RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 SLC4A2P04920 1241 aa13.91□□□□□ -0.18
HDAC6-203ENST00000376619 CASC1Q6TDU7 716 aa13.91□□□□□ -0.18
HDAC6-203ENST00000376619 PHACTR3Q96KR7 559 aa13.91□□□□□ -0.18
HDAC6-203ENST00000376619 F6X3S4 739 aa13.9□□□□□ -0.18
HDAC6-203ENST00000376619 HSP90AB2PQ58FF8 381 aa13.9□□□□□ -0.18
HDAC6-203ENST00000376619 ATF7IPQ6VMQ6 1270 aa13.9□□□□□ -0.18
HDAC6-203ENST00000376619 TEFQ10587 303 aa13.9□□□□□ -0.18
HDAC6-203ENST00000376619 UGGT1Q9NYU2 1555 aa13.9□□□□□ -0.18
HDAC6-203ENST00000376619 ANP32BQ92688 251 aaKnown RBP13.9□□□□□ -0.19
HDAC6-203ENST00000376619 ABCC1P33527 1531 aa13.89□□□□□ -0.19
HDAC6-203ENST00000376619 TRIM27P14373 513 aa13.89□□□□□ -0.19
HDAC6-203ENST00000376619 KIF13AQ9H1H9 1805 aa13.89□□□□□ -0.19
HDAC6-203ENST00000376619 CFAP74Q9C0B2 1584 aa13.89□□□□□ -0.19
HDAC6-203ENST00000376619 GNAI1P63096 354 aa13.89□□□□□ -0.19
HDAC6-203ENST00000376619 ZC3H6P61129 1189 aaKnown RBP13.89□□□□□ -0.19
HDAC6-203ENST00000376619 ARAP3Q8WWN8 1544 aa13.88□□□□□ -0.19
HDAC6-203ENST00000376619 FOXO3O43524 673 aa13.88□□□□□ -0.19
HDAC6-203ENST00000376619 TNRQ92752 1358 aa13.88□□□□□ -0.19
HDAC6-203ENST00000376619 LRRIQ1Q96JM4 1722 aa13.88□□□□□ -0.19
HDAC6-203ENST00000376619 PREX2Q70Z35 1606 aa13.88□□□□□ -0.19
HDAC6-203ENST00000376619 PDE3AQ14432 1141 aa13.88□□□□□ -0.19
HDAC6-203ENST00000376619 MVPQ14764 893 aaKnown RBP13.88□□□□□ -0.19
HDAC6-203ENST00000376619 LMOD3Q0VAK6 560 aa13.87□□□□□ -0.19
HDAC6-203ENST00000376619 TSPYL6Q8N831 410 aa13.87□□□□□ -0.19
HDAC6-203ENST00000376619 SMARCA5O60264 1052 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-203ENST00000376619 SEC24BO95487 1268 aa13.87□□□□□ -0.19
HDAC6-203ENST00000376619 PIP4K2BP78356 416 aa13.87□□□□□ -0.19
HDAC6-203ENST00000376619 C22orf23Q9BZE7 217 aa13.87□□□□□ -0.19
HDAC6-203ENST00000376619 CDC42BPAQ5VT25 1732 aa13.87□□□□□ -0.19
HDAC6-203ENST00000376619 NLRP2Q9NX02 1062 aa13.87□□□□□ -0.19
HDAC6-203ENST00000376619 AMOTL2Q9Y2J4 779 aa13.87□□□□□ -0.19
HDAC6-203ENST00000376619 GPRASP1Q5JY77 1395 aa13.87□□□□□ -0.19
HDAC6-203ENST00000376619 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
HDAC6-203ENST00000376619 ANXA1P04083 346 aa13.86□□□□□ -0.19
HDAC6-203ENST00000376619 PLA2R1Q13018 1463 aa13.86□□□□□ -0.19
HDAC6-203ENST00000376619 PPP6R1Q9UPN7 881 aa13.86□□□□□ -0.19
HDAC6-203ENST00000376619 MAGI2Q86UL8 1455 aa13.86□□□□□ -0.19
HDAC6-203ENST00000376619 MAP4K4O95819 1239 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-203ENST00000376619 MLH3Q9UHC1 1453 aa13.85□□□□□ -0.19
HDAC6-203ENST00000376619 WASLO00401 505 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-203ENST00000376619 TSHZ3Q63HK5 1081 aa13.85□□□□□ -0.19
HDAC6-203ENST00000376619 FGD1P98174 961 aa13.85□□□□□ -0.19
HDAC6-203ENST00000376619 WDR63Q8IWG1 891 aa13.85□□□□□ -0.19
HDAC6-203ENST00000376619 IL27Q8NEV9 243 aa13.85□□□□□ -0.19
HDAC6-203ENST00000376619 GOLGA6L22H0YM25 854 aa13.85□□□□□ -0.19
HDAC6-203ENST00000376619 CHMP4BQ9H444 224 aaKnown RBP13.85□□□□□ -0.19
HDAC6-203ENST00000376619 CDC42BPBQ9Y5S2 1711 aa13.84□□□□□ -0.19
HDAC6-203ENST00000376619 MAP3K4Q9Y6R4 1608 aa13.84□□□□□ -0.19
HDAC6-203ENST00000376619 DUOX2Q9NRD8 1548 aa13.84□□□□□ -0.19
HDAC6-203ENST00000376619 RPGRIP1LQ68CZ1 1315 aa13.84□□□□□ -0.19
HDAC6-203ENST00000376619 PROSER2Q86WR7 435 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-203ENST00000376619 KIF16BQ96L93 1317 aa13.84□□□□□ -0.19
HDAC6-203ENST00000376619 BRPF3Q9ULD4 1205 aa13.83□□□□□ -0.19
HDAC6-203ENST00000376619 TRIM44Q96DX7 344 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-203ENST00000376619 HECW2Q9P2P5 1572 aa13.83□□□□□ -0.2
HDAC6-203ENST00000376619 UHRF1BP1Q6BDS2 1440 aa13.83□□□□□ -0.2
HDAC6-203ENST00000376619 POLKQ9UBT6 870 aa13.83□□□□□ -0.2
HDAC6-203ENST00000376619 EXOC6BQ9Y2D4 811 aa13.83□□□□□ -0.2
HDAC6-203ENST00000376619 ADGRL2O95490 1459 aa13.83□□□□□ -0.2
HDAC6-203ENST00000376619 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-203ENST00000376619 IL1RAPL2Q9NP60 686 aa13.82□□□□□ -0.2
HDAC6-203ENST00000376619 FCHSD2O94868 740 aa13.82□□□□□ -0.2
HDAC6-203ENST00000376619 NFE2L2Q16236 605 aa13.82□□□□□ -0.2
HDAC6-203ENST00000376619 SYTL4Q96C24 671 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-203ENST00000376619 GSE1Q14687 1217 aa13.81□□□□□ -0.2
HDAC6-203ENST00000376619 ANO2Q9NQ90 1003 aa13.81□□□□□ -0.2
HDAC6-203ENST00000376619 C9orf78Q9NZ63 289 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-203ENST00000376619 ACEP12821 1306 aa13.81□□□□□ -0.2
HDAC6-203ENST00000376619 C1orf141Q5JVX7 400 aa13.8□□□□□ -0.2
HDAC6-203ENST00000376619 C8orf58Q8NAV2 365 aa13.8□□□□□ -0.2
HDAC6-203ENST00000376619 API5Q9BZZ5 524 aaKnown RBP13.8□□□□□ -0.2
HDAC6-203ENST00000376619 LRPPRCP42704 1394 aaKnown RBP13.8□□□□□ -0.2
HDAC6-203ENST00000376619 HMMRO75330 724 aa13.8□□□□□ -0.2
HDAC6-203ENST00000376619 A0A1W2PP64 1363 aa13.8□□□□□ -0.2
HDAC6-203ENST00000376619 NKTRP30414 1462 aaKnown RBP13.8□□□□□ -0.2
HDAC6-203ENST00000376619 MBIPQ9NS73 344 aa13.79□□□□□ -0.2
HDAC6-203ENST00000376619 ATAD2Q6PL18 1390 aa13.79□□□□□ -0.2
HDAC6-203ENST00000376619 DDX54Q8TDD1 881 aaKnown RBP13.78□□□□□ -0.2
HDAC6-203ENST00000376619 KIAA1211Q6ZU35 1233 aa13.77□□□□□ -0.2
HDAC6-203ENST00000376619 ARID3AQ99856 593 aa13.77□□□□□ -0.2
HDAC6-203ENST00000376619 DTNBO60941 627 aa13.77□□□□□ -0.21
HDAC6-203ENST00000376619 SURF6O75683 361 aaKnown RBP13.77□□□□□ -0.21
HDAC6-203ENST00000376619 HDGFL1Q5TGJ6 251 aa13.77□□□□□ -0.21
HDAC6-203ENST00000376619 MPRIPQ6WCQ1 1025 aa13.77□□□□□ -0.21
HDAC6-203ENST00000376619 JARID2Q92833 1246 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-203ENST00000376619 MYL6BP14649 208 aa13.77□□□□□ -0.21
HDAC6-203ENST00000376619 C16orf71Q8IYS4 520 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-203ENST00000376619 SIL1Q9H173 461 aa13.77□□□□□ -0.21
HDAC6-203ENST00000376619 SHANK2Q9UPX8 1470 aa13.76□□□□□ -0.21
HDAC6-203ENST00000376619 GCC2Q8IWJ2 1684 aa13.76□□□□□ -0.21
HDAC6-203ENST00000376619 PIP4K2AP48426 406 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-203ENST00000376619 CHD1LQ86WJ1 897 aa13.76□□□□□ -0.21
HDAC6-203ENST00000376619 LARP6Q9BRS8 491 aaKnown RBP13.76□□□□□ -0.21
HDAC6-203ENST00000376619 STRN4Q9NRL3 753 aa13.75□□□□□ -0.21
HDAC6-203ENST00000376619 KAT6BQ8WYB5 2073 aa13.75□□□□□ -0.21
HDAC6-203ENST00000376619 ASXL1Q8IXJ9 1541 aa13.75□□□□□ -0.21
HDAC6-203ENST00000376619 PTMAP06454 111 aaKnown RBP13.75□□□□□ -0.21
HDAC6-203ENST00000376619 NPATQ14207 1427 aa13.75□□□□□ -0.21
HDAC6-203ENST00000376619 FAM177BA6PVY3 158 aa13.75□□□□□ -0.21
HDAC6-203ENST00000376619 ZNF530Q6P9A1 599 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms