RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 SULT6B1Q6IMI4 303 aa12.73□□□□□ -0.37
NUP188-201ENST00000372577 ANKLE2Q86XL3 938 aa12.73□□□□□ -0.37
NUP188-201ENST00000372577 PSMA5P28066 241 aa12.72□□□□□ -0.37
NUP188-201ENST00000372577 SMC3Q9UQE7 1217 aa12.72□□□□□ -0.37
NUP188-201ENST00000372577 GOLGA6L19H0YKK7 550 aa12.72□□□□□ -0.37
NUP188-201ENST00000372577 PROSER2Q86WR7 435 aaPredicted RBP12.72□□□□□ -0.37
NUP188-201ENST00000372577 NFE2L2Q16236 605 aa12.72□□□□□ -0.37
NUP188-201ENST00000372577 NUP153P49790 1475 aaKnown RBP12.71□□□□□ -0.37
NUP188-201ENST00000372577 RALGAPBQ86X10 1494 aa12.71□□□□□ -0.37
NUP188-201ENST00000372577 PLCH2O75038 1416 aa12.71□□□□□ -0.37
NUP188-201ENST00000372577 RABEP1Q15276 862 aa12.71□□□□□ -0.37
NUP188-201ENST00000372577 FOXD4L5Q5VV16 416 aaPredicted RBP12.71□□□□□ -0.37
NUP188-201ENST00000372577 FOXD4L4Q8WXT5 416 aaPredicted RBP12.71□□□□□ -0.37
NUP188-201ENST00000372577 KIF21AQ7Z4S6 1674 aa12.71□□□□□ -0.37
NUP188-201ENST00000372577 BCAR3O75815 825 aa12.71□□□□□ -0.37
NUP188-201ENST00000372577 KIAA0556O60303 1618 aa12.71□□□□□ -0.38
NUP188-201ENST00000372577 TATP17735 454 aaPredicted RBP12.71□□□□□ -0.38
NUP188-201ENST00000372577 CPLX1O14810 134 aa12.71□□□□□ -0.38
NUP188-201ENST00000372577 CCDC184Q52MB2 194 aa12.71□□□□□ -0.38
NUP188-201ENST00000372577 ATP10BO94823 1461 aa12.71□□□□□ -0.38
NUP188-201ENST00000372577 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.7□□□□□ -0.38
NUP188-201ENST00000372577 MAPKBP1O60336 1514 aa12.7□□□□□ -0.38
NUP188-201ENST00000372577 TSR2Q969E8 191 aaKnown RBP12.7□□□□□ -0.38
NUP188-201ENST00000372577 BACH2Q9BYV9 841 aa12.7□□□□□ -0.38
NUP188-201ENST00000372577 BECN2A8MW95 431 aa12.7□□□□□ -0.38
NUP188-201ENST00000372577 NUTM2GQ5VZR2 741 aa12.7□□□□□ -0.38
NUP188-201ENST00000372577 NUDT16Q96DE0 195 aaKnown RBP12.7□□□□□ -0.38
NUP188-201ENST00000372577 SHANK2Q9UPX8 1470 aa12.69□□□□□ -0.38
NUP188-201ENST00000372577 TMPOP42166 694 aaKnown RBP12.69□□□□□ -0.38
NUP188-201ENST00000372577 SRCIN1Q9C0H9 1055 aa12.69□□□□□ -0.38
NUP188-201ENST00000372577 HOOK1Q9UJC3 728 aaKnown RBP12.69□□□□□ -0.38
NUP188-201ENST00000372577 WDR62O43379 1518 aa12.69□□□□□ -0.38
NUP188-201ENST00000372577 SURF6O75683 361 aaKnown RBP12.68□□□□□ -0.38
NUP188-201ENST00000372577 HDGFL1Q5TGJ6 251 aa12.68□□□□□ -0.38
NUP188-201ENST00000372577 NKTRP30414 1462 aaKnown RBP12.68□□□□□ -0.38
NUP188-201ENST00000372577 SLC4A2P04920 1241 aa12.68□□□□□ -0.38
NUP188-201ENST00000372577 ALDH1L2Q3SY69 923 aa12.68□□□□□ -0.38
NUP188-201ENST00000372577 C11orf95C9JLR9 678 aaPredicted RBP12.68□□□□□ -0.38
NUP188-201ENST00000372577 KDM5BQ9UGL1 1544 aa12.68□□□□□ -0.38
NUP188-201ENST00000372577 MCTP1Q6DN14 999 aa12.68□□□□□ -0.38
NUP188-201ENST00000372577 SPG7Q9UQ90 795 aa12.68□□□□□ -0.38
NUP188-201ENST00000372577 KCNH5Q8NCM2 988 aa12.67□□□□□ -0.38
NUP188-201ENST00000372577 C14orf93Q9H972 538 aaKnown RBP12.67□□□□□ -0.38
NUP188-201ENST00000372577 RPAP2Q8IXW5 612 aaPredicted RBP12.67□□□□□ -0.38
NUP188-201ENST00000372577 EIF2AK4Q9P2K8 1649 aaKnown RBP12.67□□□□□ -0.38
NUP188-201ENST00000372577 ERICH2A1L162 156 aa12.67□□□□□ -0.38
NUP188-201ENST00000372577 DNAJC5BQ9UF47 199 aa12.67□□□□□ -0.38
NUP188-201ENST00000372577 AIMP1Q12904 312 aaKnown RBP12.67□□□□□ -0.38
NUP188-201ENST00000372577 NFKBIBQ15653 356 aa12.67□□□□□ -0.38
NUP188-201ENST00000372577 APPP05067 770 aa12.66□□□□□ -0.38
NUP188-201ENST00000372577 VPS37DQ86XT2 251 aa12.66□□□□□ -0.38
NUP188-201ENST00000372577 MARCH6O60337 910 aa12.66□□□□□ -0.38
NUP188-201ENST00000372577 IFT57Q9NWB7 429 aa12.66□□□□□ -0.38
NUP188-201ENST00000372577 PTPRKQ15262 1439 aa12.66□□□□□ -0.38
NUP188-201ENST00000372577 TPM3P06753 285 aa12.66□□□□□ -0.38
NUP188-201ENST00000372577 RALYLQ86SE5 291 aaKnown RBP12.66□□□□□ -0.38
NUP188-201ENST00000372577 ADGRF5Q8IZF2 1346 aa12.66□□□□□ -0.38
NUP188-201ENST00000372577 TPM1P09493 284 aa12.66□□□□□ -0.38
NUP188-201ENST00000372577 NOS1P29475 1434 aa12.65□□□□□ -0.38
NUP188-201ENST00000372577 LRRCC1Q9C099 1032 aa12.65□□□□□ -0.38
NUP188-201ENST00000372577 RSPH6AQ9H0K4 717 aa12.65□□□□□ -0.38
NUP188-201ENST00000372577 CLSTN1O94985 981 aa12.65□□□□□ -0.38
NUP188-201ENST00000372577 TPM2P07951 284 aa12.65□□□□□ -0.38
NUP188-201ENST00000372577 ZNF530Q6P9A1 599 aaPredicted RBP12.65□□□□□ -0.38
NUP188-201ENST00000372577 SYTL4Q96C24 671 aaPredicted RBP12.65□□□□□ -0.38
NUP188-201ENST00000372577 CWC22Q9HCG8 908 aaKnown RBP12.65□□□□□ -0.38
NUP188-201ENST00000372577 MBD3O95983 291 aa12.65□□□□□ -0.38
NUP188-201ENST00000372577 FSD1Q9BTV5 496 aa12.65□□□□□ -0.38
NUP188-201ENST00000372577 PDCP20941 246 aa12.65□□□□□ -0.38
NUP188-201ENST00000372577 TPD52L1Q16890 204 aaPredicted RBP12.65□□□□□ -0.38
NUP188-201ENST00000372577 CCDC47Q96A33 483 aaKnown RBP12.65□□□□□ -0.38
NUP188-201ENST00000372577 LETM1O95202 739 aaPredicted RBP12.64□□□□□ -0.39
NUP188-201ENST00000372577 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
NUP188-201ENST00000372577 CHD1LQ86WJ1 897 aa12.64□□□□□ -0.39
NUP188-201ENST00000372577 NEUROD6Q96NK8 337 aa12.64□□□□□ -0.39
NUP188-201ENST00000372577 BICD2Q8TD16 824 aa12.64□□□□□ -0.39
NUP188-201ENST00000372577 VPS37CA5D8V6 355 aaPredicted RBP12.64□□□□□ -0.39
NUP188-201ENST00000372577 SAFBQ15424 915 aaKnown RBP eCLIP12.64□□□□□ -0.39
NUP188-201ENST00000372577 TSR1Q2NL82 804 aaKnown RBP12.64□□□□□ -0.39
NUP188-201ENST00000372577 MRE11P49959 708 aa12.63□□□□□ -0.39
NUP188-201ENST00000372577 ANKRD36BQ8N2N9 1353 aa12.63□□□□□ -0.39
NUP188-201ENST00000372577 ARHGEF12Q9NZN5 1544 aa12.63□□□□□ -0.39
NUP188-201ENST00000372577 NFXL1Q6ZNB6 911 aa12.63□□□□□ -0.39
NUP188-201ENST00000372577 CCDC73Q6ZRK6 1079 aa12.63□□□□□ -0.39
NUP188-201ENST00000372577 SLC26A8Q96RN1 970 aa12.63□□□□□ -0.39
NUP188-201ENST00000372577 TBC1D2BQ9UPU7 963 aa12.62□□□□□ -0.39
NUP188-201ENST00000372577 ZNF518AQ6AHZ1 1483 aa12.62□□□□□ -0.39
NUP188-201ENST00000372577 SYCP2Q9BX26 1530 aa12.62□□□□□ -0.39
NUP188-201ENST00000372577 GNAT3A8MTJ3 354 aa12.62□□□□□ -0.39
NUP188-201ENST00000372577 WASLO00401 505 aaPredicted RBP12.62□□□□□ -0.39
NUP188-201ENST00000372577 IDI1Q13907 227 aa12.62□□□□□ -0.39
NUP188-201ENST00000372577 ANKRD20A12PQ8NF67 263 aa12.62□□□□□ -0.39
NUP188-201ENST00000372577 PUS7Q96PZ0 661 aaKnown RBP12.62□□□□□ -0.39
NUP188-201ENST00000372577 SASS6Q6UVJ0 657 aa12.61□□□□□ -0.39
NUP188-201ENST00000372577 PDIA4P13667 645 aaKnown RBP12.61□□□□□ -0.39
NUP188-201ENST00000372577 RRS1Q15050 365 aaKnown RBP12.61□□□□□ -0.39
NUP188-201ENST00000372577 WASHC4Q2M389 1173 aa12.61□□□□□ -0.39
NUP188-201ENST00000372577 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
NUP188-201ENST00000372577 PRAG1Q86YV5 1406 aa12.61□□□□□ -0.39
NUP188-201ENST00000372577 RARSP54136 660 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms