RNA–Protein interactions for RNA: ENST00000374014.3

LINC00474-201, long intergenic non-protein coding RNA 474, humanhuman

TSL 1 (best) BASIC

Gene LINC00474, Length 769 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474-201ENST00000374014 TTLL12Q14166 644 aaPredicted RBP9.54□□□□□ -0.88
LINC00474-201ENST00000374014 H3BM21 787 aa9.53□□□□□ -0.88
LINC00474-201ENST00000374014 NNTQ13423 1086 aa9.53□□□□□ -0.88
LINC00474-201ENST00000374014 LORP23490 312 aaPredicted RBP9.52□□□□□ -0.89
LINC00474-201ENST00000374014 AMHR2Q16671 573 aa9.52□□□□□ -0.89
LINC00474-201ENST00000374014 BARGINQ6ZT62 677 aa9.52□□□□□ -0.89
LINC00474-201ENST00000374014 ZSCAN1Q8NBB4 408 aa9.52□□□□□ -0.89
LINC00474-201ENST00000374014 MRPL14Q6P1L8 145 aaKnown RBP9.51□□□□□ -0.89
LINC00474-201ENST00000374014 GIGYF2Q6Y7W6 1299 aaKnown RBP9.51□□□□□ -0.89
LINC00474-201ENST00000374014 BEGAINQ9BUH8 593 aa9.51□□□□□ -0.89
LINC00474-201ENST00000374014 ERBB4Q15303 1308 aa9.51□□□□□ -0.89
LINC00474-201ENST00000374014 GJA5P36382 358 aa9.5□□□□□ -0.89
LINC00474-201ENST00000374014 ZMYND10O75800 440 aa9.49□□□□□ -0.89
LINC00474-201ENST00000374014 ADH1CP00326 375 aa9.49□□□□□ -0.89
LINC00474-201ENST00000374014 TIMP2P16035 220 aa9.49□□□□□ -0.89
LINC00474-201ENST00000374014 CTHP32929 405 aa9.49□□□□□ -0.89
LINC00474-201ENST00000374014 WDR4P57081 412 aaKnown RBP9.49□□□□□ -0.89
LINC00474-201ENST00000374014 SCARF1Q14162 830 aa9.49□□□□□ -0.89
LINC00474-201ENST00000374014 LYPD8Q6UX82 237 aa9.49□□□□□ -0.89
LINC00474-201ENST00000374014 FAM174AQ8TBP5 190 aa9.48□□□□□ -0.89
LINC00474-201ENST00000374014 PURBQ96QR8 312 aaKnown RBP9.48□□□□□ -0.89
LINC00474-201ENST00000374014 KLF16Q9BXK1 252 aaPredicted RBP9.48□□□□□ -0.89
LINC00474-201ENST00000374014 TBC1D2Q9BYX2 928 aa9.48□□□□□ -0.89
LINC00474-201ENST00000374014 DIXDC1Q155Q3 683 aa9.47□□□□□ -0.89
LINC00474-201ENST00000374014 RSBN1LQ6PCB5 846 aaPredicted RBP9.47□□□□□ -0.89
LINC00474-201ENST00000374014 PCDHB15Q9Y5E8 787 aa9.47□□□□□ -0.89
LINC00474-201ENST00000374014 CFAP99D6REC4 459 aa9.46□□□□□ -0.9
LINC00474-201ENST00000374014 CDK15Q96Q40 435 aa9.46□□□□□ -0.9
LINC00474-201ENST00000374014 FOXJ1Q92949 421 aa9.45□□□□□ -0.9
LINC00474-201ENST00000374014 SOBPA7XYQ1 873 aa9.44□□□□□ -0.9
LINC00474-201ENST00000374014 SPTLC1O15269 473 aa9.44□□□□□ -0.9
LINC00474-201ENST00000374014 ARID5BQ14865 1188 aa9.44□□□□□ -0.9
LINC00474-201ENST00000374014 ZC3H15Q8WU90 426 aaKnown RBP9.44□□□□□ -0.9
LINC00474-201ENST00000374014 MAP10Q9P2G4 905 aa9.44□□□□□ -0.9
LINC00474-201ENST00000374014 F12P00748 615 aaPredicted RBP9.43□□□□□ -0.9
LINC00474-201ENST00000374014 HRCP23327 699 aa9.43□□□□□ -0.9
LINC00474-201ENST00000374014 ZBTB3Q9H5J0 574 aa9.43□□□□□ -0.9
LINC00474-201ENST00000374014 ZCCHC6Q5VYS8 1495 aaKnown RBP9.42□□□□□ -0.9
LINC00474-201ENST00000374014 PARP9Q8IXQ6 854 aa9.42□□□□□ -0.9
LINC00474-201ENST00000374014 ZIC2O95409 532 aaPredicted RBP9.41□□□□□ -0.9
LINC00474-201ENST00000374014 PRPF38BQ5VTL8 546 aaKnown RBP9.41□□□□□ -0.9
LINC00474-201ENST00000374014 ZFAND3Q9H8U3 227 aa9.41□□□□□ -0.9
LINC00474-201ENST00000374014 NR3C2P08235 984 aa9.4□□□□□ -0.9
LINC00474-201ENST00000374014 VSIG8P0DPA2 414 aa9.4□□□□□ -0.9
LINC00474-201ENST00000374014 GRM5P41594 1212 aa9.4□□□□□ -0.9
LINC00474-201ENST00000374014 NR5A1Q13285 461 aa9.4□□□□□ -0.9
LINC00474-201ENST00000374014 AGERQ15109 404 aa9.4□□□□□ -0.9
LINC00474-201ENST00000374014 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.9
LINC00474-201ENST00000374014 RIC3Q7Z5B4 369 aa9.4□□□□□ -0.9
LINC00474-201ENST00000374014 ITPKCQ96DU7 683 aa9.4□□□□□ -0.9
LINC00474-201ENST00000374014 BPHLQ86WA6 291 aaPredicted RBP9.39□□□□□ -0.91
LINC00474-201ENST00000374014 MAN1A2O60476 641 aa9.38□□□□□ -0.91
LINC00474-201ENST00000374014 C6orf118Q5T5N4 469 aa9.38□□□□□ -0.91
LINC00474-201ENST00000374014 CABLES1Q8TDN4 633 aa9.38□□□□□ -0.91
LINC00474-201ENST00000374014 TRIM66O15016 1216 aa9.37□□□□□ -0.91
LINC00474-201ENST00000374014 PER1O15534 1290 aaPredicted RBP9.37□□□□□ -0.91
LINC00474-201ENST00000374014 CSPP1Q1MSJ5 1256 aa9.36□□□□□ -0.91
LINC00474-201ENST00000374014 PPFIA3O75145 1194 aa9.34□□□□□ -0.91
LINC00474-201ENST00000374014 UPP2O95045 317 aa9.34□□□□□ -0.91
LINC00474-201ENST00000374014 BMP2P12643 396 aa9.34□□□□□ -0.91
LINC00474-201ENST00000374014 LINC00528Q8N1L1 170 aa9.34□□□□□ -0.91
LINC00474-201ENST00000374014 ARMC2Q8NEN0 867 aa9.34□□□□□ -0.91
LINC00474-201ENST00000374014 DCAF1Q9Y4B6 1507 aa9.33□□□□□ -0.92
LINC00474-201ENST00000374014 MEIOBQ8N635 442 aa9.33□□□□□ -0.92
LINC00474-201ENST00000374014 TSC1Q92574 1164 aa9.33□□□□□ -0.92
LINC00474-201ENST00000374014 NUTM2BA6NNL0 878 aaPredicted RBP9.32□□□□□ -0.92
LINC00474-201ENST00000374014 NUTM2EB1AL46 878 aaPredicted RBP9.32□□□□□ -0.92
LINC00474-201ENST00000374014 QPCTQ16769 361 aa9.32□□□□□ -0.92
LINC00474-201ENST00000374014 NUTM2DQ5VT03 806 aaPredicted RBP9.32□□□□□ -0.92
LINC00474-201ENST00000374014 SH3RF1Q7Z6J0 888 aa9.32□□□□□ -0.92
LINC00474-201ENST00000374014 NUTM2AQ8IVF1 878 aaPredicted RBP9.32□□□□□ -0.92
LINC00474-201ENST00000374014 AK7Q96M32 723 aa9.32□□□□□ -0.92
LINC00474-201ENST00000374014 C1QTNF2Q9BXJ5 285 aa9.32□□□□□ -0.92
LINC00474-201ENST00000374014 LIMD1Q9UGP4 676 aa9.32□□□□□ -0.92
LINC00474-201ENST00000374014 TUSC1Q2TAM9 212 aa9.31□□□□□ -0.92
LINC00474-201ENST00000374014 MAP4K5Q9Y4K4 846 aa9.31□□□□□ -0.92
LINC00474-201ENST00000374014 SOS2Q07890 1332 aaPredicted RBP9.31□□□□□ -0.92
LINC00474-201ENST00000374014 LILRB3O75022 631 aa9.3□□□□□ -0.92
LINC00474-201ENST00000374014 FSHRP23945 695 aa9.3□□□□□ -0.92
LINC00474-201ENST00000374014 MYSM1Q5VVJ2 828 aa9.3□□□□□ -0.92
LINC00474-201ENST00000374014 DNMT3LQ9UJW3 386 aa9.3□□□□□ -0.92
LINC00474-201ENST00000374014 NBPF14Q5TI25 921 aa9.29□□□□□ -0.92
LINC00474-201ENST00000374014 VASH1Q7L8A9 365 aaPredicted RBP9.29□□□□□ -0.92
LINC00474-201ENST00000374014 SH3BP5LQ7L8J4 393 aa9.29□□□□□ -0.92
LINC00474-201ENST00000374014 TRMT44Q8IYL2 757 aaKnown RBP9.29□□□□□ -0.92
LINC00474-201ENST00000374014 TSEN34Q9BSV6 310 aaKnown RBP9.29□□□□□ -0.92
LINC00474-201ENST00000374014 EMILIN1Q9Y6C2 1016 aa9.28□□□□□ -0.92
LINC00474-201ENST00000374014 MAGEB6P1A0A0J9YX57 407 aa9.27□□□□□ -0.93
LINC00474-201ENST00000374014 HELBQ8NG08 1087 aaPredicted RBP9.27□□□□□ -0.93
LINC00474-201ENST00000374014 CCDC116Q8IYX3 515 aa9.26□□□□□ -0.93
LINC00474-201ENST00000374014 PDE4DQ08499 809 aa9.25□□□□□ -0.93
LINC00474-201ENST00000374014 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.25□□□□□ -0.93
LINC00474-201ENST00000374014 RTL5Q5HYW3 569 aaPredicted RBP9.25□□□□□ -0.93
LINC00474-201ENST00000374014 KCNMA1Q12791 1236 aa9.24□□□□□ -0.93
LINC00474-201ENST00000374014 TTLL8A6PVC2 850 aa9.23□□□□□ -0.93
LINC00474-201ENST00000374014 GPR161Q8N6U8 529 aaKnown RBP9.23□□□□□ -0.93
LINC00474-201ENST00000374014 GPKOWQ92917 476 aaPredicted RBP eCLIP9.23□□□□□ -0.93
LINC00474-201ENST00000374014 CARD14Q9BXL6 1004 aa9.23□□□□□ -0.93
LINC00474-201ENST00000374014 GSK3AP49840 483 aa9.22□□□□□ -0.93
LINC00474-201ENST00000374014 KRT76Q01546 638 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms