RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 IDI1Q13907 227 aa16.83■□□□□ 0.28
ACTN1-202ENST00000376839 CT47B1P0C2W7 299 aaPredicted RBP16.81■□□□□ 0.28
ACTN1-202ENST00000376839 ITPRIPQ8IWB1 547 aa16.8■□□□□ 0.28
ACTN1-202ENST00000376839 MINK1Q8N4C8 1332 aaPredicted RBP16.79■□□□□ 0.28
ACTN1-202ENST00000376839 FYB1O15117 783 aa16.79■□□□□ 0.28
ACTN1-202ENST00000376839 NOB1Q9ULX3 412 aaKnown RBP16.79■□□□□ 0.28
ACTN1-202ENST00000376839 ATF7IPQ6VMQ6 1270 aa16.78■□□□□ 0.28
ACTN1-202ENST00000376839 SPRYD3Q8NCJ5 442 aa16.78■□□□□ 0.28
ACTN1-202ENST00000376839 CD163L1Q9NR16 1453 aa16.78■□□□□ 0.28
ACTN1-202ENST00000376839 HDAC1Q13547 482 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-202ENST00000376839 PTPRMP28827 1452 aa16.77■□□□□ 0.28
ACTN1-202ENST00000376839 RIPK4P57078 832 aa16.77■□□□□ 0.28
ACTN1-202ENST00000376839 MFAP1P55081 439 aaKnown RBP16.77■□□□□ 0.27
ACTN1-202ENST00000376839 TMEM57Q8N5G2 664 aa16.77■□□□□ 0.27
ACTN1-202ENST00000376839 PRAM1Q96QH2 718 aa16.77■□□□□ 0.27
ACTN1-202ENST00000376839 DDX19BQ9UMR2 479 aa16.77■□□□□ 0.27
ACTN1-202ENST00000376839 DIP2CQ9Y2E4 1556 aa16.77■□□□□ 0.27
ACTN1-202ENST00000376839 MYO5BQ9ULV0 1848 aa16.76■□□□□ 0.27
ACTN1-202ENST00000376839 ZFYVE9O95405 1425 aa16.75■□□□□ 0.27
ACTN1-202ENST00000376839 ARHGAP31Q2M1Z3 1444 aa16.75■□□□□ 0.27
ACTN1-202ENST00000376839 C22orf23Q9BZE7 217 aa16.75■□□□□ 0.27
ACTN1-202ENST00000376839 TERF2IPQ9NYB0 399 aa16.75■□□□□ 0.27
ACTN1-202ENST00000376839 ATAD2Q6PL18 1390 aa16.75■□□□□ 0.27
ACTN1-202ENST00000376839 IL16Q14005 1332 aa16.75■□□□□ 0.27
ACTN1-202ENST00000376839 SMC5Q8IY18 1101 aa16.74■□□□□ 0.27
ACTN1-202ENST00000376839 ANKRD26Q9UPS8 1709 aa16.74■□□□□ 0.27
ACTN1-202ENST00000376839 DIAPH1O60610 1272 aaKnown RBP16.74■□□□□ 0.27
ACTN1-202ENST00000376839 ZBTB40Q9NUA8 1239 aa16.74■□□□□ 0.27
ACTN1-202ENST00000376839 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.73■□□□□ 0.27
ACTN1-202ENST00000376839 SLC52A1Q9NWF4 448 aa16.73■□□□□ 0.27
ACTN1-202ENST00000376839 MED14O60244 1454 aa16.72■□□□□ 0.27
ACTN1-202ENST00000376839 YTHDC2Q9H6S0 1430 aaKnown RBP16.72■□□□□ 0.27
ACTN1-202ENST00000376839 FBLN1P23142 703 aa16.72■□□□□ 0.27
ACTN1-202ENST00000376839 PNPLA6Q8IY17 1366 aa16.72■□□□□ 0.27
ACTN1-202ENST00000376839 YEATS2Q9ULM3 1422 aa16.71■□□□□ 0.26
ACTN1-202ENST00000376839 NEO1Q92859 1461 aa16.71■□□□□ 0.26
ACTN1-202ENST00000376839 TMEM131LA2VDJ0 1609 aa16.7■□□□□ 0.26
ACTN1-202ENST00000376839 CLTCQ00610 1675 aaKnown RBP16.7■□□□□ 0.26
ACTN1-202ENST00000376839 KIF16BQ96L93 1317 aa16.7■□□□□ 0.26
ACTN1-202ENST00000376839 CABP1Q9NZU7 370 aa16.7■□□□□ 0.26
ACTN1-202ENST00000376839 CDK19Q9BWU1 502 aa16.69■□□□□ 0.26
ACTN1-202ENST00000376839 LRRC7Q96NW7 1537 aa16.69■□□□□ 0.26
ACTN1-202ENST00000376839 HDGFL2Q7Z4V5 671 aaPredicted RBP16.69■□□□□ 0.26
ACTN1-202ENST00000376839 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
ACTN1-202ENST00000376839 PREX1Q8TCU6 1659 aa16.68■□□□□ 0.26
ACTN1-202ENST00000376839 IPO8O15397 1037 aaKnown RBP16.68■□□□□ 0.26
ACTN1-202ENST00000376839 PRKAR2BP31323 418 aa16.68■□□□□ 0.26
ACTN1-202ENST00000376839 MCM4P33991 863 aa16.67■□□□□ 0.26
ACTN1-202ENST00000376839 NUCB1Q02818 461 aa16.67■□□□□ 0.26
ACTN1-202ENST00000376839 FBXO31Q5XUX0 539 aaPredicted RBP16.67■□□□□ 0.26
ACTN1-202ENST00000376839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.67■□□□□ 0.262e-7■■■■□ 20.7
ACTN1-202ENST00000376839 ARHGEF40Q8TER5 1519 aa16.67■□□□□ 0.26
ACTN1-202ENST00000376839 RSPH6AQ9H0K4 717 aa16.67■□□□□ 0.26
ACTN1-202ENST00000376839 FCHSD2O94868 740 aa16.66■□□□□ 0.26
ACTN1-202ENST00000376839 ALDH1L2Q3SY69 923 aa16.66■□□□□ 0.26
ACTN1-202ENST00000376839 THUMPD2Q9BTF0 503 aaKnown RBP16.66■□□□□ 0.26
ACTN1-202ENST00000376839 RICTORQ6R327 1708 aa16.66■□□□□ 0.26
ACTN1-202ENST00000376839 ARXQ96QS3 562 aa16.66■□□□□ 0.26
ACTN1-202ENST00000376839 KIF20BQ96Q89 1820 aa16.66■□□□□ 0.26
ACTN1-202ENST00000376839 PNNQ9H307 717 aaKnown RBP16.65■□□□□ 0.26
ACTN1-202ENST00000376839 FAM135BQ49AJ0 1406 aa16.65■□□□□ 0.26
ACTN1-202ENST00000376839 ALKQ9UM73 1620 aa16.65■□□□□ 0.26
ACTN1-202ENST00000376839 PHACTR3Q96KR7 559 aa16.65■□□□□ 0.26
ACTN1-202ENST00000376839 CHMP5Q9NZZ3 219 aa16.65■□□□□ 0.26
ACTN1-202ENST00000376839 POLKQ9UBT6 870 aa16.65■□□□□ 0.26
ACTN1-202ENST00000376839 CDC42BPGQ6DT37 1551 aa16.65■□□□□ 0.26
ACTN1-202ENST00000376839 FAM43AQ8N2R8 423 aa16.65■□□□□ 0.26
ACTN1-202ENST00000376839 HMOX1P09601 288 aa16.64■□□□□ 0.25
ACTN1-202ENST00000376839 CHD1LQ86WJ1 897 aa16.64■□□□□ 0.25
ACTN1-202ENST00000376839 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
ACTN1-202ENST00000376839 GZF1Q9H116 711 aaPredicted RBP16.64■□□□□ 0.25
ACTN1-202ENST00000376839 HSCBQ8IWL3 235 aa16.63■□□□□ 0.25
ACTN1-202ENST00000376839 ZNF692Q9BU19 519 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-202ENST00000376839 C1orf115Q9H7X2 142 aa16.63■□□□□ 0.25
ACTN1-202ENST00000376839 L1TD1Q5T7N2 865 aaKnown RBP16.63■□□□□ 0.25
ACTN1-202ENST00000376839 TSPYL6Q8N831 410 aa16.63■□□□□ 0.25
ACTN1-202ENST00000376839 WAPLQ7Z5K2 1190 aa16.62■□□□□ 0.25
ACTN1-202ENST00000376839 PPIP5K1Q6PFW1 1433 aa16.62■□□□□ 0.25
ACTN1-202ENST00000376839 RBM25P49756 843 aaKnown RBP16.61■□□□□ 0.25
ACTN1-202ENST00000376839 ZBTB7BO15156 539 aaPredicted RBP16.61■□□□□ 0.25
ACTN1-202ENST00000376839 VAMP4O75379 141 aa16.61■□□□□ 0.25
ACTN1-202ENST00000376839 NFE2L2Q16236 605 aa16.61■□□□□ 0.25
ACTN1-202ENST00000376839 MRPL50Q8N5N7 158 aaKnown RBP16.61■□□□□ 0.25
ACTN1-202ENST00000376839 EMILIN1Q9Y6C2 1016 aa16.6■□□□□ 0.25
ACTN1-202ENST00000376839 ELL2O00472 640 aaPredicted RBP16.6■□□□□ 0.25
ACTN1-202ENST00000376839 BRPF1P55201 1214 aaPredicted RBP16.6■□□□□ 0.25
ACTN1-202ENST00000376839 ANKRD45Q5TZF3 282 aa16.6■□□□□ 0.25
ACTN1-202ENST00000376839 NCOA3Q9Y6Q9 1424 aa16.59■□□□□ 0.25
ACTN1-202ENST00000376839 FSD2A1L4K1 749 aa16.59■□□□□ 0.25
ACTN1-202ENST00000376839 XRCC6P12956 609 aaKnown RBP eCLIP16.59■□□□□ 0.25
ACTN1-202ENST00000376839 TRAK2O60296 914 aa16.59■□□□□ 0.25
ACTN1-202ENST00000376839 STAG3Q9UJ98 1225 aa16.59■□□□□ 0.25
ACTN1-202ENST00000376839 GOLGA6L3A6NEY3 463 aa16.58■□□□□ 0.25
ACTN1-202ENST00000376839 DDIT3P35638 169 aa16.58■□□□□ 0.25
ACTN1-202ENST00000376839 ZNF428Q96B54 188 aa16.58■□□□□ 0.25
ACTN1-202ENST00000376839 PTCH1Q13635 1447 aa16.58■□□□□ 0.24
ACTN1-202ENST00000376839 BMP2KLQ5H9B9 411 aa16.58■□□□□ 0.24
ACTN1-202ENST00000376839 RRAGDQ9NQL2 400 aaPredicted RBP16.58■□□□□ 0.24
ACTN1-202ENST00000376839 MAP2P11137 1827 aaKnown RBP16.58■□□□□ 0.24
ACTN1-202ENST00000376839 SIRT2Q8IXJ6 389 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms