RNA–Protein interactions for RNA: ENST00000372597.5

SCMH1-207, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SCMH1, Length 3,252 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-207ENST00000372597 HDAC1Q13547 482 aaPredicted RBP13.44□□□□□ -0.26
SCMH1-207ENST00000372597 QRICH2Q9H0J4 1663 aa13.44□□□□□ -0.26
SCMH1-207ENST00000372597 ANTXR1Q9H6X2 564 aa13.44□□□□□ -0.26
SCMH1-207ENST00000372597 ELL2O00472 640 aaPredicted RBP13.43□□□□□ -0.26
SCMH1-207ENST00000372597 GOLGA6L3A6NEY3 463 aa13.43□□□□□ -0.26
SCMH1-207ENST00000372597 NCBP3Q53F19 620 aaKnown RBP13.43□□□□□ -0.26
SCMH1-207ENST00000372597 CABP1Q9NZU7 370 aa13.43□□□□□ -0.26
SCMH1-207ENST00000372597 MCM4P33991 863 aa13.42□□□□□ -0.26
SCMH1-207ENST00000372597 PRKAR2BP31323 418 aa13.42□□□□□ -0.26
SCMH1-207ENST00000372597 ANKRD45Q5TZF3 282 aa13.42□□□□□ -0.26
SCMH1-207ENST00000372597 PLEKHF1Q96S99 279 aa13.42□□□□□ -0.26
SCMH1-207ENST00000372597 HSP90AB1P08238 724 aaKnown RBP13.42□□□□□ -0.26
SCMH1-207ENST00000372597 HMOX1P09601 288 aa13.42□□□□□ -0.26
SCMH1-207ENST00000372597 SLC52A1Q9NWF4 448 aa13.42□□□□□ -0.26
SCMH1-207ENST00000372597 KIDINS220Q9ULH0 1771 aa13.41□□□□□ -0.26
SCMH1-207ENST00000372597 LMTK2Q8IWU2 1503 aa13.41□□□□□ -0.26
SCMH1-207ENST00000372597 ZMYM3Q14202 1370 aa13.41□□□□□ -0.26
SCMH1-207ENST00000372597 ATAD2Q6PL18 1390 aa13.41□□□□□ -0.26
SCMH1-207ENST00000372597 ADGRB1O14514 1584 aa13.41□□□□□ -0.26
SCMH1-207ENST00000372597 MYO3AQ8NEV4 1616 aa13.41□□□□□ -0.26
SCMH1-207ENST00000372597 FBLN1P23142 703 aa13.41□□□□□ -0.26
SCMH1-207ENST00000372597 CDK19Q9BWU1 502 aa13.41□□□□□ -0.26
SCMH1-207ENST00000372597 ABCC11Q96J66 1382 aa13.41□□□□□ -0.26
SCMH1-207ENST00000372597 SHPRHQ149N8 1683 aa13.41□□□□□ -0.26
SCMH1-207ENST00000372597 SMC5Q8IY18 1101 aa13.4□□□□□ -0.26
SCMH1-207ENST00000372597 POGZQ7Z3K3 1410 aa13.4□□□□□ -0.26
SCMH1-207ENST00000372597 IL16Q14005 1332 aa13.4□□□□□ -0.26
SCMH1-207ENST00000372597 FAM43AQ8N2R8 423 aa13.4□□□□□ -0.26
SCMH1-207ENST00000372597 ZBTB40Q9NUA8 1239 aa13.4□□□□□ -0.26
SCMH1-207ENST00000372597 THUMPD2Q9BTF0 503 aaKnown RBP13.4□□□□□ -0.26
SCMH1-207ENST00000372597 C1orf115Q9H7X2 142 aa13.39□□□□□ -0.27
SCMH1-207ENST00000372597 NLRP1Q9C000 1473 aa13.39□□□□□ -0.27
SCMH1-207ENST00000372597 FCHSD2O94868 740 aa13.39□□□□□ -0.27
SCMH1-207ENST00000372597 CHD1LQ86WJ1 897 aa13.39□□□□□ -0.27
SCMH1-207ENST00000372597 CHMP4BQ9H444 224 aaKnown RBP13.39□□□□□ -0.27
SCMH1-207ENST00000372597 TRAK2O60296 914 aa13.38□□□□□ -0.27
SCMH1-207ENST00000372597 IFT172Q9UG01 1749 aa13.38□□□□□ -0.27
SCMH1-207ENST00000372597 TULP4Q9NRJ4 1543 aa13.38□□□□□ -0.27
SCMH1-207ENST00000372597 FOXD4L1Q9NU39 408 aa13.37□□□□□ -0.27
SCMH1-207ENST00000372597 GLI2P10070 1586 aa13.37□□□□□ -0.27
SCMH1-207ENST00000372597 CALD1Q05682 793 aaKnown RBP13.37□□□□□ -0.27
SCMH1-207ENST00000372597 ALDH1L2Q3SY69 923 aa13.37□□□□□ -0.27
SCMH1-207ENST00000372597 NUCB1Q02818 461 aa13.37□□□□□ -0.27
SCMH1-207ENST00000372597 ABCC3O15438 1527 aa13.36□□□□□ -0.27
SCMH1-207ENST00000372597 MLH3Q9UHC1 1453 aa13.36□□□□□ -0.27
SCMH1-207ENST00000372597 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
SCMH1-207ENST00000372597 DDX11L8A8MPP1 907 aa13.35□□□□□ -0.27
SCMH1-207ENST00000372597 FBXO31Q5XUX0 539 aaPredicted RBP13.35□□□□□ -0.27
SCMH1-207ENST00000372597 PPLO60437 1756 aa13.35□□□□□ -0.27
SCMH1-207ENST00000372597 WAPLQ7Z5K2 1190 aa13.34□□□□□ -0.27
SCMH1-207ENST00000372597 VIRMAQ69YN4 1812 aaKnown RBP13.34□□□□□ -0.27
SCMH1-207ENST00000372597 GNAI1P63096 354 aa13.34□□□□□ -0.27
SCMH1-207ENST00000372597 NFE2L2Q16236 605 aa13.34□□□□□ -0.27
SCMH1-207ENST00000372597 PHACTR3Q96KR7 559 aa13.34□□□□□ -0.27
SCMH1-207ENST00000372597 XRCC6P12956 609 aaKnown RBP eCLIP13.33□□□□□ -0.286e-6■□□□□ 9.2
SCMH1-207ENST00000372597 GBP4Q96PP9 640 aa13.33□□□□□ -0.28
SCMH1-207ENST00000372597 POLKQ9UBT6 870 aa13.33□□□□□ -0.28
SCMH1-207ENST00000372597 ZNF428Q96B54 188 aa13.33□□□□□ -0.28
SCMH1-207ENST00000372597 GCC1Q96CN9 775 aa13.33□□□□□ -0.28
SCMH1-207ENST00000372597 TSPYL6Q8N831 410 aa13.32□□□□□ -0.28
SCMH1-207ENST00000372597 RSPH6AQ9H0K4 717 aa13.32□□□□□ -0.28
SCMH1-207ENST00000372597 EMILIN1Q9Y6C2 1016 aa13.32□□□□□ -0.28
SCMH1-207ENST00000372597 USP32Q8NFA0 1604 aa13.32□□□□□ -0.28
SCMH1-207ENST00000372597 YTHDC2Q9H6S0 1430 aaKnown RBP13.32□□□□□ -0.28
SCMH1-207ENST00000372597 HECW2Q9P2P5 1572 aa13.32□□□□□ -0.28
SCMH1-207ENST00000372597 TWISTNBQ3B726 338 aaPredicted RBP13.31□□□□□ -0.28
SCMH1-207ENST00000372597 BMP2KLQ5H9B9 411 aa13.31□□□□□ -0.28
SCMH1-207ENST00000372597 PANK2Q9BZ23 570 aa13.31□□□□□ -0.28
SCMH1-207ENST00000372597 VAMP4O75379 141 aa13.31□□□□□ -0.28
SCMH1-207ENST00000372597 FRMPD1Q5SYB0 1578 aa13.31□□□□□ -0.28
SCMH1-207ENST00000372597 APBB1O00213 710 aa13.3□□□□□ -0.28
SCMH1-207ENST00000372597 ZBTB7BO15156 539 aaPredicted RBP13.3□□□□□ -0.28
SCMH1-207ENST00000372597 MLECQ14165 292 aa13.3□□□□□ -0.28
SCMH1-207ENST00000372597 RBM25P49756 843 aaKnown RBP13.3□□□□□ -0.28
SCMH1-207ENST00000372597 ZC3H13Q5T200 1668 aaKnown RBP13.3□□□□□ -0.28
SCMH1-207ENST00000372597 LMOD3Q0VAK6 560 aa13.3□□□□□ -0.28
SCMH1-207ENST00000372597 MRPL50Q8N5N7 158 aaKnown RBP13.3□□□□□ -0.28
SCMH1-207ENST00000372597 NEXMIFQ5QGS0 1516 aa13.29□□□□□ -0.28
SCMH1-207ENST00000372597 MRE11P49959 708 aa13.29□□□□□ -0.28
SCMH1-207ENST00000372597 API5Q9BZZ5 524 aaKnown RBP13.29□□□□□ -0.28
SCMH1-207ENST00000372597 MBIPQ9NS73 344 aa13.29□□□□□ -0.28
SCMH1-207ENST00000372597 GOLGA6L22H0YM25 854 aa13.29□□□□□ -0.28
SCMH1-207ENST00000372597 TBC1D9Q6ZT07 1266 aa13.29□□□□□ -0.28
SCMH1-207ENST00000372597 NME9Q86XW9 330 aa13.29□□□□□ -0.28
SCMH1-207ENST00000372597 TNPO1Q92973 898 aaKnown RBP13.29□□□□□ -0.28
SCMH1-207ENST00000372597 COG3Q96JB2 828 aa13.29□□□□□ -0.28
SCMH1-207ENST00000372597 ADGRB2O60241 1585 aa13.29□□□□□ -0.28
SCMH1-207ENST00000372597 RRAGDQ9NQL2 400 aaPredicted RBP13.28□□□□□ -0.28
SCMH1-207ENST00000372597 IFT57Q9NWB7 429 aa13.28□□□□□ -0.28
SCMH1-207ENST00000372597 CAMSAP1Q5T5Y3 1602 aa13.28□□□□□ -0.28
SCMH1-207ENST00000372597 RRS1Q15050 365 aaKnown RBP13.28□□□□□ -0.28
SCMH1-207ENST00000372597 SNX21Q969T3 373 aa13.28□□□□□ -0.28
SCMH1-207ENST00000372597 TRIM44Q96DX7 344 aaPredicted RBP13.28□□□□□ -0.28
SCMH1-207ENST00000372597 ARHGEF28Q8N1W1 1705 aaKnown RBP13.28□□□□□ -0.28
SCMH1-207ENST00000372597 DCTN1Q14203 1278 aa13.28□□□□□ -0.28
SCMH1-207ENST00000372597 ARHGAP45Q92619 1136 aa13.28□□□□□ -0.28
SCMH1-207ENST00000372597 NAP1L5Q96NT1 182 aaPredicted RBP13.28□□□□□ -0.28
SCMH1-207ENST00000372597 ZRANB1Q9UGI0 708 aa13.27□□□□□ -0.28
SCMH1-207ENST00000372597 ZFYVE9O95405 1425 aa13.27□□□□□ -0.28
SCMH1-207ENST00000372597 FAM83GA6ND36 823 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms