RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 PARD3Q8TEW0 1356 aa19.23■□□□□ 0.67
UBA1-202ENST00000377269 HDGFL2Q7Z4V5 671 aaPredicted RBP19.23■□□□□ 0.67
UBA1-202ENST00000377269 LAS1LQ9Y4W2 734 aaKnown RBP19.23■□□□□ 0.67
UBA1-202ENST00000377269 NKTRP30414 1462 aaKnown RBP19.22■□□□□ 0.67
UBA1-202ENST00000377269 RALBP1Q15311 655 aa19.22■□□□□ 0.67
UBA1-202ENST00000377269 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.22■□□□□ 0.67
UBA1-202ENST00000377269 ACEP12821 1306 aa19.21■□□□□ 0.67
UBA1-202ENST00000377269 USP32Q8NFA0 1604 aa19.21■□□□□ 0.67
UBA1-202ENST00000377269 C19orf44Q9H6X5 657 aa19.2■□□□□ 0.66
UBA1-202ENST00000377269 CPSF1Q10570 1443 aaKnown RBP19.2■□□□□ 0.66
UBA1-202ENST00000377269 PLEKHG3A1L390 1219 aa19.19■□□□□ 0.66
UBA1-202ENST00000377269 GGNBP2Q9H3C7 697 aa19.19■□□□□ 0.66
UBA1-202ENST00000377269 DMRT2Q9Y5R5 561 aa19.19■□□□□ 0.66
UBA1-202ENST00000377269 CGNL1Q0VF96 1302 aa19.19■□□□□ 0.66
UBA1-202ENST00000377269 TNNT2P45379 298 aaPredicted RBP19.19■□□□□ 0.66
UBA1-202ENST00000377269 BRPF3Q9ULD4 1205 aa19.19■□□□□ 0.66
UBA1-202ENST00000377269 PDE4AP27815 886 aa19.18■□□□□ 0.66
UBA1-202ENST00000377269 FYB1O15117 783 aa19.18■□□□□ 0.66
UBA1-202ENST00000377269 MYBBP1AQ9BQG0 1328 aaKnown RBP19.18■□□□□ 0.66
UBA1-202ENST00000377269 BACH2Q9BYV9 841 aa19.18■□□□□ 0.66
UBA1-202ENST00000377269 MS4A1P11836 297 aa19.17■□□□□ 0.66
UBA1-202ENST00000377269 GSE1Q14687 1217 aa19.17■□□□□ 0.66
UBA1-202ENST00000377269 NPM2Q86SE8 214 aaKnown RBP19.17■□□□□ 0.66
UBA1-202ENST00000377269 NPC1L1Q9UHC9 1359 aa19.17■□□□□ 0.66
UBA1-202ENST00000377269 ORAI2Q96SN7 254 aa19.17■□□□□ 0.66
UBA1-202ENST00000377269 CDC42BPGQ6DT37 1551 aa19.17■□□□□ 0.66
UBA1-202ENST00000377269 ESCO1Q5FWF5 840 aa19.16■□□□□ 0.66
UBA1-202ENST00000377269 NGDNQ8NEJ9 315 aaKnown RBP19.16■□□□□ 0.66
UBA1-202ENST00000377269 ZRANB1Q9UGI0 708 aa19.16■□□□□ 0.66
UBA1-202ENST00000377269 RGPD8O14715 1765 aaPredicted RBP19.15■□□□□ 0.66
UBA1-202ENST00000377269 NME9Q86XW9 330 aa19.15■□□□□ 0.66
UBA1-202ENST00000377269 ANKARQ7Z5J8 1434 aa19.15■□□□□ 0.66
UBA1-202ENST00000377269 FMN2Q9NZ56 1722 aa19.14■□□□□ 0.66
UBA1-202ENST00000377269 LRRC7Q96NW7 1537 aa19.14■□□□□ 0.66
UBA1-202ENST00000377269 PPP2R1AP30153 589 aa19.14■□□□□ 0.66
UBA1-202ENST00000377269 MORC1Q86VD1 984 aa19.14■□□□□ 0.66
UBA1-202ENST00000377269 ATF3P18847 181 aa19.13■□□□□ 0.65
UBA1-202ENST00000377269 AEBP2Q6ZN18 517 aaPredicted RBP19.13■□□□□ 0.65
UBA1-202ENST00000377269 ZNF692Q9BU19 519 aaPredicted RBP19.13■□□□□ 0.65
UBA1-202ENST00000377269 PHF8Q9UPP1 1060 aa19.13■□□□□ 0.65
UBA1-202ENST00000377269 TOPAZ1Q8N9V7 1692 aa19.13■□□□□ 0.65
UBA1-202ENST00000377269 NLRP13Q86W25 1043 aa19.13■□□□□ 0.65
UBA1-202ENST00000377269 FBLN1P23142 703 aa19.12■□□□□ 0.65
UBA1-202ENST00000377269 EDC4Q6P2E9 1401 aaKnown RBP19.11■□□□□ 0.65
UBA1-202ENST00000377269 POLR3AO14802 1390 aaPredicted RBP19.11■□□□□ 0.65
UBA1-202ENST00000377269 USP6P35125 1406 aa19.11■□□□□ 0.65
UBA1-202ENST00000377269 TTC21BQ7Z4L5 1316 aa19.1■□□□□ 0.65
UBA1-202ENST00000377269 FOXO3O43524 673 aa19.1■□□□□ 0.65
UBA1-202ENST00000377269 MSH6P52701 1360 aa19.09■□□□□ 0.65
UBA1-202ENST00000377269 XPCQ01831 940 aaPredicted RBP19.09■□□□□ 0.65
UBA1-202ENST00000377269 NCOA3Q9Y6Q9 1424 aa19.09■□□□□ 0.65
UBA1-202ENST00000377269 DDRGK1Q96HY6 314 aa19.09■□□□□ 0.65
UBA1-202ENST00000377269 C1orf167Q5SNV9 1468 aa19.09■□□□□ 0.65
UBA1-202ENST00000377269 EIF5BO60841 1220 aaKnown RBP19.08■□□□□ 0.64
UBA1-202ENST00000377269 CADPS2Q86UW7 1296 aa19.08■□□□□ 0.64
UBA1-202ENST00000377269 RSPH6AQ9H0K4 717 aa19.08■□□□□ 0.64
UBA1-202ENST00000377269 BRD4O60885 1362 aaPredicted RBP19.07■□□□□ 0.64
UBA1-202ENST00000377269 MST1RQ04912 1400 aa19.07■□□□□ 0.64
UBA1-202ENST00000377269 DDX17Q92841 729 aaKnown RBP19.07■□□□□ 0.64
UBA1-202ENST00000377269 NSD2O96028 1365 aa19.06■□□□□ 0.64
UBA1-202ENST00000377269 XIRP1Q702N8 1843 aaKnown RBP19.06■□□□□ 0.64
UBA1-202ENST00000377269 SSH2Q76I76 1423 aa19.06■□□□□ 0.64
UBA1-202ENST00000377269 RRP1P56182 461 aaKnown RBP19.06■□□□□ 0.64
UBA1-202ENST00000377269 NFKBIBQ15653 356 aa19.06■□□□□ 0.64
UBA1-202ENST00000377269 PNISRQ8TF01 805 aaKnown RBP19.06■□□□□ 0.64
UBA1-202ENST00000377269 NUTM2GQ5VZR2 741 aa19.05■□□□□ 0.64
UBA1-202ENST00000377269 AKAP12Q02952 1782 aa19.05■□□□□ 0.64
UBA1-202ENST00000377269 PSME1Q06323 249 aa19.05■□□□□ 0.64
UBA1-202ENST00000377269 ITSN1Q15811 1721 aa19.04■□□□□ 0.64
UBA1-202ENST00000377269 MON2Q7Z3U7 1717 aa19.04■□□□□ 0.64
UBA1-202ENST00000377269 DCCP43146 1447 aa19.04■□□□□ 0.64
UBA1-202ENST00000377269 EXOC6Q8TAG9 804 aa19.04■□□□□ 0.64
UBA1-202ENST00000377269 MTHFSP49914 203 aa19.03■□□□□ 0.64
UBA1-202ENST00000377269 FRAT1Q92837 279 aaPredicted RBP19.03■□□□□ 0.64
UBA1-202ENST00000377269 SENP3-EIF4A1A0A087X0R7 540 aa19.03■□□□□ 0.64
UBA1-202ENST00000377269 COG3Q96JB2 828 aa19.02■□□□□ 0.64
UBA1-202ENST00000377269 SOX12O15370 315 aa19.01■□□□□ 0.63
UBA1-202ENST00000377269 FAM43AQ8N2R8 423 aa19.01■□□□□ 0.63
UBA1-202ENST00000377269 SLAIN2Q9P270 581 aa19.01■□□□□ 0.63
UBA1-202ENST00000377269 NRKQ7Z2Y5 1582 aa19■□□□□ 0.63
UBA1-202ENST00000377269 ABTB2Q8N961 1025 aa18.99■□□□□ 0.63
UBA1-202ENST00000377269 PLEKHG5O94827 1062 aa18.99■□□□□ 0.63
UBA1-202ENST00000377269 TTC21AQ8NDW8 1320 aa18.99■□□□□ 0.63
UBA1-202ENST00000377269 LTBP4Q8N2S1 1624 aa18.99■□□□□ 0.63
UBA1-202ENST00000377269 NLRP6P59044 892 aa18.98■□□□□ 0.63
UBA1-202ENST00000377269 RRS1Q15050 365 aaKnown RBP18.98■□□□□ 0.63
UBA1-202ENST00000377269 BRINP3Q76B58 766 aa18.98■□□□□ 0.63
UBA1-202ENST00000377269 KRT28Q7Z3Y7 464 aa18.98■□□□□ 0.63
UBA1-202ENST00000377269 KIF20BQ96Q89 1820 aa18.97■□□□□ 0.63
UBA1-202ENST00000377269 POLKQ9UBT6 870 aa18.97■□□□□ 0.63
UBA1-202ENST00000377269 EMILIN1Q9Y6C2 1016 aa18.97■□□□□ 0.63
UBA1-202ENST00000377269 LMOD2Q6P5Q4 547 aa18.96■□□□□ 0.63
UBA1-202ENST00000377269 OVOS2A0A0J9YW53 1432 aa18.96■□□□□ 0.63
UBA1-202ENST00000377269 OVOS2Q6IE36 1432 aa18.96■□□□□ 0.63
UBA1-202ENST00000377269 RCAN3Q9UKA8 241 aa18.95■□□□□ 0.62
UBA1-202ENST00000377269 ADAMTS8Q9UP79 889 aa18.95■□□□□ 0.62
UBA1-202ENST00000377269 PIK3C2AO00443 1686 aa18.93■□□□□ 0.62
UBA1-202ENST00000377269 ANKRD26Q9UPS8 1709 aa18.92■□□□□ 0.62
UBA1-202ENST00000377269 USP31Q70CQ4 1352 aa18.92■□□□□ 0.62
UBA1-202ENST00000377269 NPHP3Q7Z494 1330 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms