 member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-202ENST00000377889 NME9Q86XW9 330 aa25.47■■□□□ 1.67
SLC3A2-202ENST00000377889 MTHFSP49914 203 aa25.47■■□□□ 1.67
SLC3A2-202ENST00000377889 C19orf44Q9H6X5 657 aa25.46■■□□□ 1.67
SLC3A2-202ENST00000377889 TMEM94Q12767 1356 aa25.45■■□□□ 1.67
SLC3A2-202ENST00000377889 TTC21BQ7Z4L5 1316 aa25.45■■□□□ 1.66
SLC3A2-202ENST00000377889 NRKQ7Z2Y5 1582 aa25.45■■□□□ 1.66
SLC3A2-202ENST00000377889 COG3Q96JB2 828 aa25.44■■□□□ 1.66
SLC3A2-202ENST00000377889 CFAP53Q96M91 514 aa25.44■■□□□ 1.66
SLC3A2-202ENST00000377889 PHF8Q9UPP1 1060 aa25.43■■□□□ 1.66
SLC3A2-202ENST00000377889 ZBED9Q6R2W3 1325 aa25.43■■□□□ 1.66
SLC3A2-202ENST00000377889 ESCO1Q5FWF5 840 aa25.42■■□□□ 1.66
SLC3A2-202ENST00000377889 ADAMTS8Q9UP79 889 aa25.42■■□□□ 1.66
SLC3A2-202ENST00000377889 NCOA3Q9Y6Q9 1424 aa25.42■■□□□ 1.66
SLC3A2-202ENST00000377889 INSRP06213 1382 aa25.41■■□□□ 1.66
SLC3A2-202ENST00000377889 ZRANB1Q9UGI0 708 aa25.4■■□□□ 1.66
SLC3A2-202ENST00000377889 DMRT2Q9Y5R5 561 aa25.4■■□□□ 1.66
SLC3A2-202ENST00000377889 TTC21AQ8NDW8 1320 aa25.4■■□□□ 1.66
SLC3A2-202ENST00000377889 SSH2Q76I76 1423 aa25.39■■□□□ 1.66
SLC3A2-202ENST00000377889 ATF3P18847 181 aa25.39■■□□□ 1.66
SLC3A2-202ENST00000377889 ZNF335Q9H4Z2 1342 aaPredicted RBP25.37■■□□□ 1.65
SLC3A2-202ENST00000377889 BLMP54132 1417 aaPredicted RBP25.37■■□□□ 1.65
SLC3A2-202ENST00000377889 DCCP43146 1447 aa25.36■■□□□ 1.65
SLC3A2-202ENST00000377889 SENP3-EIF4A1A0A087X0R7 540 aa25.35■■□□□ 1.65
SLC3A2-202ENST00000377889 FKBP8Q14318 412 aa25.35■■□□□ 1.65
SLC3A2-202ENST00000377889 MSH6P52701 1360 aa25.34■■□□□ 1.65
SLC3A2-202ENST00000377889 ORAI2Q96SN7 254 aa25.33■■□□□ 1.65
SLC3A2-202ENST00000377889 OVOS2A0A0J9YW53 1432 aa25.33■■□□□ 1.65
SLC3A2-202ENST00000377889 OVOS2Q6IE36 1432 aa25.33■■□□□ 1.65
SLC3A2-202ENST00000377889 PPM1GO15355 546 aaPredicted RBP25.33■■□□□ 1.64
SLC3A2-202ENST00000377889 FBLN1P23142 703 aa25.33■■□□□ 1.64
SLC3A2-202ENST00000377889 PSME1Q06323 249 aa25.33■■□□□ 1.64
SLC3A2-202ENST00000377889 CADPS2Q86UW7 1296 aa25.33■■□□□ 1.64
SLC3A2-202ENST00000377889 AATKQ6ZMQ8 1374 aa25.32■■□□□ 1.64
SLC3A2-202ENST00000377889 PAK3O75914 559 aaPredicted RBP25.32■■□□□ 1.64
SLC3A2-202ENST00000377889 POLKQ9UBT6 870 aa25.32■■□□□ 1.64
SLC3A2-202ENST00000377889 C1orf167Q5SNV9 1468 aa25.32■■□□□ 1.64
SLC3A2-202ENST00000377889 SHPRHQ149N8 1683 aa25.32■■□□□ 1.64
SLC3A2-202ENST00000377889 MAP2P11137 1827 aaKnown RBP25.32■■□□□ 1.64
SLC3A2-202ENST00000377889 LRRC7Q96NW7 1537 aa25.3■■□□□ 1.64
SLC3A2-202ENST00000377889 NUDCQ9Y266 331 aa25.29■■□□□ 1.64
SLC3A2-202ENST00000377889 MST1RQ04912 1400 aa25.28■■□□□ 1.64
SLC3A2-202ENST00000377889 FOXO3O43524 673 aa25.28■■□□□ 1.64
SLC3A2-202ENST00000377889 NEFLP07196 543 aa25.28■■□□□ 1.64
SLC3A2-202ENST00000377889 ABTB2Q8N961 1025 aa25.28■■□□□ 1.64
SLC3A2-202ENST00000377889 SALL2Q9Y467 1007 aaPredicted RBP25.28■■□□□ 1.64
SLC3A2-202ENST00000377889 XIRP1Q702N8 1843 aaKnown RBP25.28■■□□□ 1.64
SLC3A2-202ENST00000377889 PIK3C2AO00443 1686 aa25.28■■□□□ 1.64
SLC3A2-202ENST00000377889 EMILIN1Q9Y6C2 1016 aa25.27■■□□□ 1.64
SLC3A2-202ENST00000377889 PNPLA6Q8IY17 1366 aa25.27■■□□□ 1.64
SLC3A2-202ENST00000377889 NLRP6P59044 892 aa25.27■■□□□ 1.64
SLC3A2-202ENST00000377889 KIF1AQ12756 1690 aa25.26■■□□□ 1.63
SLC3A2-202ENST00000377889 USP31Q70CQ4 1352 aa25.26■■□□□ 1.63
SLC3A2-202ENST00000377889 RRS1Q15050 365 aaKnown RBP25.26■■□□□ 1.63
SLC3A2-202ENST00000377889 CCDC146Q8IYE0 955 aa25.26■■□□□ 1.63
SLC3A2-202ENST00000377889 COL3A1P02461 1466 aaPredicted RBP25.26■■□□□ 1.63
SLC3A2-202ENST00000377889 DIAPH1O60610 1272 aaKnown RBP25.25■■□□□ 1.63
SLC3A2-202ENST00000377889 U2AF1L5P0DN76 240 aaPredicted RBP25.24■■□□□ 1.63
SLC3A2-202ENST00000377889 U2AF1Q01081 240 aaKnown RBP eCLIP25.24■■□□□ 1.632e-23■□□□□ 11.2
SLC3A2-202ENST00000377889 SMG6Q86US8 1419 aaKnown RBP25.24■■□□□ 1.63
SLC3A2-202ENST00000377889 U2SURPO15042 1029 aaKnown RBP25.24■■□□□ 1.63
SLC3A2-202ENST00000377889 SOX12O15370 315 aa25.24■■□□□ 1.63
SLC3A2-202ENST00000377889 NUTM2GQ5VZR2 741 aa25.23■■□□□ 1.63
SLC3A2-202ENST00000377889 CDK12Q9NYV4 1490 aaPredicted RBP25.23■■□□□ 1.63
SLC3A2-202ENST00000377889 XPCQ01831 940 aaPredicted RBP25.21■■□□□ 1.63
SLC3A2-202ENST00000377889 APAF1O14727 1248 aa25.18■■□□□ 1.62
SLC3A2-202ENST00000377889 KRT28Q7Z3Y7 464 aa25.18■■□□□ 1.62
SLC3A2-202ENST00000377889 RUNDC1Q96C34 613 aa25.18■■□□□ 1.62
SLC3A2-202ENST00000377889 USP54Q70EL1 1684 aa25.17■■□□□ 1.62
SLC3A2-202ENST00000377889 RBM19Q9Y4C8 960 aaKnown RBP25.16■■□□□ 1.62
SLC3A2-202ENST00000377889 MARF1Q9Y4F3 1742 aaKnown RBP25.15■■□□□ 1.62
SLC3A2-202ENST00000377889 PDE3BQ13370 1112 aa25.14■■□□□ 1.62
SLC3A2-202ENST00000377889 LMOD2Q6P5Q4 547 aa25.14■■□□□ 1.62
SLC3A2-202ENST00000377889 NPHP3Q7Z494 1330 aa25.14■■□□□ 1.62
SLC3A2-202ENST00000377889 MAP3K19Q56UN5 1328 aa25.13■■□□□ 1.61
SLC3A2-202ENST00000377889 PNNQ9H307 717 aaKnown RBP25.13■■□□□ 1.61
SLC3A2-202ENST00000377889 SLAIN2Q9P270 581 aa25.13■■□□□ 1.61
SLC3A2-202ENST00000377889 IL13P35225 146 aa25.12■■□□□ 1.61
SLC3A2-202ENST00000377889 NGEFQ8N5V2 710 aa25.12■■□□□ 1.61
SLC3A2-202ENST00000377889 TRPM3Q9HCF6 1732 aaPredicted RBP25.12■■□□□ 1.61
SLC3A2-202ENST00000377889 AMPHP49418 695 aa25.11■■□□□ 1.61
SLC3A2-202ENST00000377889 SBNO1A3KN83 1393 aa25.1■■□□□ 1.61
SLC3A2-202ENST00000377889 FLT4P35916 1363 aa25.1■■□□□ 1.61
SLC3A2-202ENST00000377889 DDX17Q92841 729 aaKnown RBP25.1■■□□□ 1.61
SLC3A2-202ENST00000377889 PEAK1Q9H792 1746 aa25.09■■□□□ 1.61
SLC3A2-202ENST00000377889 BRINP3Q76B58 766 aa25.09■■□□□ 1.61
SLC3A2-202ENST00000377889 TCP11L2Q8N4U5 519 aa25.09■■□□□ 1.61
SLC3A2-202ENST00000377889 KCNH5Q8NCM2 988 aa25.09■■□□□ 1.61
SLC3A2-202ENST00000377889 HSP90AB2PQ58FF8 381 aa25.09■■□□□ 1.61
SLC3A2-202ENST00000377889 MAPK8IP3Q9UPT6 1336 aa25.08■■□□□ 1.61
SLC3A2-202ENST00000377889 FCHSD2O94868 740 aa25.08■■□□□ 1.61
SLC3A2-202ENST00000377889 NEUROD2Q15784 382 aa25.07■■□□□ 1.6
SLC3A2-202ENST00000377889 KIF24Q5T7B8 1368 aa25.06■■□□□ 1.6
SLC3A2-202ENST00000377889 IQSEC2Q5JU85 1478 aa25.06■■□□□ 1.6
SLC3A2-202ENST00000377889 NEFMP07197 916 aa25.06■■□□□ 1.6
SLC3A2-202ENST00000377889 EIF4A2Q14240 407 aaKnown RBP25.06■■□□□ 1.6
SLC3A2-202ENST00000377889 PLEKHF1Q96S99 279 aa25.06■■□□□ 1.6
SLC3A2-202ENST00000377889 HMOX1P09601 288 aa25.05■■□□□ 1.6
SLC3A2-202ENST00000377889 CDCA7LQ96GN5 454 aa25.05■■□□□ 1.6
SLC3A2-202ENST00000377889 RRP7AQ9Y3A4 280 aaKnown RBP25.05■■□□□ 1.6
SLC3A2-202ENST00000377889 ZNF521Q96K83 1311 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms