RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 TWISTNBQ3B726 338 aaPredicted RBP14.36□□□□□ -0.11
SEC23B-204ENST00000377475 CAVIN1Q6NZI2 390 aaKnown RBP14.36□□□□□ -0.11
SEC23B-204ENST00000377475 NME9Q86XW9 330 aa14.36□□□□□ -0.11
SEC23B-204ENST00000377475 CROCC2H7BZ55 1655 aa14.36□□□□□ -0.11
SEC23B-204ENST00000377475 POLR3AO14802 1390 aaPredicted RBP14.36□□□□□ -0.11
SEC23B-204ENST00000377475 LTV1Q96GA3 475 aaPredicted RBP14.36□□□□□ -0.11
SEC23B-204ENST00000377475 NGEFQ8N5V2 710 aa14.35□□□□□ -0.11
SEC23B-204ENST00000377475 OTUD7AQ8TE49 926 aaPredicted RBP14.35□□□□□ -0.11
SEC23B-204ENST00000377475 TBC1D9Q6ZT07 1266 aa14.35□□□□□ -0.11
SEC23B-204ENST00000377475 TXNDC2Q86VQ3 553 aa14.35□□□□□ -0.11
SEC23B-204ENST00000377475 DDX11L8A8MPP1 907 aa14.35□□□□□ -0.11
SEC23B-204ENST00000377475 MCM10Q7L590 875 aa14.35□□□□□ -0.11
SEC23B-204ENST00000377475 ESF1Q9H501 851 aaKnown RBP14.35□□□□□ -0.11
SEC23B-204ENST00000377475 KIF16BQ96L93 1317 aa14.34□□□□□ -0.11
SEC23B-204ENST00000377475 FANCAO15360 1455 aa14.34□□□□□ -0.11
SEC23B-204ENST00000377475 ADGRL1O94910 1474 aa14.34□□□□□ -0.11
SEC23B-204ENST00000377475 TRIM6-TRIM34B2RNG4 842 aa14.34□□□□□ -0.11
SEC23B-204ENST00000377475 NUTM2GQ5VZR2 741 aa14.34□□□□□ -0.11
SEC23B-204ENST00000377475 RILPL2Q969X0 211 aa14.34□□□□□ -0.11
SEC23B-204ENST00000377475 PTPRTO14522 1441 aa14.34□□□□□ -0.11
SEC23B-204ENST00000377475 STAC3Q96MF2 364 aa14.33□□□□□ -0.12
SEC23B-204ENST00000377475 C8orf58Q8NAV2 365 aa14.33□□□□□ -0.12
SEC23B-204ENST00000377475 GAS2L2Q8NHY3 880 aa14.33□□□□□ -0.12
SEC23B-204ENST00000377475 ZBTB40Q9NUA8 1239 aa14.33□□□□□ -0.12
SEC23B-204ENST00000377475 CDC42BPBQ9Y5S2 1711 aa14.33□□□□□ -0.12
SEC23B-204ENST00000377475 MRE11P49959 708 aa14.32□□□□□ -0.12
SEC23B-204ENST00000377475 GAS2L3Q86XJ1 694 aa14.32□□□□□ -0.12
SEC23B-204ENST00000377475 F6X3S4 739 aa14.32□□□□□ -0.12
SEC23B-204ENST00000377475 RBM10P98175 930 aaKnown RBP14.32□□□□□ -0.12
SEC23B-204ENST00000377475 MAST1Q9Y2H9 1570 aa14.32□□□□□ -0.12
SEC23B-204ENST00000377475 PRPF40AO75400 957 aaKnown RBP14.32□□□□□ -0.12
SEC23B-204ENST00000377475 CALD1Q05682 793 aaKnown RBP14.32□□□□□ -0.12
SEC23B-204ENST00000377475 HSP90AA2PQ14568 343 aaPredicted RBP14.32□□□□□ -0.12
SEC23B-204ENST00000377475 LARP6Q9BRS8 491 aaKnown RBP14.32□□□□□ -0.12
SEC23B-204ENST00000377475 PTMAP06454 111 aaKnown RBP14.31□□□□□ -0.12
SEC23B-204ENST00000377475 A0A1W2PP64 1363 aa14.31□□□□□ -0.12
SEC23B-204ENST00000377475 ARHGEF5Q12774 1597 aa14.31□□□□□ -0.12
SEC23B-204ENST00000377475 SULT6B1Q6IMI4 303 aa14.31□□□□□ -0.12
SEC23B-204ENST00000377475 MBIPQ9NS73 344 aa14.31□□□□□ -0.12
SEC23B-204ENST00000377475 ESPNB1AK53 854 aa14.3□□□□□ -0.12
SEC23B-204ENST00000377475 MSNP26038 577 aaKnown RBP14.3□□□□□ -0.12
SEC23B-204ENST00000377475 AEBP1Q8IUX7 1158 aa14.3□□□□□ -0.12
SEC23B-204ENST00000377475 RBM27Q9P2N5 1060 aaKnown RBP14.3□□□□□ -0.12
SEC23B-204ENST00000377475 EIF2AK4Q9P2K8 1649 aaKnown RBP14.3□□□□□ -0.12
SEC23B-204ENST00000377475 MAP4K4O95819 1239 aaPredicted RBP14.29□□□□□ -0.12
SEC23B-204ENST00000377475 NUCB1Q02818 461 aa14.29□□□□□ -0.12
SEC23B-204ENST00000377475 PKP1Q13835 747 aa14.29□□□□□ -0.12
SEC23B-204ENST00000377475 TAOK2Q9UL54 1235 aa14.29□□□□□ -0.12
SEC23B-204ENST00000377475 K7ELQ4 463 aaPredicted RBP14.29□□□□□ -0.12
SEC23B-204ENST00000377475 NASPP49321 788 aaPredicted RBP14.29□□□□□ -0.12
SEC23B-204ENST00000377475 DNTTIP2Q5QJE6 756 aaKnown RBP14.29□□□□□ -0.12
SEC23B-204ENST00000377475 CYB5RLQ6IPT4 315 aa14.29□□□□□ -0.12
SEC23B-204ENST00000377475 BCL11BQ9C0K0 894 aaPredicted RBP14.28□□□□□ -0.12
SEC23B-204ENST00000377475 EXOC6BQ9Y2D4 811 aa14.28□□□□□ -0.12
SEC23B-204ENST00000377475 SMC5Q8IY18 1101 aa14.28□□□□□ -0.12
SEC23B-204ENST00000377475 E9PCH4 1651 aa14.28□□□□□ -0.12
SEC23B-204ENST00000377475 HDAC1Q13547 482 aaPredicted RBP14.28□□□□□ -0.12
SEC23B-204ENST00000377475 COG3Q96JB2 828 aa14.28□□□□□ -0.12
SEC23B-204ENST00000377475 NINLQ9Y2I6 1382 aa14.27□□□□□ -0.12
SEC23B-204ENST00000377475 CDC45O75419 566 aa14.27□□□□□ -0.13
SEC23B-204ENST00000377475 CASC1Q6TDU7 716 aa14.27□□□□□ -0.13
SEC23B-204ENST00000377475 ZGPATQ8N5A5 531 aaKnown RBP14.27□□□□□ -0.13
SEC23B-204ENST00000377475 GDPD2Q9HCC8 539 aa14.27□□□□□ -0.13
SEC23B-204ENST00000377475 POLKQ9UBT6 870 aa14.27□□□□□ -0.13
SEC23B-204ENST00000377475 SLC4A2P04920 1241 aa14.27□□□□□ -0.13
SEC23B-204ENST00000377475 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.26□□□□□ -0.13
SEC23B-204ENST00000377475 GNAI1P63096 354 aa14.26□□□□□ -0.13
SEC23B-204ENST00000377475 VAMP4O75379 141 aa14.26□□□□□ -0.13
SEC23B-204ENST00000377475 NEK4P51957 841 aa14.26□□□□□ -0.13
SEC23B-204ENST00000377475 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.26□□□□□ -0.13
SEC23B-204ENST00000377475 ANO2Q9NQ90 1003 aa14.26□□□□□ -0.13
SEC23B-204ENST00000377475 FAM13BQ9NYF5 915 aa14.26□□□□□ -0.13
SEC23B-204ENST00000377475 UPF3BQ9BZI7 483 aaKnown RBP14.25□□□□□ -0.13
SEC23B-204ENST00000377475 PREX2Q70Z35 1606 aa14.25□□□□□ -0.13
SEC23B-204ENST00000377475 NFE2L2Q16236 605 aa14.25□□□□□ -0.13
SEC23B-204ENST00000377475 CHMP3Q9Y3E7 222 aa14.25□□□□□ -0.13
SEC23B-204ENST00000377475 NPC1L1Q9UHC9 1359 aa14.25□□□□□ -0.13
SEC23B-204ENST00000377475 ZBTB7BO15156 539 aaPredicted RBP14.25□□□□□ -0.13
SEC23B-204ENST00000377475 DDX54Q8TDD1 881 aaKnown RBP14.25□□□□□ -0.13
SEC23B-204ENST00000377475 PLEKHF1Q96S99 279 aa14.25□□□□□ -0.13
SEC23B-204ENST00000377475 R3HCC1Q9Y3T6 440 aaKnown RBP14.24□□□□□ -0.13
SEC23B-204ENST00000377475 SYNMO15061 1565 aa14.24□□□□□ -0.13
SEC23B-204ENST00000377475 CCDC27Q2M243 656 aa14.24□□□□□ -0.13
SEC23B-204ENST00000377475 GLIPR1L2Q4G1C9 344 aa14.24□□□□□ -0.13
SEC23B-204ENST00000377475 RTF1Q92541 710 aaKnown RBP14.24□□□□□ -0.13
SEC23B-204ENST00000377475 MEIS3Q99687 375 aa14.24□□□□□ -0.13
SEC23B-204ENST00000377475 FCHSD2O94868 740 aa14.24□□□□□ -0.13
SEC23B-204ENST00000377475 CLTCL1P53675 1640 aa14.23□□□□□ -0.13
SEC23B-204ENST00000377475 UBE2Q2Q8WVN8 375 aa14.23□□□□□ -0.13
SEC23B-204ENST00000377475 IL1RAPL2Q9NP60 686 aa14.23□□□□□ -0.13
SEC23B-204ENST00000377475 ANKRD36BQ8N2N9 1353 aa14.23□□□□□ -0.13
SEC23B-204ENST00000377475 ERBB4Q15303 1308 aa14.23□□□□□ -0.13
SEC23B-204ENST00000377475 MYO5CQ9NQX4 1742 aa14.23□□□□□ -0.13
SEC23B-204ENST00000377475 FOXO3O43524 673 aa14.23□□□□□ -0.13
SEC23B-204ENST00000377475 SIRT2Q8IXJ6 389 aa14.23□□□□□ -0.13
SEC23B-204ENST00000377475 EIF2S2P20042 333 aaKnown RBP14.22□□□□□ -0.13
SEC23B-204ENST00000377475 AAMPQ13685 434 aa14.22□□□□□ -0.13
SEC23B-204ENST00000377475 MRPL50Q8N5N7 158 aaKnown RBP14.22□□□□□ -0.13
SEC23B-204ENST00000377475 LMOD2Q6P5Q4 547 aa14.22□□□□□ -0.13
SEC23B-204ENST00000377475 BAG4O95429 457 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms