RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 CRBNQ96SW2 442 aa23.37■■□□□ 1.33
CTSA-204ENST00000372484 NCKAP5LQ9HCH0 1330 aa23.37■■□□□ 1.33
CTSA-204ENST00000372484 PHF23Q9BUL5 403 aaPredicted RBP23.36■■□□□ 1.33
CTSA-204ENST00000372484 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.35■■□□□ 1.33
CTSA-204ENST00000372484 CCDC27Q2M243 656 aa23.35■■□□□ 1.33
CTSA-204ENST00000372484 C20orf194Q5TEA3 1177 aa23.35■■□□□ 1.33
CTSA-204ENST00000372484 PNPLA6Q8IY17 1366 aa23.35■■□□□ 1.33
CTSA-204ENST00000372484 MON2Q7Z3U7 1717 aa23.34■■□□□ 1.33
CTSA-204ENST00000372484 ADGRB2O60241 1585 aa23.34■■□□□ 1.33
CTSA-204ENST00000372484 ITSN1Q15811 1721 aa23.34■■□□□ 1.33
CTSA-204ENST00000372484 DIAPH1O60610 1272 aaKnown RBP23.34■■□□□ 1.33
CTSA-204ENST00000372484 WDR63Q8IWG1 891 aa23.34■■□□□ 1.33
CTSA-204ENST00000372484 MAP2P11137 1827 aaKnown RBP23.33■■□□□ 1.33
CTSA-204ENST00000372484 PTPRUQ92729 1446 aa23.33■■□□□ 1.33
CTSA-204ENST00000372484 AKAP12Q02952 1782 aa23.33■■□□□ 1.33
CTSA-204ENST00000372484 NCBP3Q53F19 620 aaKnown RBP23.33■■□□□ 1.32
CTSA-204ENST00000372484 PRR36Q9H6K5 1346 aa23.33■■□□□ 1.32
CTSA-204ENST00000372484 NME9Q86XW9 330 aa23.32■■□□□ 1.32
CTSA-204ENST00000372484 TBX22Q9Y458 520 aa23.32■■□□□ 1.32
CTSA-204ENST00000372484 PPM1GO15355 546 aaPredicted RBP23.31■■□□□ 1.32
CTSA-204ENST00000372484 POLKQ9UBT6 870 aa23.31■■□□□ 1.32
CTSA-204ENST00000372484 FBLN1P23142 703 aa23.3■■□□□ 1.32
CTSA-204ENST00000372484 PLEKHF1Q96S99 279 aa23.3■■□□□ 1.32
CTSA-204ENST00000372484 ZNF692Q9BU19 519 aaPredicted RBP23.3■■□□□ 1.32
CTSA-204ENST00000372484 AMOTL2Q9Y2J4 779 aa23.3■■□□□ 1.32
CTSA-204ENST00000372484 MAPK8IP3Q9UPT6 1336 aa23.29■■□□□ 1.32
CTSA-204ENST00000372484 BCAR3O75815 825 aa23.29■■□□□ 1.32
CTSA-204ENST00000372484 DIP2AQ14689 1571 aa23.28■■□□□ 1.32
CTSA-204ENST00000372484 COG3Q96JB2 828 aa23.27■■□□□ 1.32
CTSA-204ENST00000372484 ZRANB1Q9UGI0 708 aa23.27■■□□□ 1.32
CTSA-204ENST00000372484 RIMS1Q86UR5 1692 aaKnown RBP23.27■■□□□ 1.31
CTSA-204ENST00000372484 PNNQ9H307 717 aaKnown RBP23.26■■□□□ 1.31
CTSA-204ENST00000372484 TOPAZ1Q8N9V7 1692 aa23.26■■□□□ 1.31
CTSA-204ENST00000372484 NUTM2FA1L443 756 aa23.26■■□□□ 1.31
CTSA-204ENST00000372484 CEP170BQ9Y4F5 1589 aaPredicted RBP23.26■■□□□ 1.31
CTSA-204ENST00000372484 TMPOP42166 694 aaKnown RBP23.25■■□□□ 1.31
CTSA-204ENST00000372484 PTCH1Q13635 1447 aa23.25■■□□□ 1.31
CTSA-204ENST00000372484 MYH16Q9H6N6 1097 aa23.24■■□□□ 1.31
CTSA-204ENST00000372484 AATKQ6ZMQ8 1374 aa23.23■■□□□ 1.31
CTSA-204ENST00000372484 EMILIN1Q9Y6C2 1016 aa23.23■■□□□ 1.31
CTSA-204ENST00000372484 ACEP12821 1306 aa23.23■■□□□ 1.31
CTSA-204ENST00000372484 FCHSD2O94868 740 aa23.22■■□□□ 1.31
CTSA-204ENST00000372484 PLEKHG3A1L390 1219 aa23.21■■□□□ 1.31
CTSA-204ENST00000372484 CDK12Q9NYV4 1490 aaPredicted RBP23.2■■□□□ 1.31
CTSA-204ENST00000372484 NRKQ7Z2Y5 1582 aa23.2■■□□□ 1.3
CTSA-204ENST00000372484 TRIM35Q9UPQ4 493 aa23.2■■□□□ 1.3
CTSA-204ENST00000372484 LRRC7Q96NW7 1537 aa23.2■■□□□ 1.3
CTSA-204ENST00000372484 XRN1Q8IZH2 1706 aaKnown RBP23.19■■□□□ 1.3
CTSA-204ENST00000372484 RIPK4P57078 832 aa23.18■■□□□ 1.3
CTSA-204ENST00000372484 TTC21BQ7Z4L5 1316 aa23.18■■□□□ 1.3
CTSA-204ENST00000372484 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
CTSA-204ENST00000372484 RARSP54136 660 aaKnown RBP23.18■■□□□ 1.3
CTSA-204ENST00000372484 RSPH6AQ9H0K4 717 aa23.18■■□□□ 1.3
CTSA-204ENST00000372484 NEFMP07197 916 aa23.17■■□□□ 1.3
CTSA-204ENST00000372484 RRS1Q15050 365 aaKnown RBP23.17■■□□□ 1.3
CTSA-204ENST00000372484 USP6P35125 1406 aa23.17■■□□□ 1.3
CTSA-204ENST00000372484 PRKAR2BP31323 418 aa23.17■■□□□ 1.3
CTSA-204ENST00000372484 PDE3AQ14432 1141 aa23.16■■□□□ 1.3
CTSA-204ENST00000372484 IL13P35225 146 aa23.15■■□□□ 1.3
CTSA-204ENST00000372484 HMOX1P09601 288 aa23.14■■□□□ 1.3
CTSA-204ENST00000372484 FANCIQ9NVI1 1328 aa23.14■■□□□ 1.29
CTSA-204ENST00000372484 PIK3R4Q99570 1358 aa23.14■■□□□ 1.29
CTSA-204ENST00000372484 FRAT1Q92837 279 aaPredicted RBP23.14■■□□□ 1.29
CTSA-204ENST00000372484 RGPD8O14715 1765 aaPredicted RBP23.14■■□□□ 1.29
CTSA-204ENST00000372484 KCNA6P17658 529 aa23.13■■□□□ 1.29
CTSA-204ENST00000372484 TSR2Q969E8 191 aaKnown RBP23.13■■□□□ 1.29
CTSA-204ENST00000372484 IL16Q14005 1332 aa23.13■■□□□ 1.29
CTSA-204ENST00000372484 ADAMTSL3P82987 1691 aa23.13■■□□□ 1.29
CTSA-204ENST00000372484 ZNF142P52746 1687 aaPredicted RBP23.12■■□□□ 1.29
CTSA-204ENST00000372484 TCERG1O14776 1098 aaKnown RBP23.12■■□□□ 1.29
CTSA-204ENST00000372484 ANKLE2Q86XL3 938 aa23.12■■□□□ 1.29
CTSA-204ENST00000372484 PMFBP1Q8TBY8 1022 aa23.12■■□□□ 1.29
CTSA-204ENST00000372484 OVOS2A0A0J9YW53 1432 aa23.11■■□□□ 1.29
CTSA-204ENST00000372484 OVOS2Q6IE36 1432 aa23.11■■□□□ 1.29
CTSA-204ENST00000372484 KDM2BQ8NHM5 1336 aa23.11■■□□□ 1.29
CTSA-204ENST00000372484 CT47B1P0C2W7 299 aaPredicted RBP23.1■■□□□ 1.29
CTSA-204ENST00000372484 CENPQQ7L2Z9 268 aaPredicted RBP23.1■■□□□ 1.29
CTSA-204ENST00000372484 BCL2L13Q9BXK5 485 aa23.1■■□□□ 1.29
CTSA-204ENST00000372484 SETD1BQ9UPS6 1966 aaKnown RBP23.09■■□□□ 1.29
CTSA-204ENST00000372484 NGDNQ8NEJ9 315 aaKnown RBP23.09■■□□□ 1.29
CTSA-204ENST00000372484 PANK1Q8TE04 598 aa23.09■■□□□ 1.29
CTSA-204ENST00000372484 PHACTR3Q96KR7 559 aa23.09■■□□□ 1.29
CTSA-204ENST00000372484 SSH2Q76I76 1423 aa23.08■■□□□ 1.29
CTSA-204ENST00000372484 NALCNQ8IZF0 1738 aa23.08■■□□□ 1.29
CTSA-204ENST00000372484 EXOSC9Q06265 439 aaKnown RBP23.08■■□□□ 1.28
CTSA-204ENST00000372484 NFE2L2Q16236 605 aa23.08■■□□□ 1.28
CTSA-204ENST00000372484 TTC21AQ8NDW8 1320 aa23.07■■□□□ 1.28
CTSA-204ENST00000372484 COG6Q9Y2V7 657 aa23.06■■□□□ 1.28
CTSA-204ENST00000372484 CHD2O14647 1828 aaKnown RBP23.05■■□□□ 1.28
CTSA-204ENST00000372484 ANKARQ7Z5J8 1434 aa23.05■■□□□ 1.28
CTSA-204ENST00000372484 USP31Q70CQ4 1352 aa23.04■■□□□ 1.28
CTSA-204ENST00000372484 MS4A1P11836 297 aa23.03■■□□□ 1.28
CTSA-204ENST00000372484 FMN2Q9NZ56 1722 aa23.03■■□□□ 1.28
CTSA-204ENST00000372484 SOX12O15370 315 aa23.02■■□□□ 1.28
CTSA-204ENST00000372484 EIF4A2Q14240 407 aaKnown RBP23.02■■□□□ 1.28
CTSA-204ENST00000372484 SKAP1Q86WV1 359 aa23.01■■□□□ 1.27
CTSA-204ENST00000372484 CLUAP1Q96AJ1 413 aa23.01■■□□□ 1.27
CTSA-204ENST00000372484 CALD1Q05682 793 aaKnown RBP23■■□□□ 1.27
CTSA-204ENST00000372484 SMC4Q9NTJ3 1288 aa23■■□□□ 1.27
CTSA-204ENST00000372484 DLG5Q8TDM6 1919 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms