RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 L1TD1Q5T7N2 865 aaKnown RBP17.6■□□□□ 0.41
SF1-205ENST00000377394 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
SF1-205ENST00000377394 PDZRN3Q9UPQ7 1066 aa17.6■□□□□ 0.41
SF1-205ENST00000377394 SLC52A1Q9NWF4 448 aa17.59■□□□□ 0.41
SF1-205ENST00000377394 STK26Q9P289 416 aa17.59■□□□□ 0.41
SF1-205ENST00000377394 MVPQ14764 893 aaKnown RBP17.59■□□□□ 0.41
SF1-205ENST00000377394 PTPRMP28827 1452 aa17.59■□□□□ 0.41
SF1-205ENST00000377394 CT47B1P0C2W7 299 aaPredicted RBP17.58■□□□□ 0.41
SF1-205ENST00000377394 GGNBP2Q9H3C7 697 aa17.58■□□□□ 0.41
SF1-205ENST00000377394 SRPK2P78362 688 aaKnown RBP17.58■□□□□ 0.4
SF1-205ENST00000377394 ZKSCAN2Q63HK3 967 aa17.58■□□□□ 0.4
SF1-205ENST00000377394 TSR2Q969E8 191 aaKnown RBP17.58■□□□□ 0.4
SF1-205ENST00000377394 RWDD1Q9H446 243 aaPredicted RBP17.58■□□□□ 0.4
SF1-205ENST00000377394 TRIM35Q9UPQ4 493 aa17.58■□□□□ 0.4
SF1-205ENST00000377394 CD163L1Q9NR16 1453 aa17.57■□□□□ 0.4
SF1-205ENST00000377394 RRP9O43818 475 aaKnown RBP17.57■□□□□ 0.4
SF1-205ENST00000377394 TMPOP42166 694 aaKnown RBP17.57■□□□□ 0.4
SF1-205ENST00000377394 GZF1Q9H116 711 aaPredicted RBP17.57■□□□□ 0.4
SF1-205ENST00000377394 FYB1O15117 783 aa17.56■□□□□ 0.4
SF1-205ENST00000377394 TMEM131LA2VDJ0 1609 aa17.56■□□□□ 0.4
SF1-205ENST00000377394 MED14O60244 1454 aa17.56■□□□□ 0.4
SF1-205ENST00000377394 RICTORQ6R327 1708 aa17.56■□□□□ 0.4
SF1-205ENST00000377394 MYO5BQ9ULV0 1848 aa17.56■□□□□ 0.4
SF1-205ENST00000377394 DZIP1LQ8IYY4 767 aaKnown RBP17.56■□□□□ 0.4
SF1-205ENST00000377394 ATAD2Q6PL18 1390 aa17.56■□□□□ 0.4
SF1-205ENST00000377394 U2SURPO15042 1029 aaKnown RBP17.55■□□□□ 0.4
SF1-205ENST00000377394 EXOSC9Q06265 439 aaKnown RBP17.55■□□□□ 0.4
SF1-205ENST00000377394 YEATS2Q9ULM3 1422 aa17.55■□□□□ 0.4
SF1-205ENST00000377394 CLCN1P35523 988 aa17.55■□□□□ 0.4
SF1-205ENST00000377394 SENP3Q9H4L4 574 aaPredicted RBP17.55■□□□□ 0.4
SF1-205ENST00000377394 CLTCQ00610 1675 aaKnown RBP17.54■□□□□ 0.4
SF1-205ENST00000377394 PRAM1Q96QH2 718 aa17.54■□□□□ 0.4
SF1-205ENST00000377394 ANKRD26Q9UPS8 1709 aa17.54■□□□□ 0.4
SF1-205ENST00000377394 TERF2IPQ9NYB0 399 aa17.54■□□□□ 0.4
SF1-205ENST00000377394 MINK1Q8N4C8 1332 aaPredicted RBP17.53■□□□□ 0.4
SF1-205ENST00000377394 YTHDC2Q9H6S0 1430 aaKnown RBP17.53■□□□□ 0.4
SF1-205ENST00000377394 PREX1Q8TCU6 1659 aa17.53■□□□□ 0.4
SF1-205ENST00000377394 FTSJ3Q8IY81 847 aaKnown RBP17.53■□□□□ 0.4
SF1-205ENST00000377394 SSH1Q8WYL5 1049 aa17.53■□□□□ 0.4
SF1-205ENST00000377394 SMC4Q9NTJ3 1288 aa17.53■□□□□ 0.4
SF1-205ENST00000377394 IL16Q14005 1332 aa17.52■□□□□ 0.4
SF1-205ENST00000377394 TRIM27P14373 513 aa17.52■□□□□ 0.4
SF1-205ENST00000377394 TBC1D32Q96NH3 1257 aa17.52■□□□□ 0.4
SF1-205ENST00000377394 GOLGA6L3A6NEY3 463 aa17.52■□□□□ 0.39
SF1-205ENST00000377394 PNPLA6Q8IY17 1366 aa17.51■□□□□ 0.39
SF1-205ENST00000377394 BECN1Q14457 450 aa17.51■□□□□ 0.39
SF1-205ENST00000377394 ANTXR1Q9H6X2 564 aa17.51■□□□□ 0.39
SF1-205ENST00000377394 SPRYD3Q8NCJ5 442 aa17.5■□□□□ 0.39
SF1-205ENST00000377394 HDAC1Q13547 482 aaPredicted RBP17.49■□□□□ 0.39
SF1-205ENST00000377394 FSD2A1L4K1 749 aa17.49■□□□□ 0.39
SF1-205ENST00000377394 ATF7IPQ6VMQ6 1270 aa17.49■□□□□ 0.39
SF1-205ENST00000377394 ARHGEF40Q8TER5 1519 aa17.49■□□□□ 0.39
SF1-205ENST00000377394 DIAPH1O60610 1272 aaKnown RBP17.48■□□□□ 0.39
SF1-205ENST00000377394 RIPK4P57078 832 aa17.48■□□□□ 0.39
SF1-205ENST00000377394 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
SF1-205ENST00000377394 CDK19Q9BWU1 502 aa17.48■□□□□ 0.39
SF1-205ENST00000377394 ALKQ9UM73 1620 aa17.47■□□□□ 0.39
SF1-205ENST00000377394 NOB1Q9ULX3 412 aaKnown RBP17.47■□□□□ 0.39
SF1-205ENST00000377394 DDX19BQ9UMR2 479 aa17.47■□□□□ 0.39
SF1-205ENST00000377394 FBXO31Q5XUX0 539 aaPredicted RBP17.47■□□□□ 0.39
SF1-205ENST00000377394 HDGFL2Q7Z4V5 671 aaPredicted RBP17.46■□□□□ 0.39
SF1-205ENST00000377394 PLEKHG5O94827 1062 aa17.46■□□□□ 0.39
SF1-205ENST00000377394 CABP1Q9NZU7 370 aa17.46■□□□□ 0.39
SF1-205ENST00000377394 ITPRIPQ8IWB1 547 aa17.46■□□□□ 0.38
SF1-205ENST00000377394 ERBB4Q15303 1308 aa17.45■□□□□ 0.38
SF1-205ENST00000377394 CDC42BPGQ6DT37 1551 aa17.45■□□□□ 0.38
SF1-205ENST00000377394 TBC1D2Q9BYX2 928 aa17.45■□□□□ 0.38
SF1-205ENST00000377394 TMEM57Q8N5G2 664 aa17.44■□□□□ 0.38
SF1-205ENST00000377394 SMC5Q8IY18 1101 aa17.44■□□□□ 0.38
SF1-205ENST00000377394 ZBTB40Q9NUA8 1239 aa17.44■□□□□ 0.38
SF1-205ENST00000377394 KIF20BQ96Q89 1820 aa17.43■□□□□ 0.38
SF1-205ENST00000377394 FCHSD2O94868 740 aa17.43■□□□□ 0.38
SF1-205ENST00000377394 PODXL2Q9NZ53 605 aa17.42■□□□□ 0.38
SF1-205ENST00000377394 LRRC7Q96NW7 1537 aa17.42■□□□□ 0.38
SF1-205ENST00000377394 KIF16BQ96L93 1317 aa17.42■□□□□ 0.38
SF1-205ENST00000377394 MCM4P33991 863 aa17.41■□□□□ 0.38
SF1-205ENST00000377394 ALDH1L2Q3SY69 923 aa17.41■□□□□ 0.38
SF1-205ENST00000377394 FAM135BQ49AJ0 1406 aa17.41■□□□□ 0.38
SF1-205ENST00000377394 POLKQ9UBT6 870 aa17.41■□□□□ 0.38
SF1-205ENST00000377394 IPO8O15397 1037 aaKnown RBP17.4■□□□□ 0.38
SF1-205ENST00000377394 FBLN1P23142 703 aa17.4■□□□□ 0.38
SF1-205ENST00000377394 ESPNB1AK53 854 aa17.39■□□□□ 0.37
SF1-205ENST00000377394 DLC1Q96QB1 1528 aa17.39■□□□□ 0.37
SF1-205ENST00000377394 PRKAR2BP31323 418 aa17.39■□□□□ 0.37
SF1-205ENST00000377394 ATP7BP35670 1465 aa17.38■□□□□ 0.37
SF1-205ENST00000377394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.38■□□□□ 0.37
SF1-205ENST00000377394 C22orf23Q9BZE7 217 aa17.38■□□□□ 0.37
SF1-205ENST00000377394 PPIP5K1Q6PFW1 1433 aa17.38■□□□□ 0.37
SF1-205ENST00000377394 BRPF1P55201 1214 aaPredicted RBP17.38■□□□□ 0.37
SF1-205ENST00000377394 WAPLQ7Z5K2 1190 aa17.38■□□□□ 0.37
SF1-205ENST00000377394 TRAK2O60296 914 aa17.37■□□□□ 0.37
SF1-205ENST00000377394 PHACTR3Q96KR7 559 aa17.37■□□□□ 0.37
SF1-205ENST00000377394 MFAP1P55081 439 aaKnown RBP17.36■□□□□ 0.37
SF1-205ENST00000377394 STAG3Q9UJ98 1225 aa17.36■□□□□ 0.37
SF1-205ENST00000377394 NUCB1Q02818 461 aa17.36■□□□□ 0.37
SF1-205ENST00000377394 A2ML1A8K2U0 1454 aa17.35■□□□□ 0.37
SF1-205ENST00000377394 ZNF428Q96B54 188 aa17.35■□□□□ 0.37
SF1-205ENST00000377394 MRE11P49959 708 aa17.35■□□□□ 0.37
SF1-205ENST00000377394 NFE2L2Q16236 605 aa17.35■□□□□ 0.37
SF1-205ENST00000377394 GRPEL1Q9HAV7 217 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms