RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 YTHDC2Q9H6S0 1430 aaKnown RBP16.29■□□□□ 0.2
CTPS1-202ENST00000372621 PNPLA6Q8IY17 1366 aa16.29■□□□□ 0.2
CTPS1-202ENST00000372621 KIF20BQ96Q89 1820 aa16.28■□□□□ 0.2
CTPS1-202ENST00000372621 SRPK2P78362 688 aaKnown RBP16.28■□□□□ 0.2
CTPS1-202ENST00000372621 DZIP1LQ8IYY4 767 aaKnown RBP16.28■□□□□ 0.2
CTPS1-202ENST00000372621 IL16Q14005 1332 aa16.28■□□□□ 0.2
CTPS1-202ENST00000372621 STK26Q9P289 416 aa16.28■□□□□ 0.2
CTPS1-202ENST00000372621 TBC1D32Q96NH3 1257 aa16.27■□□□□ 0.2
CTPS1-202ENST00000372621 EXOSC9Q06265 439 aaKnown RBP16.27■□□□□ 0.19
CTPS1-202ENST00000372621 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
CTPS1-202ENST00000372621 TERF2IPQ9NYB0 399 aa16.26■□□□□ 0.19
CTPS1-202ENST00000372621 ALKQ9UM73 1620 aa16.26■□□□□ 0.19
CTPS1-202ENST00000372621 ARHGEF40Q8TER5 1519 aa16.26■□□□□ 0.19
CTPS1-202ENST00000372621 U2SURPO15042 1029 aaKnown RBP16.26■□□□□ 0.19
CTPS1-202ENST00000372621 TRIM27P14373 513 aa16.26■□□□□ 0.19
CTPS1-202ENST00000372621 PRAM1Q96QH2 718 aa16.26■□□□□ 0.19
CTPS1-202ENST00000372621 BECN1Q14457 450 aa16.25■□□□□ 0.19
CTPS1-202ENST00000372621 FTSJ3Q8IY81 847 aaKnown RBP16.25■□□□□ 0.19
CTPS1-202ENST00000372621 SSH1Q8WYL5 1049 aa16.25■□□□□ 0.19
CTPS1-202ENST00000372621 HDAC1Q13547 482 aaPredicted RBP16.24■□□□□ 0.19
CTPS1-202ENST00000372621 SMC4Q9NTJ3 1288 aa16.24■□□□□ 0.19
CTPS1-202ENST00000372621 MINK1Q8N4C8 1332 aaPredicted RBP16.24■□□□□ 0.19
CTPS1-202ENST00000372621 ANTXR1Q9H6X2 564 aa16.23■□□□□ 0.19
CTPS1-202ENST00000372621 ATF7IPQ6VMQ6 1270 aa16.23■□□□□ 0.19
CTPS1-202ENST00000372621 DDX19BQ9UMR2 479 aa16.22■□□□□ 0.19
CTPS1-202ENST00000372621 UPF2Q9HAU5 1272 aaKnown RBP16.22■□□□□ 0.19
CTPS1-202ENST00000372621 DIAPH1O60610 1272 aaKnown RBP16.21■□□□□ 0.19
CTPS1-202ENST00000372621 LRRC7Q96NW7 1537 aa16.21■□□□□ 0.19
CTPS1-202ENST00000372621 RIPK4P57078 832 aa16.21■□□□□ 0.19
CTPS1-202ENST00000372621 POGKQ9P215 609 aa16.21■□□□□ 0.18
CTPS1-202ENST00000372621 NOB1Q9ULX3 412 aaKnown RBP16.21■□□□□ 0.18
CTPS1-202ENST00000372621 CDK19Q9BWU1 502 aa16.2■□□□□ 0.18
CTPS1-202ENST00000372621 SETD1AO15047 1707 aaKnown RBP16.2■□□□□ 0.18
CTPS1-202ENST00000372621 DLC1Q96QB1 1528 aa16.2■□□□□ 0.18
CTPS1-202ENST00000372621 SENP3Q9H4L4 574 aaPredicted RBP16.2■□□□□ 0.18
CTPS1-202ENST00000372621 HDGFL2Q7Z4V5 671 aaPredicted RBP16.19■□□□□ 0.18
CTPS1-202ENST00000372621 SMC5Q8IY18 1101 aa16.19■□□□□ 0.18
CTPS1-202ENST00000372621 TBC1D2Q9BYX2 928 aa16.19■□□□□ 0.18
CTPS1-202ENST00000372621 PNNQ9H307 717 aaKnown RBP16.19■□□□□ 0.18
CTPS1-202ENST00000372621 ZBTB40Q9NUA8 1239 aa16.19■□□□□ 0.18
CTPS1-202ENST00000372621 FAM135BQ49AJ0 1406 aa16.19■□□□□ 0.18
CTPS1-202ENST00000372621 BRPF3Q9ULD4 1205 aa16.19■□□□□ 0.18
CTPS1-202ENST00000372621 FCHSD2O94868 740 aa16.18■□□□□ 0.18
CTPS1-202ENST00000372621 FBXO31Q5XUX0 539 aaPredicted RBP16.18■□□□□ 0.18
CTPS1-202ENST00000372621 ITPRIPQ8IWB1 547 aa16.18■□□□□ 0.18
CTPS1-202ENST00000372621 CABP1Q9NZU7 370 aa16.18■□□□□ 0.18
CTPS1-202ENST00000372621 PPIP5K1Q6PFW1 1433 aa16.18■□□□□ 0.18
CTPS1-202ENST00000372621 TMEM57Q8N5G2 664 aa16.18■□□□□ 0.18
CTPS1-202ENST00000372621 MAP2P11137 1827 aaKnown RBP16.18■□□□□ 0.18
CTPS1-202ENST00000372621 ATP7BP35670 1465 aa16.17■□□□□ 0.18
CTPS1-202ENST00000372621 ALDH1L2Q3SY69 923 aa16.17■□□□□ 0.18
CTPS1-202ENST00000372621 KIF16BQ96L93 1317 aa16.17■□□□□ 0.18
CTPS1-202ENST00000372621 RIMBP3CA6NJZ7 1639 aa16.17■□□□□ 0.18
CTPS1-202ENST00000372621 RIMBP3BA6NNM3 1639 aa16.17■□□□□ 0.18
CTPS1-202ENST00000372621 RIMBP3Q9UFD9 1639 aa16.17■□□□□ 0.18
CTPS1-202ENST00000372621 SLKQ9H2G2 1235 aaPredicted RBP16.17■□□□□ 0.18
CTPS1-202ENST00000372621 BRPF1P55201 1214 aaPredicted RBP16.16■□□□□ 0.18
CTPS1-202ENST00000372621 RSPH6AQ9H0K4 717 aa16.16■□□□□ 0.18
CTPS1-202ENST00000372621 POLKQ9UBT6 870 aa16.15■□□□□ 0.18
CTPS1-202ENST00000372621 REREQ9P2R6 1566 aa16.14■□□□□ 0.17
CTPS1-202ENST00000372621 IPO8O15397 1037 aaKnown RBP16.14■□□□□ 0.17
CTPS1-202ENST00000372621 A2ML1A8K2U0 1454 aa16.13■□□□□ 0.17
CTPS1-202ENST00000372621 ZNF428Q96B54 188 aa16.13■□□□□ 0.17
CTPS1-202ENST00000372621 C22orf23Q9BZE7 217 aa16.13■□□□□ 0.17
CTPS1-202ENST00000372621 RTN4Q9NQC3 1192 aaKnown RBP16.13■□□□□ 0.17
CTPS1-202ENST00000372621 PRKAR2BP31323 418 aa16.12■□□□□ 0.17
CTPS1-202ENST00000372621 SPATA31D1Q6ZQQ2 1576 aa16.12■□□□□ 0.17
CTPS1-202ENST00000372621 NUCB1Q02818 461 aa16.12■□□□□ 0.17
CTPS1-202ENST00000372621 CPSF1Q10570 1443 aaKnown RBP16.12■□□□□ 0.17
CTPS1-202ENST00000372621 AGLP35573 1532 aa16.11■□□□□ 0.17
CTPS1-202ENST00000372621 PIK3R4Q99570 1358 aa16.11■□□□□ 0.17
CTPS1-202ENST00000372621 FBLN1P23142 703 aa16.11■□□□□ 0.17
CTPS1-202ENST00000372621 NRXN3Q9Y4C0 1643 aa16.1■□□□□ 0.17
CTPS1-202ENST00000372621 WAPLQ7Z5K2 1190 aa16.1■□□□□ 0.17
CTPS1-202ENST00000372621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.1■□□□□ 0.17
CTPS1-202ENST00000372621 PHACTR3Q96KR7 559 aa16.1■□□□□ 0.17
CTPS1-202ENST00000372621 PTCH1Q13635 1447 aa16.09■□□□□ 0.17
CTPS1-202ENST00000372621 MFAP1P55081 439 aaKnown RBP16.09■□□□□ 0.17
CTPS1-202ENST00000372621 NFE2L2Q16236 605 aa16.09■□□□□ 0.17
CTPS1-202ENST00000372621 DLG5Q8TDM6 1919 aa16.09■□□□□ 0.17
CTPS1-202ENST00000372621 VAMP4O75379 141 aa16.09■□□□□ 0.17
CTPS1-202ENST00000372621 PPP6R1Q9UPN7 881 aa16.09■□□□□ 0.17
CTPS1-202ENST00000372621 CDK12Q9NYV4 1490 aaPredicted RBP16.09■□□□□ 0.17
CTPS1-202ENST00000372621 EDC4Q6P2E9 1401 aaKnown RBP16.08■□□□□ 0.17
CTPS1-202ENST00000372621 RIMS2Q9UQ26 1411 aa16.08■□□□□ 0.16
CTPS1-202ENST00000372621 IL13P35225 146 aa16.08■□□□□ 0.16
CTPS1-202ENST00000372621 ARHGAP45Q92619 1136 aa16.08■□□□□ 0.16
CTPS1-202ENST00000372621 ZBTB7BO15156 539 aaPredicted RBP16.07■□□□□ 0.16
CTPS1-202ENST00000372621 ZNF853P0CG23 659 aa16.07■□□□□ 0.16
CTPS1-202ENST00000372621 MRPL50Q8N5N7 158 aaKnown RBP16.07■□□□□ 0.16
CTPS1-202ENST00000372621 MON2Q7Z3U7 1717 aa16.07■□□□□ 0.16
CTPS1-202ENST00000372621 STAG3Q9UJ98 1225 aa16.07■□□□□ 0.16
CTPS1-202ENST00000372621 AATKQ6ZMQ8 1374 aa16.07■□□□□ 0.16
CTPS1-202ENST00000372621 CHD1LQ86WJ1 897 aa16.06■□□□□ 0.16
CTPS1-202ENST00000372621 RBM25P49756 843 aaKnown RBP16.06■□□□□ 0.16
CTPS1-202ENST00000372621 IFT57Q9NWB7 429 aa16.06■□□□□ 0.16
CTPS1-202ENST00000372621 HMOX1P09601 288 aa16.06■□□□□ 0.16
CTPS1-202ENST00000372621 EMILIN1Q9Y6C2 1016 aa16.06■□□□□ 0.16
CTPS1-202ENST00000372621 NCOA3Q9Y6Q9 1424 aa16.05■□□□□ 0.16
CTPS1-202ENST00000372621 CALD1Q05682 793 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms