RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 GBP3Q9H0R5 595 aa9.91□□□□□ -0.82
HSPG2-203ENST00000374695 WASHC2CQ9Y4E1 1318 aa9.91□□□□□ -0.82
HSPG2-203ENST00000374695 GNAI1P63096 354 aa9.91□□□□□ -0.82
HSPG2-203ENST00000374695 TMEM132AQ24JP5 1023 aa9.91□□□□□ -0.82
HSPG2-203ENST00000374695 LTV1Q96GA3 475 aaPredicted RBP9.91□□□□□ -0.82
HSPG2-203ENST00000374695 PANK3Q9H999 370 aa9.91□□□□□ -0.82
HSPG2-203ENST00000374695 TBC1D2BQ9UPU7 963 aa9.91□□□□□ -0.82
HSPG2-203ENST00000374695 TRAK2O60296 914 aa9.91□□□□□ -0.82
HSPG2-203ENST00000374695 RRP7AQ9Y3A4 280 aaKnown RBP9.91□□□□□ -0.82
HSPG2-203ENST00000374695 EVA1CP58658 441 aa9.9□□□□□ -0.82
HSPG2-203ENST00000374695 COG6Q9Y2V7 657 aa9.9□□□□□ -0.82
HSPG2-203ENST00000374695 IL27Q8NEV9 243 aa9.9□□□□□ -0.82
HSPG2-203ENST00000374695 PPM1EQ8WY54 764 aa9.9□□□□□ -0.82
HSPG2-203ENST00000374695 DNAJC2Q99543 621 aaKnown RBP9.9□□□□□ -0.82
HSPG2-203ENST00000374695 CENPHQ9H3R5 247 aa9.9□□□□□ -0.82
HSPG2-203ENST00000374695 CNTLNQ9NXG0 1405 aa9.9□□□□□ -0.82
HSPG2-203ENST00000374695 ANKRD62A6NC57 917 aa9.9□□□□□ -0.82
HSPG2-203ENST00000374695 MICALCLQ6ZW33 695 aa9.9□□□□□ -0.82
HSPG2-203ENST00000374695 SHTN1A0MZ66 631 aa9.9□□□□□ -0.82
HSPG2-203ENST00000374695 SERPINC1P01008 464 aa9.9□□□□□ -0.82
HSPG2-203ENST00000374695 RUNDC1Q96C34 613 aa9.9□□□□□ -0.82
HSPG2-203ENST00000374695 RRBP1Q9P2E9 1410 aaKnown RBP9.9□□□□□ -0.82
HSPG2-203ENST00000374695 PDS5BQ9NTI5 1447 aa9.9□□□□□ -0.83
HSPG2-203ENST00000374695 SLC4A3P48751 1232 aa9.89□□□□□ -0.83
HSPG2-203ENST00000374695 WDR33Q9C0J8 1336 aaKnown RBP9.89□□□□□ -0.83
HSPG2-203ENST00000374695 CDKL5O76039 1030 aa9.89□□□□□ -0.83
HSPG2-203ENST00000374695 POLR3GO15318 223 aaPredicted RBP9.89□□□□□ -0.83
HSPG2-203ENST00000374695 FKBP5Q13451 457 aaPredicted RBP9.89□□□□□ -0.83
HSPG2-203ENST00000374695 RAPGEF2Q9Y4G8 1499 aa9.89□□□□□ -0.83
HSPG2-203ENST00000374695 CCDC148Q8NFR7 591 aa9.89□□□□□ -0.83
HSPG2-203ENST00000374695 SETD1BQ9UPS6 1966 aaKnown RBP9.89□□□□□ -0.83
HSPG2-203ENST00000374695 TNMDQ9H2S6 317 aa9.89□□□□□ -0.83
HSPG2-203ENST00000374695 IMMTQ16891 758 aaKnown RBP9.89□□□□□ -0.83
HSPG2-203ENST00000374695 TRIM22Q8IYM9 498 aa9.89□□□□□ -0.83
HSPG2-203ENST00000374695 ZMYND15Q9H091 742 aa9.89□□□□□ -0.83
HSPG2-203ENST00000374695 EXOC6Q8TAG9 804 aa9.89□□□□□ -0.83
HSPG2-203ENST00000374695 GTPBP4Q9BZE4 634 aaKnown RBP9.89□□□□□ -0.83
HSPG2-203ENST00000374695 BCL2L13Q9BXK5 485 aa9.88□□□□□ -0.83
HSPG2-203ENST00000374695 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.88□□□□□ -0.835e-7■■■□□ 17.8
HSPG2-203ENST00000374695 CCDC7Q96M83 1385 aa9.88□□□□□ -0.83
HSPG2-203ENST00000374695 UQCRHLA0A096LP55 91 aa9.88□□□□□ -0.83
HSPG2-203ENST00000374695 UQCRHP07919 91 aa9.88□□□□□ -0.83
HSPG2-203ENST00000374695 CFAP45Q9UL16 551 aa9.88□□□□□ -0.83
HSPG2-203ENST00000374695 KRT18P05783 430 aaKnown RBP9.88□□□□□ -0.83
HSPG2-203ENST00000374695 MYO10Q9HD67 2058 aa9.88□□□□□ -0.83
HSPG2-203ENST00000374695 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.88□□□□□ -0.83
HSPG2-203ENST00000374695 SSR1P43307 286 aaKnown RBP9.88□□□□□ -0.83
HSPG2-203ENST00000374695 ESPNB1AK53 854 aa9.88□□□□□ -0.83
HSPG2-203ENST00000374695 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.88□□□□□ -0.833e-8■■■■■ 27.2
HSPG2-203ENST00000374695 VGFO15240 615 aaPredicted RBP9.88□□□□□ -0.83
HSPG2-203ENST00000374695 UBTFL1P0CB47 393 aaPredicted RBP9.88□□□□□ -0.83
HSPG2-203ENST00000374695 POTEJP0CG39 1038 aa9.88□□□□□ -0.83
HSPG2-203ENST00000374695 STK38Q15208 465 aa9.88□□□□□ -0.83
HSPG2-203ENST00000374695 L3MBTL2Q969R5 705 aa9.87□□□□□ -0.83
HSPG2-203ENST00000374695 LUZP1Q86V48 1076 aa9.87□□□□□ -0.83
HSPG2-203ENST00000374695 WASHC4Q2M389 1173 aa9.87□□□□□ -0.83
HSPG2-203ENST00000374695 TAX1BP1Q86VP1 789 aa9.87□□□□□ -0.83
HSPG2-203ENST00000374695 GNL3LQ9NVN8 582 aaKnown RBP9.87□□□□□ -0.83
HSPG2-203ENST00000374695 CFAP57Q96MR6 1250 aa9.87□□□□□ -0.83
HSPG2-203ENST00000374695 FOSBP53539 338 aa9.87□□□□□ -0.83
HSPG2-203ENST00000374695 RNF214Q8ND24 703 aa9.87□□□□□ -0.83
HSPG2-203ENST00000374695 DYNC1I1O14576 645 aa9.87□□□□□ -0.83
HSPG2-203ENST00000374695 SMG6Q86US8 1419 aaKnown RBP9.87□□□□□ -0.83
HSPG2-203ENST00000374695 DIAPH1O60610 1272 aaKnown RBP9.87□□□□□ -0.83
HSPG2-203ENST00000374695 RIPK4P57078 832 aa9.87□□□□□ -0.83
HSPG2-203ENST00000374695 ZNF397Q8NF99 534 aaPredicted RBP9.87□□□□□ -0.83
HSPG2-203ENST00000374695 CRACR2AQ9BSW2 395 aa9.86□□□□□ -0.83
HSPG2-203ENST00000374695 FSD1Q9BTV5 496 aa9.86□□□□□ -0.83
HSPG2-203ENST00000374695 TRHP20396 242 aaPredicted RBP9.86□□□□□ -0.83
HSPG2-203ENST00000374695 SKIDA1Q1XH10 827 aa9.86□□□□□ -0.83
HSPG2-203ENST00000374695 BRD4O60885 1362 aaPredicted RBP9.86□□□□□ -0.83
HSPG2-203ENST00000374695 SMTNL1A8MU46 457 aa9.86□□□□□ -0.83
HSPG2-203ENST00000374695 KRT85P78386 507 aa9.86□□□□□ -0.83
HSPG2-203ENST00000374695 C11orf95C9JLR9 678 aaPredicted RBP9.86□□□□□ -0.83
HSPG2-203ENST00000374695 MAP2K1Q02750 393 aaPredicted RBP9.86□□□□□ -0.83
HSPG2-203ENST00000374695 SOGA1O94964 1423 aa9.86□□□□□ -0.83
HSPG2-203ENST00000374695 BMP2KQ9NSY1 1161 aaPredicted RBP9.86□□□□□ -0.83
HSPG2-203ENST00000374695 KIF21BO75037 1637 aa9.86□□□□□ -0.83
HSPG2-203ENST00000374695 CETN2P41208 172 aa9.86□□□□□ -0.83
HSPG2-203ENST00000374695 GCOM1H8Y6P7 765 aaPredicted RBP9.85□□□□□ -0.83
HSPG2-203ENST00000374695 MYZAPP0CAP1 466 aa9.85□□□□□ -0.83
HSPG2-203ENST00000374695 CEP63Q96MT8 703 aa9.85□□□□□ -0.83
HSPG2-203ENST00000374695 PRKRIP1Q9H875 184 aaPredicted RBP9.85□□□□□ -0.83
HSPG2-203ENST00000374695 CIZ1Q9ULV3 898 aaPredicted RBP9.85□□□□□ -0.83
HSPG2-203ENST00000374695 ST20-MTHFSA0A0A6YYL1 179 aa9.85□□□□□ -0.83
HSPG2-203ENST00000374695 PLIN1O60240 522 aa9.85□□□□□ -0.83
HSPG2-203ENST00000374695 EIF2S2P20042 333 aaKnown RBP9.85□□□□□ -0.83
HSPG2-203ENST00000374695 CCDC27Q2M243 656 aa9.85□□□□□ -0.83
HSPG2-203ENST00000374695 STAC3Q96MF2 364 aa9.85□□□□□ -0.83
HSPG2-203ENST00000374695 SRCIN1Q9C0H9 1055 aa9.85□□□□□ -0.83
HSPG2-203ENST00000374695 NOL7Q9UMY1 257 aaKnown RBP9.85□□□□□ -0.83
HSPG2-203ENST00000374695 ANKRD18BA2A2Z9 1011 aa9.85□□□□□ -0.83
HSPG2-203ENST00000374695 CEP57L1Q8IYX8 460 aa9.85□□□□□ -0.83
HSPG2-203ENST00000374695 EPB41L2O43491 1005 aaKnown RBP9.85□□□□□ -0.83
HSPG2-203ENST00000374695 GON4LQ3T8J9 2241 aa9.85□□□□□ -0.83
HSPG2-203ENST00000374695 FIBPO43427 364 aa9.85□□□□□ -0.83
HSPG2-203ENST00000374695 TSPYL4Q9UJ04 414 aa9.85□□□□□ -0.83
HSPG2-203ENST00000374695 RIC3Q7Z5B4 369 aa9.85□□□□□ -0.83
HSPG2-203ENST00000374695 KIAA1328Q86T90 577 aa9.85□□□□□ -0.83
HSPG2-203ENST00000374695 TAF4BQ92750 862 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms