RNA–Protein interactions for RNA: ENST00000377447.7

CBWD1-204, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CBWD1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-204ENST00000377447 HSPA2P54652 639 aa12.86□□□□□ -0.35
CBWD1-204ENST00000377447 COG6Q9Y2V7 657 aa12.86□□□□□ -0.35
CBWD1-204ENST00000377447 NUTM2FA1L443 756 aa12.86□□□□□ -0.35
CBWD1-204ENST00000377447 CENPQQ7L2Z9 268 aaPredicted RBP12.86□□□□□ -0.35
CBWD1-204ENST00000377447 PHF23Q9BUL5 403 aaPredicted RBP12.86□□□□□ -0.35
CBWD1-204ENST00000377447 TSR2Q969E8 191 aaKnown RBP12.85□□□□□ -0.35
CBWD1-204ENST00000377447 TMEM2Q9UHN6 1383 aa12.85□□□□□ -0.35
CBWD1-204ENST00000377447 SETD1AO15047 1707 aaKnown RBP12.85□□□□□ -0.35
CBWD1-204ENST00000377447 UBR1Q8IWV7 1749 aa12.85□□□□□ -0.35
CBWD1-204ENST00000377447 RARSP54136 660 aaKnown RBP12.85□□□□□ -0.35
CBWD1-204ENST00000377447 MYH16Q9H6N6 1097 aa12.85□□□□□ -0.35
CBWD1-204ENST00000377447 CEP170BQ9Y4F5 1589 aaPredicted RBP12.84□□□□□ -0.35
CBWD1-204ENST00000377447 KDM2BQ8NHM5 1336 aa12.84□□□□□ -0.35
CBWD1-204ENST00000377447 CCDC27Q2M243 656 aa12.84□□□□□ -0.35
CBWD1-204ENST00000377447 CLUAP1Q96AJ1 413 aa12.84□□□□□ -0.35
CBWD1-204ENST00000377447 NUDT16Q96DE0 195 aaKnown RBP12.84□□□□□ -0.35
CBWD1-204ENST00000377447 PPIP5K1Q6PFW1 1433 aa12.84□□□□□ -0.35
CBWD1-204ENST00000377447 NRXN3Q9Y4C0 1643 aa12.84□□□□□ -0.35
CBWD1-204ENST00000377447 TMPOP42166 694 aaKnown RBP12.84□□□□□ -0.35
CBWD1-204ENST00000377447 AEBP2Q6ZN18 517 aaPredicted RBP12.84□□□□□ -0.35
CBWD1-204ENST00000377447 NME9Q86XW9 330 aa12.84□□□□□ -0.35
CBWD1-204ENST00000377447 RGS3P49796 1198 aa12.83□□□□□ -0.36
CBWD1-204ENST00000377447 PLEKHF1Q96S99 279 aa12.83□□□□□ -0.36
CBWD1-204ENST00000377447 BACH2Q9BYV9 841 aa12.83□□□□□ -0.36
CBWD1-204ENST00000377447 ZRANB1Q9UGI0 708 aa12.83□□□□□ -0.36
CBWD1-204ENST00000377447 DLC1Q96QB1 1528 aa12.83□□□□□ -0.36
CBWD1-204ENST00000377447 ANKRD26Q9UPS8 1709 aa12.83□□□□□ -0.36
CBWD1-204ENST00000377447 KIF20BQ96Q89 1820 aa12.83□□□□□ -0.36
CBWD1-204ENST00000377447 MS4A1P11836 297 aa12.83□□□□□ -0.36
CBWD1-204ENST00000377447 RIPK4P57078 832 aa12.83□□□□□ -0.36
CBWD1-204ENST00000377447 SLC26A8Q96RN1 970 aa12.83□□□□□ -0.36
CBWD1-204ENST00000377447 PDE3AQ14432 1141 aa12.82□□□□□ -0.36
CBWD1-204ENST00000377447 POLKQ9UBT6 870 aa12.82□□□□□ -0.36
CBWD1-204ENST00000377447 EID1Q9Y6B2 187 aa12.82□□□□□ -0.36
CBWD1-204ENST00000377447 CCDC61Q9Y6R9 512 aa12.82□□□□□ -0.36
CBWD1-204ENST00000377447 MAP2P11137 1827 aaKnown RBP12.82□□□□□ -0.36
CBWD1-204ENST00000377447 HMOX1P09601 288 aa12.82□□□□□ -0.36
CBWD1-204ENST00000377447 TNNQ9UQP3 1299 aa12.82□□□□□ -0.36
CBWD1-204ENST00000377447 NOP58Q9Y2X3 529 aaKnown RBP12.82□□□□□ -0.36
CBWD1-204ENST00000377447 EMILIN1Q9Y6C2 1016 aa12.82□□□□□ -0.36
CBWD1-204ENST00000377447 MED14O60244 1454 aa12.81□□□□□ -0.36
CBWD1-204ENST00000377447 IPO9Q96P70 1041 aaKnown RBP12.81□□□□□ -0.36
CBWD1-204ENST00000377447 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
CBWD1-204ENST00000377447 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
CBWD1-204ENST00000377447 COL3A1P02461 1466 aaPredicted RBP12.8□□□□□ -0.36
CBWD1-204ENST00000377447 ATP7BP35670 1465 aa12.8□□□□□ -0.36
CBWD1-204ENST00000377447 NEFMP07197 916 aa12.8□□□□□ -0.36
CBWD1-204ENST00000377447 ANKLE2Q86XL3 938 aa12.8□□□□□ -0.36
CBWD1-204ENST00000377447 PRKAR2BP31323 418 aa12.8□□□□□ -0.36
CBWD1-204ENST00000377447 EXOSC9Q06265 439 aaKnown RBP12.8□□□□□ -0.36
CBWD1-204ENST00000377447 RRS1Q15050 365 aaKnown RBP12.8□□□□□ -0.36
CBWD1-204ENST00000377447 IGHDP01880 384 aa12.79□□□□□ -0.36
CBWD1-204ENST00000377447 RLBP1P12271 317 aa12.79□□□□□ -0.36
CBWD1-204ENST00000377447 COG3Q96JB2 828 aa12.79□□□□□ -0.36
CBWD1-204ENST00000377447 PNNQ9H307 717 aaKnown RBP12.79□□□□□ -0.36
CBWD1-204ENST00000377447 ZBTB47Q9UFB7 747 aaPredicted RBP12.79□□□□□ -0.36
CBWD1-204ENST00000377447 LAS1LQ9Y4W2 734 aaKnown RBP12.79□□□□□ -0.36
CBWD1-204ENST00000377447 ROBO2Q9HCK4 1378 aa12.78□□□□□ -0.36
CBWD1-204ENST00000377447 ADGRB2O60241 1585 aa12.78□□□□□ -0.36
CBWD1-204ENST00000377447 PNPLA6Q8IY17 1366 aa12.78□□□□□ -0.36
CBWD1-204ENST00000377447 FCHSD2O94868 740 aa12.78□□□□□ -0.36
CBWD1-204ENST00000377447 SMC4Q9NTJ3 1288 aa12.78□□□□□ -0.36
CBWD1-204ENST00000377447 ZNF142P52746 1687 aaPredicted RBP12.77□□□□□ -0.36
CBWD1-204ENST00000377447 CPSF1Q10570 1443 aaKnown RBP12.77□□□□□ -0.36
CBWD1-204ENST00000377447 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.36
CBWD1-204ENST00000377447 ARHGAP23Q9P227 1491 aa12.77□□□□□ -0.36
CBWD1-204ENST00000377447 FTSJ3Q8IY81 847 aaKnown RBP12.77□□□□□ -0.37
CBWD1-204ENST00000377447 LMTK3Q96Q04 1460 aa12.77□□□□□ -0.37
CBWD1-204ENST00000377447 SLIT1O75093 1534 aa12.77□□□□□ -0.37
CBWD1-204ENST00000377447 PRR36Q9H6K5 1346 aa12.76□□□□□ -0.37
CBWD1-204ENST00000377447 SOX12O15370 315 aa12.76□□□□□ -0.37
CBWD1-204ENST00000377447 PHACTR3Q96KR7 559 aa12.76□□□□□ -0.37
CBWD1-204ENST00000377447 FAM135BQ49AJ0 1406 aa12.76□□□□□ -0.37
CBWD1-204ENST00000377447 RSPH6AQ9H0K4 717 aa12.76□□□□□ -0.37
CBWD1-204ENST00000377447 ADAMTS13Q76LX8 1427 aa12.75□□□□□ -0.37
CBWD1-204ENST00000377447 NCBP3Q53F19 620 aaKnown RBP12.75□□□□□ -0.37
CBWD1-204ENST00000377447 THUMPD2Q9BTF0 503 aaKnown RBP12.75□□□□□ -0.37
CBWD1-204ENST00000377447 LRRC7Q96NW7 1537 aa12.74□□□□□ -0.37
CBWD1-204ENST00000377447 ZKSCAN2Q63HK3 967 aa12.74□□□□□ -0.37
CBWD1-204ENST00000377447 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
CBWD1-204ENST00000377447 TECPR2O15040 1411 aa12.74□□□□□ -0.37
CBWD1-204ENST00000377447 PLEKHG1Q9ULL1 1385 aa12.74□□□□□ -0.37
CBWD1-204ENST00000377447 NBR1Q14596 966 aa12.73□□□□□ -0.37
CBWD1-204ENST00000377447 SSH1Q8WYL5 1049 aa12.73□□□□□ -0.37
CBWD1-204ENST00000377447 SIRT1Q96EB6 747 aa12.73□□□□□ -0.37
CBWD1-204ENST00000377447 CPS1P31327 1500 aa12.73□□□□□ -0.37
CBWD1-204ENST00000377447 ACEP12821 1306 aa12.73□□□□□ -0.37
CBWD1-204ENST00000377447 AMOTL2Q9Y2J4 779 aa12.73□□□□□ -0.37
CBWD1-204ENST00000377447 DZIP1LQ8IYY4 767 aaKnown RBP12.72□□□□□ -0.37
CBWD1-204ENST00000377447 PMFBP1Q8TBY8 1022 aa12.72□□□□□ -0.37
CBWD1-204ENST00000377447 PCDHB15Q9Y5E8 787 aa12.72□□□□□ -0.37
CBWD1-204ENST00000377447 KNDC1Q76NI1 1749 aa12.72□□□□□ -0.37
CBWD1-204ENST00000377447 CDC42BPGQ6DT37 1551 aa12.72□□□□□ -0.37
CBWD1-204ENST00000377447 IL13P35225 146 aa12.72□□□□□ -0.37
CBWD1-204ENST00000377447 FAM161AQ3B820 660 aa12.72□□□□□ -0.37
CBWD1-204ENST00000377447 ITSN1Q15811 1721 aa12.71□□□□□ -0.37
CBWD1-204ENST00000377447 ELL2O00472 640 aaPredicted RBP12.71□□□□□ -0.37
CBWD1-204ENST00000377447 CT47B1P0C2W7 299 aaPredicted RBP12.71□□□□□ -0.37
CBWD1-204ENST00000377447 TRIM27P14373 513 aa12.71□□□□□ -0.37
CBWD1-204ENST00000377447 MVPQ14764 893 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms