RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 STAC3Q96MF2 364 aa14.44□□□□□ -0.1
TM9SF2-201ENST00000376387 CCDC27Q2M243 656 aa14.44□□□□□ -0.1
TM9SF2-201ENST00000376387 NCOA3Q9Y6Q9 1424 aa14.44□□□□□ -0.1
TM9SF2-201ENST00000376387 DDX11L8A8MPP1 907 aa14.44□□□□□ -0.1
TM9SF2-201ENST00000376387 CD2BP2O95400 341 aaKnown RBP14.44□□□□□ -0.1
TM9SF2-201ENST00000376387 HDAC1Q13547 482 aaPredicted RBP14.43□□□□□ -0.1
TM9SF2-201ENST00000376387 NOB1Q9ULX3 412 aaKnown RBP14.43□□□□□ -0.1
TM9SF2-201ENST00000376387 KANK1Q14678 1352 aa14.43□□□□□ -0.1
TM9SF2-201ENST00000376387 TMEM57Q8N5G2 664 aa14.43□□□□□ -0.1
TM9SF2-201ENST00000376387 LNPKQ9C0E8 428 aa14.43□□□□□ -0.1
TM9SF2-201ENST00000376387 TET3O43151 1660 aa14.42□□□□□ -0.1
TM9SF2-201ENST00000376387 TMEM132EQ6IEE7 984 aa14.42□□□□□ -0.1
TM9SF2-201ENST00000376387 KIF3BO15066 747 aa14.42□□□□□ -0.1
TM9SF2-201ENST00000376387 FBXO3Q9UK99 471 aa14.42□□□□□ -0.1
TM9SF2-201ENST00000376387 MROH2AA6NES4 1674 aa14.42□□□□□ -0.1
TM9SF2-201ENST00000376387 SMC5Q8IY18 1101 aa14.41□□□□□ -0.1
TM9SF2-201ENST00000376387 ARAP3Q8WWN8 1544 aa14.41□□□□□ -0.1
TM9SF2-201ENST00000376387 ZFYVE16Q7Z3T8 1539 aa14.41□□□□□ -0.1
TM9SF2-201ENST00000376387 KIF2CQ99661 725 aa14.41□□□□□ -0.1
TM9SF2-201ENST00000376387 RBM25P49756 843 aaKnown RBP14.4□□□□□ -0.1
TM9SF2-201ENST00000376387 RBM42Q9BTD8 480 aaKnown RBP14.4□□□□□ -0.1
TM9SF2-201ENST00000376387 DEPDC5O75140 1603 aa14.4□□□□□ -0.1
TM9SF2-201ENST00000376387 ATF7IPQ6VMQ6 1270 aa14.4□□□□□ -0.1
TM9SF2-201ENST00000376387 MYO3AQ8NEV4 1616 aa14.4□□□□□ -0.1
TM9SF2-201ENST00000376387 MYOM2P54296 1465 aa14.4□□□□□ -0.1
TM9SF2-201ENST00000376387 HSP90AB1P08238 724 aaKnown RBP14.4□□□□□ -0.1
TM9SF2-201ENST00000376387 CHGAP10645 457 aaKnown RBP14.4□□□□□ -0.1
TM9SF2-201ENST00000376387 CD109Q6YHK3 1445 aa14.39□□□□□ -0.11
TM9SF2-201ENST00000376387 RRP9O43818 475 aaKnown RBP14.39□□□□□ -0.11
TM9SF2-201ENST00000376387 CFAP53Q96M91 514 aa14.39□□□□□ -0.11
TM9SF2-201ENST00000376387 DDX19BQ9UMR2 479 aa14.39□□□□□ -0.11
TM9SF2-201ENST00000376387 TRIM35Q9UPQ4 493 aa14.39□□□□□ -0.11
TM9SF2-201ENST00000376387 ZBTB40Q9NUA8 1239 aa14.39□□□□□ -0.11
TM9SF2-201ENST00000376387 NOS1P29475 1434 aa14.39□□□□□ -0.11
TM9SF2-201ENST00000376387 RAB3GAP1Q15042 981 aa14.38□□□□□ -0.11
TM9SF2-201ENST00000376387 IFT172Q9UG01 1749 aa14.38□□□□□ -0.11
TM9SF2-201ENST00000376387 SNX21Q969T3 373 aa14.38□□□□□ -0.11
TM9SF2-201ENST00000376387 TRIM44Q96DX7 344 aaPredicted RBP14.38□□□□□ -0.11
TM9SF2-201ENST00000376387 U2SURPO15042 1029 aaKnown RBP14.38□□□□□ -0.11
TM9SF2-201ENST00000376387 HSP90B1P14625 803 aaKnown RBP14.38□□□□□ -0.11
TM9SF2-201ENST00000376387 TMED8Q6PL24 325 aaPredicted RBP14.38□□□□□ -0.11
TM9SF2-201ENST00000376387 QRICH2Q9H0J4 1663 aa14.38□□□□□ -0.11
TM9SF2-201ENST00000376387 NUCB1Q02818 461 aa14.37□□□□□ -0.11
TM9SF2-201ENST00000376387 KIF1BO60333 1816 aa14.37□□□□□ -0.11
TM9SF2-201ENST00000376387 SBNO2Q9Y2G9 1366 aa14.37□□□□□ -0.11
TM9SF2-201ENST00000376387 ABCA9Q8IUA7 1624 aa14.37□□□□□ -0.11
TM9SF2-201ENST00000376387 ADGRB2O60241 1585 aa14.37□□□□□ -0.11
TM9SF2-201ENST00000376387 SSFA2P28290 1259 aa14.37□□□□□ -0.11
TM9SF2-201ENST00000376387 AK9Q5TCS8 1911 aa14.36□□□□□ -0.11
TM9SF2-201ENST00000376387 PLEKHF1Q96S99 279 aa14.36□□□□□ -0.11
TM9SF2-201ENST00000376387 ZC3H13Q5T200 1668 aaKnown RBP14.36□□□□□ -0.11
TM9SF2-201ENST00000376387 TMPOP42166 694 aaKnown RBP14.36□□□□□ -0.11
TM9SF2-201ENST00000376387 VWDEQ8N2E2 1590 aa14.36□□□□□ -0.11
TM9SF2-201ENST00000376387 SENP3Q9H4L4 574 aaPredicted RBP14.35□□□□□ -0.11
TM9SF2-201ENST00000376387 C1orf115Q9H7X2 142 aa14.35□□□□□ -0.11
TM9SF2-201ENST00000376387 CHD1LQ86WJ1 897 aa14.35□□□□□ -0.11
TM9SF2-201ENST00000376387 GBP4Q96PP9 640 aa14.35□□□□□ -0.11
TM9SF2-201ENST00000376387 ASXL2Q76L83 1435 aa14.35□□□□□ -0.11
TM9SF2-201ENST00000376387 NUTM2DQ5VT03 806 aaPredicted RBP14.34□□□□□ -0.11
TM9SF2-201ENST00000376387 GAS2L2Q8NHY3 880 aa14.34□□□□□ -0.11
TM9SF2-201ENST00000376387 NRXN1Q9ULB1 1477 aa14.34□□□□□ -0.11
TM9SF2-201ENST00000376387 CFAP65Q6ZU64 1925 aaKnown RBP14.34□□□□□ -0.11
TM9SF2-201ENST00000376387 KCNG1Q9UIX4 513 aa14.34□□□□□ -0.11
TM9SF2-201ENST00000376387 CCDC9Q9Y3X0 531 aaKnown RBP14.34□□□□□ -0.11
TM9SF2-201ENST00000376387 MROH1Q8NDA8 1641 aa14.34□□□□□ -0.11
TM9SF2-201ENST00000376387 CABP2Q9NPB3 220 aa14.33□□□□□ -0.12
TM9SF2-201ENST00000376387 ISY1Q9ULR0 285 aaKnown RBP14.33□□□□□ -0.12
TM9SF2-201ENST00000376387 ANKRD45Q5TZF3 282 aa14.33□□□□□ -0.12
TM9SF2-201ENST00000376387 SAFB2Q14151 953 aaKnown RBP eCLIP14.32□□□□□ -0.12
TM9SF2-201ENST00000376387 ZNF526Q8TF50 670 aaPredicted RBP14.32□□□□□ -0.12
TM9SF2-201ENST00000376387 TBC1D9Q6ZT07 1266 aa14.32□□□□□ -0.12
TM9SF2-201ENST00000376387 GGNBP2Q9H3C7 697 aa14.32□□□□□ -0.12
TM9SF2-201ENST00000376387 CIZ1Q9ULV3 898 aaPredicted RBP14.32□□□□□ -0.12
TM9SF2-201ENST00000376387 CT47B1P0C2W7 299 aaPredicted RBP14.31□□□□□ -0.12
TM9SF2-201ENST00000376387 USP32Q8NFA0 1604 aa14.31□□□□□ -0.12
TM9SF2-201ENST00000376387 NEURL4Q96JN8 1562 aa14.31□□□□□ -0.12
TM9SF2-201ENST00000376387 RIPK4P57078 832 aa14.31□□□□□ -0.12
TM9SF2-201ENST00000376387 KIAA1211Q6ZU35 1233 aa14.31□□□□□ -0.12
TM9SF2-201ENST00000376387 ATP7AQ04656 1500 aa14.31□□□□□ -0.12
TM9SF2-201ENST00000376387 K7ELQ4 463 aaPredicted RBP14.31□□□□□ -0.12
TM9SF2-201ENST00000376387 C14orf93Q9H972 538 aaKnown RBP14.31□□□□□ -0.12
TM9SF2-201ENST00000376387 BCCIPQ9P287 314 aaKnown RBP eCLIP14.31□□□□□ -0.12
TM9SF2-201ENST00000376387 GTF2E1P29083 439 aaPredicted RBP14.3□□□□□ -0.12
TM9SF2-201ENST00000376387 NASPP49321 788 aaPredicted RBP14.3□□□□□ -0.12
TM9SF2-201ENST00000376387 BMP2KLQ5H9B9 411 aa14.3□□□□□ -0.12
TM9SF2-201ENST00000376387 ADGRB1O14514 1584 aa14.3□□□□□ -0.12
TM9SF2-201ENST00000376387 PPIP5K1Q6PFW1 1433 aa14.3□□□□□ -0.12
TM9SF2-201ENST00000376387 ZNF592Q92610 1267 aa14.3□□□□□ -0.12
TM9SF2-201ENST00000376387 CFAP74Q9C0B2 1584 aa14.3□□□□□ -0.12
TM9SF2-201ENST00000376387 INO80Q9ULG1 1556 aaPredicted RBP14.3□□□□□ -0.12
TM9SF2-201ENST00000376387 PPRC1Q5VV67 1664 aaKnown RBP14.3□□□□□ -0.12
TM9SF2-201ENST00000376387 SKOR2Q2VWA4 1001 aaPredicted RBP14.29□□□□□ -0.12
TM9SF2-201ENST00000376387 ADGRL1O94910 1474 aa14.29□□□□□ -0.12
TM9SF2-201ENST00000376387 SETBP1Q9Y6X0 1596 aa14.29□□□□□ -0.12
TM9SF2-201ENST00000376387 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
TM9SF2-201ENST00000376387 PPP1R9BQ96SB3 815 aa14.28□□□□□ -0.12
TM9SF2-201ENST00000376387 BAG4O95429 457 aaKnown RBP14.28□□□□□ -0.12
TM9SF2-201ENST00000376387 DDX49Q9Y6V7 483 aaKnown RBP14.28□□□□□ -0.12
TM9SF2-201ENST00000376387 EFCAB6Q5THR3 1501 aa14.28□□□□□ -0.12
TM9SF2-201ENST00000376387 TULP4Q9NRJ4 1543 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms