RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 LMOD2Q6P5Q4 547 aa25.48■■□□□ 1.67
PBX3-202ENST00000373482 HDGFL2Q7Z4V5 671 aaPredicted RBP25.48■■□□□ 1.67
PBX3-202ENST00000373482 SLC12A5Q9H2X9 1139 aa25.48■■□□□ 1.67
PBX3-202ENST00000373482 CPSF1Q10570 1443 aaKnown RBP25.47■■□□□ 1.67
PBX3-202ENST00000373482 KTN1Q86UP2 1357 aaKnown RBP25.47■■□□□ 1.67
PBX3-202ENST00000373482 POLR3GLQ9BT43 218 aa25.47■■□□□ 1.67
PBX3-202ENST00000373482 TERF2IPQ9NYB0 399 aa25.47■■□□□ 1.67
PBX3-202ENST00000373482 CD163L1Q9NR16 1453 aa25.46■■□□□ 1.67
PBX3-202ENST00000373482 CRYBG1Q9Y4K1 1723 aa25.45■■□□□ 1.66
PBX3-202ENST00000373482 MED1Q15648 1581 aaPredicted RBP25.44■■□□□ 1.66
PBX3-202ENST00000373482 PIK3C2AO00443 1686 aa25.42■■□□□ 1.66
PBX3-202ENST00000373482 A0A1W2PP64 1363 aa25.42■■□□□ 1.66
PBX3-202ENST00000373482 KIF20BQ96Q89 1820 aa25.42■■□□□ 1.66
PBX3-202ENST00000373482 PHRF1Q9P1Y6 1649 aaKnown RBP25.41■■□□□ 1.66
PBX3-202ENST00000373482 ANKRD36BQ8N2N9 1353 aa25.41■■□□□ 1.66
PBX3-202ENST00000373482 NUTM2BA6NNL0 878 aaPredicted RBP25.4■■□□□ 1.66
PBX3-202ENST00000373482 NUTM2EB1AL46 878 aaPredicted RBP25.4■■□□□ 1.66
PBX3-202ENST00000373482 NUTM2AQ8IVF1 878 aaPredicted RBP25.4■■□□□ 1.66
PBX3-202ENST00000373482 SSH2Q76I76 1423 aa25.39■■□□□ 1.66
PBX3-202ENST00000373482 ABTB2Q8N961 1025 aa25.39■■□□□ 1.66
PBX3-202ENST00000373482 TTC21AQ8NDW8 1320 aa25.38■■□□□ 1.65
PBX3-202ENST00000373482 EDC4Q6P2E9 1401 aaKnown RBP25.38■■□□□ 1.65
PBX3-202ENST00000373482 C11orf95C9JLR9 678 aaPredicted RBP25.38■■□□□ 1.65
PBX3-202ENST00000373482 LRP6O75581 1613 aa25.37■■□□□ 1.65
PBX3-202ENST00000373482 USP54Q70EL1 1684 aa25.37■■□□□ 1.65
PBX3-202ENST00000373482 TTC21BQ7Z4L5 1316 aa25.37■■□□□ 1.65
PBX3-202ENST00000373482 HAP1P54257 671 aaPredicted RBP25.36■■□□□ 1.65
PBX3-202ENST00000373482 MEX3CQ5U5Q3 659 aaKnown RBP25.36■■□□□ 1.65
PBX3-202ENST00000373482 KIF7Q2M1P5 1343 aa25.36■■□□□ 1.65
PBX3-202ENST00000373482 PLEKHG5O94827 1062 aa25.34■■□□□ 1.65
PBX3-202ENST00000373482 NLRP13Q86W25 1043 aa25.34■■□□□ 1.65
PBX3-202ENST00000373482 NUTM2GQ5VZR2 741 aa25.33■■□□□ 1.65
PBX3-202ENST00000373482 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.32■■□□□ 1.64
PBX3-202ENST00000373482 NLRP6P59044 892 aa25.31■■□□□ 1.64
PBX3-202ENST00000373482 CABLES1Q8TDN4 633 aa25.31■■□□□ 1.64
PBX3-202ENST00000373482 CCDC7Q96M83 1385 aa25.31■■□□□ 1.64
PBX3-202ENST00000373482 ADAMTS2O95450 1211 aa25.29■■□□□ 1.64
PBX3-202ENST00000373482 ANKRD26Q9UPS8 1709 aa25.29■■□□□ 1.64
PBX3-202ENST00000373482 PLCH1Q4KWH8 1693 aa25.28■■□□□ 1.64
PBX3-202ENST00000373482 PHF23Q9BUL5 403 aaPredicted RBP25.27■■□□□ 1.64
PBX3-202ENST00000373482 WASHC2AQ641Q2 1341 aa25.27■■□□□ 1.64
PBX3-202ENST00000373482 SLIT3O75094 1523 aa25.27■■□□□ 1.64
PBX3-202ENST00000373482 LTN1O94822 1766 aa25.26■■□□□ 1.63
PBX3-202ENST00000373482 COL14A1Q05707 1796 aaKnown RBP25.26■■□□□ 1.63
PBX3-202ENST00000373482 USP19O94966 1318 aa25.26■■□□□ 1.63
PBX3-202ENST00000373482 NSD3Q9BZ95 1437 aa25.26■■□□□ 1.63
PBX3-202ENST00000373482 NWD2Q9ULI1 1742 aa25.26■■□□□ 1.63
PBX3-202ENST00000373482 NME9Q86XW9 330 aa25.25■■□□□ 1.63
PBX3-202ENST00000373482 USP31Q70CQ4 1352 aa25.24■■□□□ 1.63
PBX3-202ENST00000373482 C8orf37Q96NL8 207 aa25.24■■□□□ 1.63
PBX3-202ENST00000373482 PANK3Q9H999 370 aa25.24■■□□□ 1.63
PBX3-202ENST00000373482 CARD14Q9BXL6 1004 aa25.23■■□□□ 1.63
PBX3-202ENST00000373482 NGLY1Q96IV0 654 aa25.22■■□□□ 1.63
PBX3-202ENST00000373482 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.22■■□□□ 1.63
PBX3-202ENST00000373482 KCNH5Q8NCM2 988 aa25.21■■□□□ 1.63
PBX3-202ENST00000373482 RGPD5Q99666 1765 aa25.21■■□□□ 1.63
PBX3-202ENST00000373482 GCP02774 474 aa25.2■■□□□ 1.62
PBX3-202ENST00000373482 OVOS2A0A0J9YW53 1432 aa25.2■■□□□ 1.62
PBX3-202ENST00000373482 OVOS2Q6IE36 1432 aa25.2■■□□□ 1.62
PBX3-202ENST00000373482 CGNL1Q0VF96 1302 aa25.19■■□□□ 1.62
PBX3-202ENST00000373482 COG3Q96JB2 828 aa25.19■■□□□ 1.62
PBX3-202ENST00000373482 ZRANB1Q9UGI0 708 aa25.19■■□□□ 1.62
PBX3-202ENST00000373482 MAP2P11137 1827 aaKnown RBP25.19■■□□□ 1.62
PBX3-202ENST00000373482 AFF2P51816 1311 aa25.17■■□□□ 1.62
PBX3-202ENST00000373482 FYB1O15117 783 aa25.17■■□□□ 1.62
PBX3-202ENST00000373482 ZC3H6P61129 1189 aaKnown RBP25.17■■□□□ 1.62
PBX3-202ENST00000373482 NFAT5O94916 1531 aa25.17■■□□□ 1.62
PBX3-202ENST00000373482 NRAPQ86VF7 1730 aa25.16■■□□□ 1.62
PBX3-202ENST00000373482 PRDM11Q9NQV5 511 aa25.16■■□□□ 1.62
PBX3-202ENST00000373482 KIAA0232Q92628 1395 aa25.16■■□□□ 1.62
PBX3-202ENST00000373482 GGNBP2Q9H3C7 697 aa25.15■■□□□ 1.62
PBX3-202ENST00000373482 KNSTRNQ9Y448 316 aa25.15■■□□□ 1.62
PBX3-202ENST00000373482 CPDO75976 1380 aa25.15■■□□□ 1.62
PBX3-202ENST00000373482 COL18A1P39060 1754 aa25.14■■□□□ 1.62
PBX3-202ENST00000373482 SOX12O15370 315 aa25.14■■□□□ 1.62
PBX3-202ENST00000373482 ZNF772Q68DY9 489 aaPredicted RBP25.14■■□□□ 1.62
PBX3-202ENST00000373482 LMO7Q8WWI1 1683 aa25.13■■□□□ 1.61
PBX3-202ENST00000373482 SLIT2O94813 1529 aa25.13■■□□□ 1.61
PBX3-202ENST00000373482 FAM83GA6ND36 823 aa25.13■■□□□ 1.61
PBX3-202ENST00000373482 FNBP4Q8N3X1 1017 aaPredicted RBP25.12■■□□□ 1.61
PBX3-202ENST00000373482 USP21Q9UK80 565 aa25.12■■□□□ 1.61
PBX3-202ENST00000373482 NSD2O96028 1365 aa25.11■■□□□ 1.61
PBX3-202ENST00000373482 ZBTB7CA1YPR0 619 aa25.1■■□□□ 1.61
PBX3-202ENST00000373482 ABCC6O95255 1503 aa25.09■■□□□ 1.61
PBX3-202ENST00000373482 CHRNA2Q15822 529 aa25.09■■□□□ 1.61
PBX3-202ENST00000373482 BCL9LQ86UU0 1499 aa25.08■■□□□ 1.6
PBX3-202ENST00000373482 BTG4Q9NY30 223 aa25.07■■□□□ 1.6
PBX3-202ENST00000373482 RGS17Q9UGC6 210 aaPredicted RBP25.07■■□□□ 1.6
PBX3-202ENST00000373482 ARHGEF25Q86VW2 580 aa25.06■■□□□ 1.6
PBX3-202ENST00000373482 UNC5CLQ8IV45 518 aa25.06■■□□□ 1.6
PBX3-202ENST00000373482 AATKQ6ZMQ8 1374 aa25.05■■□□□ 1.6
PBX3-202ENST00000373482 PER1O15534 1290 aaPredicted RBP25.05■■□□□ 1.6
PBX3-202ENST00000373482 CAMTA1Q9Y6Y1 1673 aa25.04■■□□□ 1.6
PBX3-202ENST00000373482 TRPC5Q9UL62 973 aaPredicted RBP25.04■■□□□ 1.6
PBX3-202ENST00000373482 QTRT2Q9H974 415 aaKnown RBP25.03■■□□□ 1.6
PBX3-202ENST00000373482 FAM208AQ9UK61 1670 aaKnown RBP25.01■■□□□ 1.59
PBX3-202ENST00000373482 ZNF316A6NFI3 1004 aaPredicted RBP25.01■■□□□ 1.59
PBX3-202ENST00000373482 AMER1Q5JTC6 1135 aaPredicted RBP25.01■■□□□ 1.59
PBX3-202ENST00000373482 ATRNO75882 1429 aa25.01■■□□□ 1.59
PBX3-202ENST00000373482 EVA1CP58658 441 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms