RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 APAF1O14727 1248 aa22.35■■□□□ 1.17
PTPN20-203ENST00000374342 IQSEC2Q5JU85 1478 aa22.35■■□□□ 1.17
PTPN20-203ENST00000374342 ACEP12821 1306 aa22.32■■□□□ 1.16
PTPN20-203ENST00000374342 ZNF521Q96K83 1311 aa22.32■■□□□ 1.16
PTPN20-203ENST00000374342 ZNF692Q9BU19 519 aaPredicted RBP22.31■■□□□ 1.16
PTPN20-203ENST00000374342 USP6P35125 1406 aa22.31■■□□□ 1.16
PTPN20-203ENST00000374342 PLEKHG3A1L390 1219 aa22.3■■□□□ 1.16
PTPN20-203ENST00000374342 RNF123Q5XPI4 1314 aa22.29■■□□□ 1.16
PTPN20-203ENST00000374342 ANKARQ7Z5J8 1434 aa22.29■■□□□ 1.16
PTPN20-203ENST00000374342 ZRANB1Q9UGI0 708 aa22.29■■□□□ 1.16
PTPN20-203ENST00000374342 NWD1Q149M9 1564 aa22.29■■□□□ 1.16
PTPN20-203ENST00000374342 RUNDC1Q96C34 613 aa22.29■■□□□ 1.16
PTPN20-203ENST00000374342 U2AF1L5P0DN76 240 aaPredicted RBP22.28■■□□□ 1.16
PTPN20-203ENST00000374342 U2AF1Q01081 240 aaKnown RBP eCLIP22.28■■□□□ 1.16
PTPN20-203ENST00000374342 COG3Q96JB2 828 aa22.28■■□□□ 1.16
PTPN20-203ENST00000374342 RCAN3Q9UKA8 241 aa22.27■■□□□ 1.16
PTPN20-203ENST00000374342 GOLGA2Q08379 1002 aa22.27■■□□□ 1.16
PTPN20-203ENST00000374342 CDK12Q9NYV4 1490 aaPredicted RBP22.27■■□□□ 1.15
PTPN20-203ENST00000374342 PNPLA6Q8IY17 1366 aa22.26■■□□□ 1.15
PTPN20-203ENST00000374342 TTC21BQ7Z4L5 1316 aa22.26■■□□□ 1.15
PTPN20-203ENST00000374342 U2SURPO15042 1029 aaKnown RBP22.26■■□□□ 1.15
PTPN20-203ENST00000374342 FBLN1P23142 703 aa22.25■■□□□ 1.15
PTPN20-203ENST00000374342 ERICH6BQ5W0A0 696 aa22.25■■□□□ 1.15
PTPN20-203ENST00000374342 PMFBP1Q8TBY8 1022 aa22.25■■□□□ 1.15
PTPN20-203ENST00000374342 NGEFQ8N5V2 710 aa22.25■■□□□ 1.15
PTPN20-203ENST00000374342 POLKQ9UBT6 870 aa22.25■■□□□ 1.15
PTPN20-203ENST00000374342 PPM1GO15355 546 aaPredicted RBP22.24■■□□□ 1.15
PTPN20-203ENST00000374342 OVOS2A0A0J9YW53 1432 aa22.24■■□□□ 1.15
PTPN20-203ENST00000374342 OVOS2Q6IE36 1432 aa22.24■■□□□ 1.15
PTPN20-203ENST00000374342 ADGRL3Q9HAR2 1447 aa22.24■■□□□ 1.15
PTPN20-203ENST00000374342 AATKQ6ZMQ8 1374 aa22.24■■□□□ 1.15
PTPN20-203ENST00000374342 DIAPH1O60610 1272 aaKnown RBP22.23■■□□□ 1.15
PTPN20-203ENST00000374342 PIK3C2AO00443 1686 aa22.23■■□□□ 1.15
PTPN20-203ENST00000374342 LRRC7Q96NW7 1537 aa22.23■■□□□ 1.15
PTPN20-203ENST00000374342 TCP11L2Q8N4U5 519 aa22.22■■□□□ 1.15
PTPN20-203ENST00000374342 RRP7AQ9Y3A4 280 aaKnown RBP22.22■■□□□ 1.15
PTPN20-203ENST00000374342 EMILIN1Q9Y6C2 1016 aa22.22■■□□□ 1.15
PTPN20-203ENST00000374342 SSH2Q76I76 1423 aa22.22■■□□□ 1.15
PTPN20-203ENST00000374342 RRP1P56182 461 aaKnown RBP22.21■■□□□ 1.15
PTPN20-203ENST00000374342 DUSP27Q5VZP5 1158 aa22.21■■□□□ 1.15
PTPN20-203ENST00000374342 PELP1Q8IZL8 1130 aaKnown RBP22.21■■□□□ 1.15
PTPN20-203ENST00000374342 NEUROD2Q15784 382 aa22.21■■□□□ 1.15
PTPN20-203ENST00000374342 NGDNQ8NEJ9 315 aaKnown RBP22.21■■□□□ 1.15
PTPN20-203ENST00000374342 RBM33Q96EV2 1170 aaKnown RBP22.21■■□□□ 1.15
PTPN20-203ENST00000374342 SLFN5Q08AF3 891 aa22.2■■□□□ 1.14
PTPN20-203ENST00000374342 PPP4R2Q9NY27 417 aa22.18■■□□□ 1.14
PTPN20-203ENST00000374342 TTC21AQ8NDW8 1320 aa22.18■■□□□ 1.14
PTPN20-203ENST00000374342 RRS1Q15050 365 aaKnown RBP22.18■■□□□ 1.14
PTPN20-203ENST00000374342 WWC1Q8IX03 1113 aa22.18■■□□□ 1.14
PTPN20-203ENST00000374342 DMRT2Q9Y5R5 561 aa22.18■■□□□ 1.14
PTPN20-203ENST00000374342 PEAK1Q9H792 1746 aa22.17■■□□□ 1.14
PTPN20-203ENST00000374342 MARF1Q9Y4F3 1742 aaKnown RBP22.17■■□□□ 1.14
PTPN20-203ENST00000374342 SPINK5Q9NQ38 1064 aaPredicted RBP22.17■■□□□ 1.14
PTPN20-203ENST00000374342 MAPK8IP3Q9UPT6 1336 aa22.16■■□□□ 1.14
PTPN20-203ENST00000374342 USP54Q70EL1 1684 aa22.16■■□□□ 1.14
PTPN20-203ENST00000374342 E9PSI1 815 aa22.16■■□□□ 1.14
PTPN20-203ENST00000374342 C14orf37Q86TY3 774 aa22.14■■□□□ 1.14
PTPN20-203ENST00000374342 TRMT2AQ8IZ69 625 aaKnown RBP22.14■■□□□ 1.14
PTPN20-203ENST00000374342 PLEKHF1Q96S99 279 aa22.14■■□□□ 1.14
PTPN20-203ENST00000374342 STRCP1A6NGW2 1772 aa22.13■■□□□ 1.13
PTPN20-203ENST00000374342 USP31Q70CQ4 1352 aa22.13■■□□□ 1.13
PTPN20-203ENST00000374342 PHF23Q9BUL5 403 aaPredicted RBP22.12■■□□□ 1.13
PTPN20-203ENST00000374342 CCDC27Q2M243 656 aa22.12■■□□□ 1.13
PTPN20-203ENST00000374342 PNNQ9H307 717 aaKnown RBP22.1■■□□□ 1.13
PTPN20-203ENST00000374342 PHF8Q9UPP1 1060 aa22.1■■□□□ 1.13
PTPN20-203ENST00000374342 SOX12O15370 315 aa22.09■■□□□ 1.13
PTPN20-203ENST00000374342 IL13P35225 146 aa22.09■■□□□ 1.13
PTPN20-203ENST00000374342 NCBP3Q53F19 620 aaKnown RBP22.08■■□□□ 1.13
PTPN20-203ENST00000374342 WDR63Q8IWG1 891 aa22.08■■□□□ 1.13
PTPN20-203ENST00000374342 RSPH6AQ9H0K4 717 aa22.08■■□□□ 1.13
PTPN20-203ENST00000374342 FCHSD2O94868 740 aa22.08■■□□□ 1.12
PTPN20-203ENST00000374342 PRKAR2BP31323 418 aa22.08■■□□□ 1.12
PTPN20-203ENST00000374342 TMPOP42166 694 aaKnown RBP22.08■■□□□ 1.12
PTPN20-203ENST00000374342 HMOX1P09601 288 aa22.07■■□□□ 1.12
PTPN20-203ENST00000374342 RGPD1P0DJD0 1748 aa22.07■■□□□ 1.12
PTPN20-203ENST00000374342 HSPA2P54652 639 aa22.07■■□□□ 1.12
PTPN20-203ENST00000374342 B4GALNT3Q6L9W6 998 aa22.07■■□□□ 1.12
PTPN20-203ENST00000374342 PROSER2Q86WR7 435 aaPredicted RBP22.07■■□□□ 1.12
PTPN20-203ENST00000374342 PLIN1O60240 522 aa22.06■■□□□ 1.12
PTPN20-203ENST00000374342 DLG5Q8TDM6 1919 aa22.06■■□□□ 1.12
PTPN20-203ENST00000374342 KIF1AQ12756 1690 aa22.05■■□□□ 1.12
PTPN20-203ENST00000374342 NEFMP07197 916 aa22.04■■□□□ 1.12
PTPN20-203ENST00000374342 ESCO1Q5FWF5 840 aa22.04■■□□□ 1.12
PTPN20-203ENST00000374342 LTN1O94822 1766 aa22.04■■□□□ 1.12
PTPN20-203ENST00000374342 LMTK3Q96Q04 1460 aa22.04■■□□□ 1.12
PTPN20-203ENST00000374342 PAK3O75914 559 aaPredicted RBP22.04■■□□□ 1.12
PTPN20-203ENST00000374342 KDM4FA0A1W2PPD8 638 aa22.03■■□□□ 1.12
PTPN20-203ENST00000374342 STRCQ7RTU9 1775 aa22.02■■□□□ 1.12
PTPN20-203ENST00000374342 NLRP6P59044 892 aa22.02■■□□□ 1.12
PTPN20-203ENST00000374342 NUTM2GQ5VZR2 741 aa22.02■■□□□ 1.12
PTPN20-203ENST00000374342 MAP3K19Q56UN5 1328 aa22.02■■□□□ 1.12
PTPN20-203ENST00000374342 RIPK4P57078 832 aa22.02■■□□□ 1.11
PTPN20-203ENST00000374342 EXOC6Q8TAG9 804 aa22.02■■□□□ 1.11
PTPN20-203ENST00000374342 TRIM35Q9UPQ4 493 aa22.02■■□□□ 1.11
PTPN20-203ENST00000374342 SBNO1A3KN83 1393 aa22.01■■□□□ 1.11
PTPN20-203ENST00000374342 EIF4A2Q14240 407 aaKnown RBP22.01■■□□□ 1.11
PTPN20-203ENST00000374342 FLT4P35916 1363 aa22.01■■□□□ 1.11
PTPN20-203ENST00000374342 ABTB2Q8N961 1025 aa22■■□□□ 1.11
PTPN20-203ENST00000374342 MYH16Q9H6N6 1097 aa22■■□□□ 1.11
PTPN20-203ENST00000374342 TRPM3Q9HCF6 1732 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms