RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 CAVIN1Q6NZI2 390 aaKnown RBP17.06■□□□□ 0.32
LMX1B-202ENST00000373474 NFXL1Q6ZNB6 911 aa17.06■□□□□ 0.32
LMX1B-202ENST00000373474 RIC3Q7Z5B4 369 aa17.06■□□□□ 0.32
LMX1B-202ENST00000373474 TSR2Q969E8 191 aaKnown RBP17.06■□□□□ 0.32
LMX1B-202ENST00000373474 MVPQ14764 893 aaKnown RBP17.06■□□□□ 0.32
LMX1B-202ENST00000373474 TSPY26PQ9H489 355 aa17.06■□□□□ 0.32
LMX1B-202ENST00000373474 BRPF3Q9ULD4 1205 aa17.06■□□□□ 0.32
LMX1B-202ENST00000373474 VPS53Q5VIR6 699 aa17.05■□□□□ 0.32
LMX1B-202ENST00000373474 AFAP1Q8N556 730 aa17.05■□□□□ 0.32
LMX1B-202ENST00000373474 GAS2L2Q8NHY3 880 aa17.05■□□□□ 0.32
LMX1B-202ENST00000373474 AMOTL1Q8IY63 956 aa17.05■□□□□ 0.32
LMX1B-202ENST00000373474 C1orf115Q9H7X2 142 aa17.05■□□□□ 0.32
LMX1B-202ENST00000373474 MAP3K1Q13233 1512 aa17.05■□□□□ 0.32
LMX1B-202ENST00000373474 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
LMX1B-202ENST00000373474 LEKR1Q6ZMV7 388 aa17.05■□□□□ 0.32
LMX1B-202ENST00000373474 PCMTD1Q96MG8 357 aaPredicted RBP17.04■□□□□ 0.32
LMX1B-202ENST00000373474 EPRSP07814 1512 aaKnown RBP17.04■□□□□ 0.32
LMX1B-202ENST00000373474 CWC22Q9HCG8 908 aaKnown RBP17.04■□□□□ 0.32
LMX1B-202ENST00000373474 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.04■□□□□ 0.32
LMX1B-202ENST00000373474 FOSBP53539 338 aa17.04■□□□□ 0.32
LMX1B-202ENST00000373474 NAT10Q9H0A0 1025 aaKnown RBP17.04■□□□□ 0.32
LMX1B-202ENST00000373474 ERICH2A1L162 156 aa17.03■□□□□ 0.32
LMX1B-202ENST00000373474 CDK13Q14004 1512 aaKnown RBP17.03■□□□□ 0.32
LMX1B-202ENST00000373474 PRPF40AO75400 957 aaKnown RBP17.03■□□□□ 0.32
LMX1B-202ENST00000373474 NEK4P51957 841 aa17.03■□□□□ 0.32
LMX1B-202ENST00000373474 NOL10Q9BSC4 688 aaKnown RBP17.02■□□□□ 0.32
LMX1B-202ENST00000373474 NESP48681 1621 aa17.02■□□□□ 0.32
LMX1B-202ENST00000373474 CUL7Q14999 1698 aa17.02■□□□□ 0.32
LMX1B-202ENST00000373474 CCP110O43303 1012 aa17.02■□□□□ 0.32
LMX1B-202ENST00000373474 GNAI2P04899 355 aa17.02■□□□□ 0.32
LMX1B-202ENST00000373474 FBXW7Q969H0 707 aa17.02■□□□□ 0.32
LMX1B-202ENST00000373474 HIP1O00291 1037 aa17.02■□□□□ 0.31
LMX1B-202ENST00000373474 TAF3Q5VWG9 929 aa17.02■□□□□ 0.31
LMX1B-202ENST00000373474 K7ELQ4 463 aaPredicted RBP17.02■□□□□ 0.31
LMX1B-202ENST00000373474 PRAM1Q96QH2 718 aa17.02■□□□□ 0.31
LMX1B-202ENST00000373474 ATF7IPQ6VMQ6 1270 aa17.01■□□□□ 0.31
LMX1B-202ENST00000373474 SLC12A5Q9H2X9 1139 aa17.01■□□□□ 0.31
LMX1B-202ENST00000373474 RNF214Q8ND24 703 aa17.01■□□□□ 0.31
LMX1B-202ENST00000373474 FSD1Q9BTV5 496 aa17.01■□□□□ 0.31
LMX1B-202ENST00000373474 CLASRPQ8N2M8 674 aaKnown RBP17.01■□□□□ 0.31
LMX1B-202ENST00000373474 SURF6O75683 361 aaKnown RBP17■□□□□ 0.31
LMX1B-202ENST00000373474 SLFN5Q08AF3 891 aa17■□□□□ 0.31
LMX1B-202ENST00000373474 AIMP1Q12904 312 aaKnown RBP17■□□□□ 0.31
LMX1B-202ENST00000373474 SAFBQ15424 915 aaKnown RBP eCLIP17■□□□□ 0.31
LMX1B-202ENST00000373474 SNAPC4Q5SXM2 1469 aa17■□□□□ 0.31
LMX1B-202ENST00000373474 RAPGEF4Q8WZA2 1011 aa17■□□□□ 0.31
LMX1B-202ENST00000373474 CCDC27Q2M243 656 aa17■□□□□ 0.31
LMX1B-202ENST00000373474 RALYLQ86SE5 291 aaKnown RBP17■□□□□ 0.31
LMX1B-202ENST00000373474 NEUROD6Q96NK8 337 aa17■□□□□ 0.31
LMX1B-202ENST00000373474 CHD1LQ86WJ1 897 aa17■□□□□ 0.31
LMX1B-202ENST00000373474 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
LMX1B-202ENST00000373474 ERC1Q8IUD2 1116 aa16.99■□□□□ 0.31
LMX1B-202ENST00000373474 CCT4P50991 539 aaKnown RBP16.99■□□□□ 0.31
LMX1B-202ENST00000373474 MYO6Q9UM54 1294 aa16.99■□□□□ 0.31
LMX1B-202ENST00000373474 OLFM4Q6UX06 510 aa16.98■□□□□ 0.31
LMX1B-202ENST00000373474 CDK19Q9BWU1 502 aa16.98■□□□□ 0.31
LMX1B-202ENST00000373474 USP8P40818 1118 aa16.98■□□□□ 0.31
LMX1B-202ENST00000373474 RRP9O43818 475 aaKnown RBP16.98■□□□□ 0.31
LMX1B-202ENST00000373474 NLRP6P59044 892 aa16.97■□□□□ 0.31
LMX1B-202ENST00000373474 WASHC4Q2M389 1173 aa16.97■□□□□ 0.31
LMX1B-202ENST00000373474 CAMSAP2Q08AD1 1489 aa16.97■□□□□ 0.31
LMX1B-202ENST00000373474 IQGAP2Q13576 1575 aa16.97■□□□□ 0.31
LMX1B-202ENST00000373474 FAM69CQ0P6D2 419 aa16.97■□□□□ 0.31
LMX1B-202ENST00000373474 VPS37DQ86XT2 251 aa16.97■□□□□ 0.31
LMX1B-202ENST00000373474 ANKRD30BQ9BXX2 1392 aa16.97■□□□□ 0.31
LMX1B-202ENST00000373474 DHX8Q14562 1220 aaKnown RBP16.96■□□□□ 0.31
LMX1B-202ENST00000373474 IL27Q8NEV9 243 aa16.96■□□□□ 0.31
LMX1B-202ENST00000373474 PDCP20941 246 aa16.96■□□□□ 0.31
LMX1B-202ENST00000373474 GRPEL1Q9HAV7 217 aa16.96■□□□□ 0.31
LMX1B-202ENST00000373474 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
LMX1B-202ENST00000373474 NUTM2GQ5VZR2 741 aa16.96■□□□□ 0.31
LMX1B-202ENST00000373474 LRRCC1Q9C099 1032 aa16.96■□□□□ 0.31
LMX1B-202ENST00000373474 CC2D2AQ9P2K1 1620 aa16.96■□□□□ 0.31
LMX1B-202ENST00000373474 CCDC141Q6ZP82 1450 aa16.96■□□□□ 0.3
LMX1B-202ENST00000373474 RPGRIP1LQ68CZ1 1315 aa16.96■□□□□ 0.3
LMX1B-202ENST00000373474 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
LMX1B-202ENST00000373474 CIZ1Q9ULV3 898 aaPredicted RBP16.95■□□□□ 0.3
LMX1B-202ENST00000373474 ZRSR2Q15696 482 aaKnown RBP16.95■□□□□ 0.3
LMX1B-202ENST00000373474 WWC1Q8IX03 1113 aa16.95■□□□□ 0.3
LMX1B-202ENST00000373474 TSPYL1Q9H0U9 437 aa16.94■□□□□ 0.3
LMX1B-202ENST00000373474 NSD3Q9BZ95 1437 aa16.94■□□□□ 0.3
LMX1B-202ENST00000373474 AEBP1Q8IUX7 1158 aa16.94■□□□□ 0.3
LMX1B-202ENST00000373474 TRIM5Q9C035 493 aa16.94■□□□□ 0.3
LMX1B-202ENST00000373474 PLEKHO1Q53GL0 409 aaPredicted RBP16.93■□□□□ 0.3
LMX1B-202ENST00000373474 SDF4Q9BRK5 362 aa16.93■□□□□ 0.3
LMX1B-202ENST00000373474 CABP1Q9NZU7 370 aa16.93■□□□□ 0.3
LMX1B-202ENST00000373474 ZNF692Q9BU19 519 aaPredicted RBP16.93■□□□□ 0.3
LMX1B-202ENST00000373474 NCOA1Q15788 1441 aa16.93■□□□□ 0.3
LMX1B-202ENST00000373474 WDR33Q9C0J8 1336 aaKnown RBP16.92■□□□□ 0.3
LMX1B-202ENST00000373474 CAGE1Q8TC20 777 aa16.92■□□□□ 0.3
LMX1B-202ENST00000373474 ZNF396Q96N95 335 aaPredicted RBP16.92■□□□□ 0.3
LMX1B-202ENST00000373474 BRMS1Q9HCU9 246 aa16.92■□□□□ 0.3
LMX1B-202ENST00000373474 ATAD2Q6PL18 1390 aa16.92■□□□□ 0.3
LMX1B-202ENST00000373474 HSP90AB3PQ58FF7 597 aa16.92■□□□□ 0.3
LMX1B-202ENST00000373474 DNAJC2Q99543 621 aaKnown RBP16.92■□□□□ 0.3
LMX1B-202ENST00000373474 ZNF428Q96B54 188 aa16.92■□□□□ 0.3
LMX1B-202ENST00000373474 SRCIN1Q9C0H9 1055 aa16.92■□□□□ 0.3
LMX1B-202ENST00000373474 NKTRP30414 1462 aaKnown RBP16.92■□□□□ 0.3
LMX1B-202ENST00000373474 KIAA0754O94854 1291 aa16.92■□□□□ 0.3
LMX1B-202ENST00000373474 ABCC5O15440 1437 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms