RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 TRPM2O94759 1503 aa13.24□□□□□ -0.29
ZNF549-202ENST00000376233 POLR1AO95602 1720 aaPredicted RBP13.24□□□□□ -0.29
ZNF549-202ENST00000376233 A0A1W2PP64 1363 aa13.23□□□□□ -0.29
ZNF549-202ENST00000376233 SLC26A8Q96RN1 970 aa13.23□□□□□ -0.29
ZNF549-202ENST00000376233 PLXNC1O60486 1568 aa13.22□□□□□ -0.29
ZNF549-202ENST00000376233 TRIM44Q96DX7 344 aaPredicted RBP13.22□□□□□ -0.29
ZNF549-202ENST00000376233 INSRP06213 1382 aa13.22□□□□□ -0.29
ZNF549-202ENST00000376233 NCKAP5LQ9HCH0 1330 aa13.22□□□□□ -0.29
ZNF549-202ENST00000376233 FAM83GA6ND36 823 aa13.22□□□□□ -0.29
ZNF549-202ENST00000376233 HAP1P54257 671 aaPredicted RBP13.22□□□□□ -0.29
ZNF549-202ENST00000376233 TRMT2AQ8IZ69 625 aaKnown RBP13.22□□□□□ -0.29
ZNF549-202ENST00000376233 NUDT16Q96DE0 195 aaKnown RBP13.22□□□□□ -0.29
ZNF549-202ENST00000376233 NFE2L2Q16236 605 aa13.21□□□□□ -0.29
ZNF549-202ENST00000376233 L1TD1Q5T7N2 865 aaKnown RBP13.21□□□□□ -0.29
ZNF549-202ENST00000376233 NOL8Q76FK4 1167 aaKnown RBP13.21□□□□□ -0.29
ZNF549-202ENST00000376233 STK31Q9BXU1 1019 aa13.21□□□□□ -0.29
ZNF549-202ENST00000376233 API5Q9BZZ5 524 aaKnown RBP13.21□□□□□ -0.29
ZNF549-202ENST00000376233 EID1Q9Y6B2 187 aa13.21□□□□□ -0.29
ZNF549-202ENST00000376233 ZFYVE16Q7Z3T8 1539 aa13.21□□□□□ -0.29
ZNF549-202ENST00000376233 CT47B1P0C2W7 299 aaPredicted RBP13.21□□□□□ -0.29
ZNF549-202ENST00000376233 GOLGA6L3A6NEY3 463 aa13.21□□□□□ -0.3
ZNF549-202ENST00000376233 CLTCL1P53675 1640 aa13.21□□□□□ -0.3
ZNF549-202ENST00000376233 TBC1D2Q9BYX2 928 aa13.2□□□□□ -0.3
ZNF549-202ENST00000376233 UHRF1BP1LA0JNW5 1464 aa13.2□□□□□ -0.3
ZNF549-202ENST00000376233 MIS18AQ9NYP9 233 aa13.2□□□□□ -0.3
ZNF549-202ENST00000376233 CHMP5Q9NZZ3 219 aa13.2□□□□□ -0.3
ZNF549-202ENST00000376233 FOXD4L5Q5VV16 416 aaPredicted RBP13.19□□□□□ -0.3
ZNF549-202ENST00000376233 CHD1LQ86WJ1 897 aa13.19□□□□□ -0.3
ZNF549-202ENST00000376233 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.19□□□□□ -0.3
ZNF549-202ENST00000376233 FOXD4L4Q8WXT5 416 aaPredicted RBP13.19□□□□□ -0.3
ZNF549-202ENST00000376233 PHACTR3Q96KR7 559 aa13.19□□□□□ -0.3
ZNF549-202ENST00000376233 CCDC61Q9Y6R9 512 aa13.19□□□□□ -0.3
ZNF549-202ENST00000376233 TRHP20396 242 aaPredicted RBP13.18□□□□□ -0.3
ZNF549-202ENST00000376233 CCDC27Q2M243 656 aa13.18□□□□□ -0.3
ZNF549-202ENST00000376233 GBP4Q96PP9 640 aa13.18□□□□□ -0.3
ZNF549-202ENST00000376233 OS9Q13438 667 aaPredicted RBP13.18□□□□□ -0.3
ZNF549-202ENST00000376233 MCM10Q7L590 875 aa13.18□□□□□ -0.3
ZNF549-202ENST00000376233 TRIM6-TRIM34B2RNG4 842 aa13.18□□□□□ -0.3
ZNF549-202ENST00000376233 POLKQ9UBT6 870 aa13.18□□□□□ -0.3
ZNF549-202ENST00000376233 NSD2O96028 1365 aa13.18□□□□□ -0.3
ZNF549-202ENST00000376233 TSPYL4Q9UJ04 414 aa13.18□□□□□ -0.3
ZNF549-202ENST00000376233 KDM5AP29375 1690 aaKnown RBP13.18□□□□□ -0.3
ZNF549-202ENST00000376233 SYNMO15061 1565 aa13.17□□□□□ -0.3
ZNF549-202ENST00000376233 TSPYL6Q8N831 410 aa13.17□□□□□ -0.3
ZNF549-202ENST00000376233 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
ZNF549-202ENST00000376233 WASLO00401 505 aaPredicted RBP13.17□□□□□ -0.3
ZNF549-202ENST00000376233 E9PCH4 1651 aa13.16□□□□□ -0.3
ZNF549-202ENST00000376233 HMMRO75330 724 aa13.16□□□□□ -0.3
ZNF549-202ENST00000376233 TBC1D32Q96NH3 1257 aa13.16□□□□□ -0.3
ZNF549-202ENST00000376233 MADDQ8WXG6 1647 aa13.15□□□□□ -0.3
ZNF549-202ENST00000376233 NAP1L5Q96NT1 182 aaPredicted RBP13.15□□□□□ -0.3
ZNF549-202ENST00000376233 MBIPQ9NS73 344 aa13.15□□□□□ -0.3
ZNF549-202ENST00000376233 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
ZNF549-202ENST00000376233 FKBP5Q13451 457 aaPredicted RBP13.15□□□□□ -0.3
ZNF549-202ENST00000376233 RILPL2Q969X0 211 aa13.15□□□□□ -0.3
ZNF549-202ENST00000376233 EIF2S2P20042 333 aaKnown RBP13.14□□□□□ -0.31
ZNF549-202ENST00000376233 NLRP6P59044 892 aa13.14□□□□□ -0.31
ZNF549-202ENST00000376233 POGZQ7Z3K3 1410 aa13.14□□□□□ -0.31
ZNF549-202ENST00000376233 ABCC11Q96J66 1382 aa13.14□□□□□ -0.31
ZNF549-202ENST00000376233 SBNO2Q9Y2G9 1366 aa13.14□□□□□ -0.31
ZNF549-202ENST00000376233 CEBPAP49715 358 aaPredicted RBP13.13□□□□□ -0.31
ZNF549-202ENST00000376233 FOXD4L6Q3SYB3 417 aaPredicted RBP13.13□□□□□ -0.31
ZNF549-202ENST00000376233 FOXD4L3Q6VB84 417 aaPredicted RBP13.13□□□□□ -0.31
ZNF549-202ENST00000376233 AEBP1Q8IUX7 1158 aa13.13□□□□□ -0.31
ZNF549-202ENST00000376233 KRT24Q2M2I5 525 aa13.13□□□□□ -0.31
ZNF549-202ENST00000376233 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
ZNF549-202ENST00000376233 TRAK2O60296 914 aa13.12□□□□□ -0.31
ZNF549-202ENST00000376233 ALDH1L2Q3SY69 923 aa13.12□□□□□ -0.31
ZNF549-202ENST00000376233 C8orf58Q8NAV2 365 aa13.12□□□□□ -0.31
ZNF549-202ENST00000376233 YTHDC2Q9H6S0 1430 aaKnown RBP13.12□□□□□ -0.31
ZNF549-202ENST00000376233 YEATS2Q9ULM3 1422 aa13.12□□□□□ -0.31
ZNF549-202ENST00000376233 MYOM2P54296 1465 aa13.12□□□□□ -0.31
ZNF549-202ENST00000376233 CDC45O75419 566 aa13.12□□□□□ -0.31
ZNF549-202ENST00000376233 TET3O43151 1660 aa13.11□□□□□ -0.31
ZNF549-202ENST00000376233 DDX11L8A8MPP1 907 aa13.11□□□□□ -0.31
ZNF549-202ENST00000376233 SMARCA5O60264 1052 aaPredicted RBP13.11□□□□□ -0.31
ZNF549-202ENST00000376233 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
ZNF549-202ENST00000376233 PUS7Q96PZ0 661 aaKnown RBP13.11□□□□□ -0.31
ZNF549-202ENST00000376233 IFT57Q9NWB7 429 aa13.11□□□□□ -0.31
ZNF549-202ENST00000376233 SPHKAPQ2M3C7 1700 aa13.11□□□□□ -0.31
ZNF549-202ENST00000376233 MCM4P33991 863 aa13.1□□□□□ -0.31
ZNF549-202ENST00000376233 DDX49Q9Y6V7 483 aaKnown RBP13.1□□□□□ -0.31
ZNF549-202ENST00000376233 HDAC1Q13547 482 aaPredicted RBP13.1□□□□□ -0.31
ZNF549-202ENST00000376233 ZBTB40Q9NUA8 1239 aa13.1□□□□□ -0.31
ZNF549-202ENST00000376233 F6X3S4 739 aa13.1□□□□□ -0.31
ZNF549-202ENST00000376233 HSP90AB2PQ58FF8 381 aa13.1□□□□□ -0.31
ZNF549-202ENST00000376233 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
ZNF549-202ENST00000376233 ZNF428Q96B54 188 aa13.09□□□□□ -0.31
ZNF549-202ENST00000376233 IL16Q14005 1332 aa13.09□□□□□ -0.31
ZNF549-202ENST00000376233 VAMP4O75379 141 aa13.09□□□□□ -0.31
ZNF549-202ENST00000376233 MAP3K4Q9Y6R4 1608 aa13.09□□□□□ -0.31
ZNF549-202ENST00000376233 MCCP23508 829 aa13.09□□□□□ -0.31
ZNF549-202ENST00000376233 RBM33Q96EV2 1170 aaKnown RBP13.09□□□□□ -0.31
ZNF549-202ENST00000376233 ST18O60284 1047 aa13.08□□□□□ -0.31
ZNF549-202ENST00000376233 CFAP44Q96MT7 982 aa13.08□□□□□ -0.31
ZNF549-202ENST00000376233 EFCAB6Q5THR3 1501 aa13.08□□□□□ -0.32
ZNF549-202ENST00000376233 ANO8Q9HCE9 1232 aaPredicted RBP13.08□□□□□ -0.32
ZNF549-202ENST00000376233 KIF1BO60333 1816 aa13.08□□□□□ -0.32
ZNF549-202ENST00000376233 KCNJ4P48050 445 aa13.08□□□□□ -0.32
ZNF549-202ENST00000376233 NUCB1Q02818 461 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms