RNA–Protein interactions for RNA: ENST00000373485.5

RBBP4-201, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-201ENST00000373485 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
RBBP4-201ENST00000373485 RGPD8O14715 1765 aaPredicted RBP12.92□□□□□ -0.34
RBBP4-201ENST00000373485 ZEB1P37275 1124 aaPredicted RBP12.92□□□□□ -0.34
RBBP4-201ENST00000373485 DDX17Q92841 729 aaKnown RBP12.92□□□□□ -0.34
RBBP4-201ENST00000373485 SBNO2Q9Y2G9 1366 aa12.92□□□□□ -0.34
RBBP4-201ENST00000373485 PMFBP1Q8TBY8 1022 aa12.91□□□□□ -0.34
RBBP4-201ENST00000373485 USP32Q8NFA0 1604 aa12.91□□□□□ -0.34
RBBP4-201ENST00000373485 ANKARQ7Z5J8 1434 aa12.9□□□□□ -0.34
RBBP4-201ENST00000373485 HSPA1LP34931 641 aa12.9□□□□□ -0.34
RBBP4-201ENST00000373485 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.34
RBBP4-201ENST00000373485 FOXO3O43524 673 aa12.89□□□□□ -0.35
RBBP4-201ENST00000373485 ZBTB47Q9UFB7 747 aaPredicted RBP12.89□□□□□ -0.35
RBBP4-201ENST00000373485 ATP7BP35670 1465 aa12.89□□□□□ -0.35
RBBP4-201ENST00000373485 DISP3Q9P2K9 1392 aa12.88□□□□□ -0.35
RBBP4-201ENST00000373485 TMF1P82094 1093 aa12.88□□□□□ -0.35
RBBP4-201ENST00000373485 XPCQ01831 940 aaPredicted RBP12.88□□□□□ -0.35
RBBP4-201ENST00000373485 CCDC61Q9Y6R9 512 aa12.88□□□□□ -0.35
RBBP4-201ENST00000373485 SLC24A1O60721 1099 aa12.88□□□□□ -0.35
RBBP4-201ENST00000373485 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
RBBP4-201ENST00000373485 NGDNQ8NEJ9 315 aaKnown RBP12.87□□□□□ -0.35
RBBP4-201ENST00000373485 POLR3GLQ9BT43 218 aa12.87□□□□□ -0.35
RBBP4-201ENST00000373485 CABP1Q9NZU7 370 aa12.87□□□□□ -0.35
RBBP4-201ENST00000373485 PPIP5K1Q6PFW1 1433 aa12.86□□□□□ -0.35
RBBP4-201ENST00000373485 TMC1Q8TDI8 760 aa12.86□□□□□ -0.35
RBBP4-201ENST00000373485 PHLPP1O60346 1717 aa12.86□□□□□ -0.35
RBBP4-201ENST00000373485 ITSN1Q15811 1721 aa12.86□□□□□ -0.35
RBBP4-201ENST00000373485 NPHP3Q7Z494 1330 aa12.85□□□□□ -0.35
RBBP4-201ENST00000373485 KIF1AQ12756 1690 aa12.85□□□□□ -0.35
RBBP4-201ENST00000373485 ATAD2Q6PL18 1390 aa12.85□□□□□ -0.35
RBBP4-201ENST00000373485 PSME1Q06323 249 aa12.85□□□□□ -0.35
RBBP4-201ENST00000373485 NHSL1Q5SYE7 1610 aa12.85□□□□□ -0.35
RBBP4-201ENST00000373485 AHDC1Q5TGY3 1603 aaPredicted RBP12.85□□□□□ -0.35
RBBP4-201ENST00000373485 TOPAZ1Q8N9V7 1692 aa12.84□□□□□ -0.35
RBBP4-201ENST00000373485 PLEKHG3A1L390 1219 aa12.84□□□□□ -0.35
RBBP4-201ENST00000373485 KRT28Q7Z3Y7 464 aa12.84□□□□□ -0.35
RBBP4-201ENST00000373485 ACEP12821 1306 aa12.84□□□□□ -0.35
RBBP4-201ENST00000373485 CDCA8Q53HL2 280 aa12.83□□□□□ -0.36
RBBP4-201ENST00000373485 SLC12A5Q9H2X9 1139 aa12.83□□□□□ -0.36
RBBP4-201ENST00000373485 C11orf95C9JLR9 678 aaPredicted RBP12.82□□□□□ -0.36
RBBP4-201ENST00000373485 HAX1O00165 279 aa12.82□□□□□ -0.36
RBBP4-201ENST00000373485 PUS7Q96PZ0 661 aaKnown RBP12.82□□□□□ -0.36
RBBP4-201ENST00000373485 SOS2Q07890 1332 aaPredicted RBP12.82□□□□□ -0.36
RBBP4-201ENST00000373485 COL16A1Q07092 1604 aaPredicted RBP12.82□□□□□ -0.36
RBBP4-201ENST00000373485 LRRC59Q96AG4 307 aaKnown RBP12.81□□□□□ -0.36
RBBP4-201ENST00000373485 PXDNQ92626 1479 aa12.81□□□□□ -0.36
RBBP4-201ENST00000373485 PAK3O75914 559 aaPredicted RBP12.8□□□□□ -0.36
RBBP4-201ENST00000373485 LMOD2Q6P5Q4 547 aa12.8□□□□□ -0.36
RBBP4-201ENST00000373485 POLR3AO14802 1390 aaPredicted RBP12.8□□□□□ -0.36
RBBP4-201ENST00000373485 HDGFL2Q7Z4V5 671 aaPredicted RBP12.79□□□□□ -0.36
RBBP4-201ENST00000373485 SPATA31A3Q5VYP0 1347 aa12.78□□□□□ -0.36
RBBP4-201ENST00000373485 IFNLR1Q8IU57 520 aaPredicted RBP12.78□□□□□ -0.36
RBBP4-201ENST00000373485 TERF2IPQ9NYB0 399 aa12.78□□□□□ -0.36
RBBP4-201ENST00000373485 JCADQ9P266 1359 aa12.78□□□□□ -0.36
RBBP4-201ENST00000373485 SBNO1A3KN83 1393 aa12.77□□□□□ -0.37
RBBP4-201ENST00000373485 KTN1Q86UP2 1357 aaKnown RBP12.77□□□□□ -0.37
RBBP4-201ENST00000373485 KIF7Q2M1P5 1343 aa12.77□□□□□ -0.37
RBBP4-201ENST00000373485 CD163L1Q9NR16 1453 aa12.76□□□□□ -0.37
RBBP4-201ENST00000373485 USP6P35125 1406 aa12.76□□□□□ -0.37
RBBP4-201ENST00000373485 CPSF1Q10570 1443 aaKnown RBP12.76□□□□□ -0.37
RBBP4-201ENST00000373485 NINLQ9Y2I6 1382 aa12.76□□□□□ -0.37
RBBP4-201ENST00000373485 NUTM2GQ5VZR2 741 aa12.76□□□□□ -0.37
RBBP4-201ENST00000373485 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
RBBP4-201ENST00000373485 TNS3Q68CZ2 1445 aa12.75□□□□□ -0.37
RBBP4-201ENST00000373485 A0A1W2PP64 1363 aa12.75□□□□□ -0.37
RBBP4-201ENST00000373485 PNPLA6Q8IY17 1366 aa12.75□□□□□ -0.37
RBBP4-201ENST00000373485 NUTM2BA6NNL0 878 aaPredicted RBP12.75□□□□□ -0.37
RBBP4-201ENST00000373485 NUTM2EB1AL46 878 aaPredicted RBP12.75□□□□□ -0.37
RBBP4-201ENST00000373485 CD44P16070 742 aaKnown RBP12.75□□□□□ -0.37
RBBP4-201ENST00000373485 NUTM2AQ8IVF1 878 aaPredicted RBP12.75□□□□□ -0.37
RBBP4-201ENST00000373485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.75□□□□□ -0.37
RBBP4-201ENST00000373485 AKAP12Q02952 1782 aa12.74□□□□□ -0.37
RBBP4-201ENST00000373485 MYOM1P52179 1685 aa12.74□□□□□ -0.37
RBBP4-201ENST00000373485 WASHC2AQ641Q2 1341 aa12.74□□□□□ -0.37
RBBP4-201ENST00000373485 ABTB2Q8N961 1025 aa12.74□□□□□ -0.37
RBBP4-201ENST00000373485 ANKRD36BQ8N2N9 1353 aa12.74□□□□□ -0.37
RBBP4-201ENST00000373485 CCDC7Q96M83 1385 aa12.74□□□□□ -0.37
RBBP4-201ENST00000373485 TTC21BQ7Z4L5 1316 aa12.73□□□□□ -0.37
RBBP4-201ENST00000373485 NUBP1P53384 320 aa12.73□□□□□ -0.37
RBBP4-201ENST00000373485 CABLES1Q8TDN4 633 aa12.73□□□□□ -0.37
RBBP4-201ENST00000373485 SHPRHQ149N8 1683 aa12.73□□□□□ -0.37
RBBP4-201ENST00000373485 ARHGEF10O15013 1369 aa12.73□□□□□ -0.37
RBBP4-201ENST00000373485 SSH2Q76I76 1423 aa12.72□□□□□ -0.37
RBBP4-201ENST00000373485 BRD4O60885 1362 aaPredicted RBP12.72□□□□□ -0.37
RBBP4-201ENST00000373485 MON2Q7Z3U7 1717 aa12.72□□□□□ -0.37
RBBP4-201ENST00000373485 SPATA31A6Q5VVP1 1343 aa12.72□□□□□ -0.37
RBBP4-201ENST00000373485 ALS2Q96Q42 1657 aa12.72□□□□□ -0.37
RBBP4-201ENST00000373485 EVX2Q03828 476 aa12.71□□□□□ -0.37
RBBP4-201ENST00000373485 PANK3Q9H999 370 aa12.71□□□□□ -0.37
RBBP4-201ENST00000373485 HAP1P54257 671 aaPredicted RBP12.71□□□□□ -0.38
RBBP4-201ENST00000373485 NLRP6P59044 892 aa12.71□□□□□ -0.38
RBBP4-201ENST00000373485 NME9Q86XW9 330 aa12.71□□□□□ -0.38
RBBP4-201ENST00000373485 KLHL34Q8N239 644 aa12.71□□□□□ -0.38
RBBP4-201ENST00000373485 CARD14Q9BXL6 1004 aa12.71□□□□□ -0.38
RBBP4-201ENST00000373485 EDC4Q6P2E9 1401 aaKnown RBP12.7□□□□□ -0.38
RBBP4-201ENST00000373485 TTC21AQ8NDW8 1320 aa12.7□□□□□ -0.38
RBBP4-201ENST00000373485 NRKQ7Z2Y5 1582 aa12.7□□□□□ -0.38
RBBP4-201ENST00000373485 ADAMTS2O95450 1211 aa12.7□□□□□ -0.38
RBBP4-201ENST00000373485 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
RBBP4-201ENST00000373485 COL22A1Q8NFW1 1626 aaPredicted RBP12.69□□□□□ -0.38
RBBP4-201ENST00000373485 NSD3Q9BZ95 1437 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms