RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 RBM6P78332 1123 aaKnown RBP24.43■■□□□ 1.5
C6orf48-207ENST00000375642 TNS3Q68CZ2 1445 aa24.43■■□□□ 1.5
C6orf48-207ENST00000375642 HSPA5P11021 654 aaKnown RBP24.41■■□□□ 1.5
C6orf48-207ENST00000375642 TMC1Q8TDI8 760 aa24.41■■□□□ 1.5
C6orf48-207ENST00000375642 ARHGEF10O15013 1369 aa24.41■■□□□ 1.5
C6orf48-207ENST00000375642 QTRT2Q9H974 415 aaKnown RBP24.4■■□□□ 1.5
C6orf48-207ENST00000375642 CDCA8Q53HL2 280 aa24.39■■□□□ 1.49
C6orf48-207ENST00000375642 ZNF692Q9BU19 519 aaPredicted RBP24.38■■□□□ 1.49
C6orf48-207ENST00000375642 NGLY1Q96IV0 654 aa24.37■■□□□ 1.49
C6orf48-207ENST00000375642 SLC12A5Q9H2X9 1139 aa24.36■■□□□ 1.49
C6orf48-207ENST00000375642 BRD4O60885 1362 aaPredicted RBP24.35■■□□□ 1.49
C6orf48-207ENST00000375642 ADAMTS2O95450 1211 aa24.35■■□□□ 1.49
C6orf48-207ENST00000375642 PLEKHG5O94827 1062 aa24.34■■□□□ 1.49
C6orf48-207ENST00000375642 COL22A1Q8NFW1 1626 aaPredicted RBP24.34■■□□□ 1.49
C6orf48-207ENST00000375642 TRPM3Q9HCF6 1732 aaPredicted RBP24.33■■□□□ 1.49
C6orf48-207ENST00000375642 HAP1P54257 671 aaPredicted RBP24.33■■□□□ 1.49
C6orf48-207ENST00000375642 TERF2IPQ9NYB0 399 aa24.33■■□□□ 1.49
C6orf48-207ENST00000375642 USP6P35125 1406 aa24.33■■□□□ 1.49
C6orf48-207ENST00000375642 NINLQ9Y2I6 1382 aa24.32■■□□□ 1.48
C6orf48-207ENST00000375642 HDGFL2Q7Z4V5 671 aaPredicted RBP24.32■■□□□ 1.48
C6orf48-207ENST00000375642 ABTB2Q8N961 1025 aa24.32■■□□□ 1.48
C6orf48-207ENST00000375642 CABLES1Q8TDN4 633 aa24.32■■□□□ 1.48
C6orf48-207ENST00000375642 CPSF1Q10570 1443 aaKnown RBP24.32■■□□□ 1.48
C6orf48-207ENST00000375642 KTN1Q86UP2 1357 aaKnown RBP24.31■■□□□ 1.48
C6orf48-207ENST00000375642 SRCAPQ6ZRS2 3230 aa24.3■■□□□ 1.48
C6orf48-207ENST00000375642 NUTM2GQ5VZR2 741 aa24.28■■□□□ 1.48
C6orf48-207ENST00000375642 ALS2Q96Q42 1657 aa24.27■■□□□ 1.48
C6orf48-207ENST00000375642 SSH2Q76I76 1423 aa24.27■■□□□ 1.48
C6orf48-207ENST00000375642 ZRANB1Q9UGI0 708 aa24.27■■□□□ 1.48
C6orf48-207ENST00000375642 TTC21BQ7Z4L5 1316 aa24.27■■□□□ 1.48
C6orf48-207ENST00000375642 CD163L1Q9NR16 1453 aa24.26■■□□□ 1.47
C6orf48-207ENST00000375642 NLRP13Q86W25 1043 aa24.25■■□□□ 1.47
C6orf48-207ENST00000375642 POLR3GLQ9BT43 218 aa24.25■■□□□ 1.47
C6orf48-207ENST00000375642 USP21Q9UK80 565 aa24.25■■□□□ 1.47
C6orf48-207ENST00000375642 NLRP6P59044 892 aa24.24■■□□□ 1.47
C6orf48-207ENST00000375642 TRPC5Q9UL62 973 aaPredicted RBP24.24■■□□□ 1.47
C6orf48-207ENST00000375642 TTC21AQ8NDW8 1320 aa24.24■■□□□ 1.47
C6orf48-207ENST00000375642 A0A1W2PP64 1363 aa24.24■■□□□ 1.47
C6orf48-207ENST00000375642 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.22■■□□□ 1.47
C6orf48-207ENST00000375642 AKAP12Q02952 1782 aa24.21■■□□□ 1.47
C6orf48-207ENST00000375642 ANKRD36BQ8N2N9 1353 aa24.21■■□□□ 1.47
C6orf48-207ENST00000375642 EDC4Q6P2E9 1401 aaKnown RBP24.19■■□□□ 1.46
C6orf48-207ENST00000375642 C11orf95C9JLR9 678 aaPredicted RBP24.19■■□□□ 1.46
C6orf48-207ENST00000375642 FNBP4Q8N3X1 1017 aaPredicted RBP24.19■■□□□ 1.46
C6orf48-207ENST00000375642 USP19O94966 1318 aa24.18■■□□□ 1.46
C6orf48-207ENST00000375642 MON2Q7Z3U7 1717 aa24.16■■□□□ 1.46
C6orf48-207ENST00000375642 FAM83GA6ND36 823 aa24.16■■□□□ 1.46
C6orf48-207ENST00000375642 GCP02774 474 aa24.16■■□□□ 1.46
C6orf48-207ENST00000375642 NME9Q86XW9 330 aa24.16■■□□□ 1.46
C6orf48-207ENST00000375642 ZEB1P37275 1124 aaPredicted RBP24.15■■□□□ 1.46
C6orf48-207ENST00000375642 ZC3H6P61129 1189 aaKnown RBP24.15■■□□□ 1.46
C6orf48-207ENST00000375642 ATRNO75882 1429 aa24.15■■□□□ 1.46
C6orf48-207ENST00000375642 NRKQ7Z2Y5 1582 aa24.14■■□□□ 1.45
C6orf48-207ENST00000375642 CCDC125Q86Z20 511 aa24.14■■□□□ 1.45
C6orf48-207ENST00000375642 PRDM11Q9NQV5 511 aa24.14■■□□□ 1.45
C6orf48-207ENST00000375642 ABCA3Q99758 1704 aa24.13■■□□□ 1.45
C6orf48-207ENST00000375642 PIK3C2AO00443 1686 aa24.13■■□□□ 1.45
C6orf48-207ENST00000375642 USP31Q70CQ4 1352 aa24.12■■□□□ 1.45
C6orf48-207ENST00000375642 KIAA0232Q92628 1395 aa24.12■■□□□ 1.45
C6orf48-207ENST00000375642 KIF7Q2M1P5 1343 aa24.11■■□□□ 1.45
C6orf48-207ENST00000375642 KCNH5Q8NCM2 988 aa24.11■■□□□ 1.45
C6orf48-207ENST00000375642 MARF1Q9Y4F3 1742 aaKnown RBP24.1■■□□□ 1.45
C6orf48-207ENST00000375642 CRYBG1Q9Y4K1 1723 aa24.1■■□□□ 1.45
C6orf48-207ENST00000375642 UNC5CLQ8IV45 518 aa24.1■■□□□ 1.45
C6orf48-207ENST00000375642 CARD14Q9BXL6 1004 aa24.1■■□□□ 1.45
C6orf48-207ENST00000375642 BCL9LQ86UU0 1499 aa24.09■■□□□ 1.45
C6orf48-207ENST00000375642 PHRF1Q9P1Y6 1649 aaKnown RBP24.09■■□□□ 1.45
C6orf48-207ENST00000375642 SLIT2O94813 1529 aa24.09■■□□□ 1.45
C6orf48-207ENST00000375642 MYOM1P52179 1685 aa24.08■■□□□ 1.45
C6orf48-207ENST00000375642 CPDO75976 1380 aa24.08■■□□□ 1.45
C6orf48-207ENST00000375642 SOX12O15370 315 aa24.08■■□□□ 1.45
C6orf48-207ENST00000375642 CHRNA2Q15822 529 aa24.08■■□□□ 1.45
C6orf48-207ENST00000375642 BTG4Q9NY30 223 aa24.08■■□□□ 1.45
C6orf48-207ENST00000375642 SLIT3O75094 1523 aa24.07■■□□□ 1.44
C6orf48-207ENST00000375642 COG3Q96JB2 828 aa24.07■■□□□ 1.44
C6orf48-207ENST00000375642 PANK3Q9H999 370 aa24.07■■□□□ 1.44
C6orf48-207ENST00000375642 EP400Q96L91 3159 aa24.06■■□□□ 1.44
C6orf48-207ENST00000375642 NSD3Q9BZ95 1437 aa24.05■■□□□ 1.44
C6orf48-207ENST00000375642 ZBTB7CA1YPR0 619 aa24.05■■□□□ 1.44
C6orf48-207ENST00000375642 FYB1O15117 783 aa24.05■■□□□ 1.44
C6orf48-207ENST00000375642 COL14A1Q05707 1796 aaKnown RBP24.03■■□□□ 1.44
C6orf48-207ENST00000375642 GGNBP2Q9H3C7 697 aa24.03■■□□□ 1.44
C6orf48-207ENST00000375642 WASHC2AQ641Q2 1341 aa24.03■■□□□ 1.44
C6orf48-207ENST00000375642 CCDC7Q96M83 1385 aa24.03■■□□□ 1.44
C6orf48-207ENST00000375642 OVOS2A0A0J9YW53 1432 aa24.02■■□□□ 1.44
C6orf48-207ENST00000375642 OVOS2Q6IE36 1432 aa24.02■■□□□ 1.44
C6orf48-207ENST00000375642 ARHGEF25Q86VW2 580 aa24.02■■□□□ 1.44
C6orf48-207ENST00000375642 CGNL1Q0VF96 1302 aa24.02■■□□□ 1.44
C6orf48-207ENST00000375642 VPS72Q15906 364 aa24.01■■□□□ 1.43
C6orf48-207ENST00000375642 GJD4Q96KN9 370 aaPredicted RBP24.01■■□□□ 1.43
C6orf48-207ENST00000375642 CCDC9Q9Y3X0 531 aaKnown RBP24■■□□□ 1.43
C6orf48-207ENST00000375642 AATKQ6ZMQ8 1374 aa24■■□□□ 1.43
C6orf48-207ENST00000375642 BLMP54132 1417 aaPredicted RBP24■■□□□ 1.43
C6orf48-207ENST00000375642 PLCH1Q4KWH8 1693 aa23.99■■□□□ 1.43
C6orf48-207ENST00000375642 EVA1CP58658 441 aa23.99■■□□□ 1.43
C6orf48-207ENST00000375642 NWD2Q9ULI1 1742 aa23.98■■□□□ 1.43
C6orf48-207ENST00000375642 STRN4Q9NRL3 753 aa23.98■■□□□ 1.43
C6orf48-207ENST00000375642 NFAT5O94916 1531 aa23.97■■□□□ 1.43
C6orf48-207ENST00000375642 SF3B2Q13435 895 aaKnown RBP23.97■■□□□ 1.43
C6orf48-207ENST00000375642 USP54Q70EL1 1684 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms