RNA–Protein interactions for RNA: ENST00000372277.7

TMEM254-204, Transcript of transmembrane protein 254, humanhuman

TSL 5 BASIC

Gene TMEM254, Length 366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-204ENST00000372277 CDK19Q9BWU1 502 aa20.91■□□□□ 0.94
TMEM254-204ENST00000372277 BTG4Q9NY30 223 aa20.9■□□□□ 0.94
TMEM254-204ENST00000372277 CCDC61Q9Y6R9 512 aa20.9■□□□□ 0.94
TMEM254-204ENST00000372277 COL14A1Q05707 1796 aaKnown RBP20.89■□□□□ 0.93
TMEM254-204ENST00000372277 POLR3AO14802 1390 aaPredicted RBP20.88■□□□□ 0.93
TMEM254-204ENST00000372277 KRT27Q7Z3Y8 459 aa20.88■□□□□ 0.93
TMEM254-204ENST00000372277 PLEKHG3A1L390 1219 aa20.87■□□□□ 0.93
TMEM254-204ENST00000372277 SF3B2Q13435 895 aaKnown RBP20.87■□□□□ 0.93
TMEM254-204ENST00000372277 PRDM11Q9NQV5 511 aa20.86■□□□□ 0.93
TMEM254-204ENST00000372277 NRAPQ86VF7 1730 aa20.84■□□□□ 0.93
TMEM254-204ENST00000372277 SRCAPQ6ZRS2 3230 aa20.84■□□□□ 0.93
TMEM254-204ENST00000372277 NBPF1Q3BBV0 1214 aa20.84■□□□□ 0.93
TMEM254-204ENST00000372277 NBPF8Q3BBV2 869 aa20.84■□□□□ 0.93
TMEM254-204ENST00000372277 ACEP12821 1306 aa20.83■□□□□ 0.93
TMEM254-204ENST00000372277 SPATA31A5Q5VU36 1347 aa20.83■□□□□ 0.93
TMEM254-204ENST00000372277 SPATA31A7Q8IWB4 1347 aa20.83■□□□□ 0.93
TMEM254-204ENST00000372277 CENPJQ9HC77 1338 aaPredicted RBP20.83■□□□□ 0.93
TMEM254-204ENST00000372277 BRWD3Q6RI45 1802 aa20.83■□□□□ 0.92
TMEM254-204ENST00000372277 CRYBG1Q9Y4K1 1723 aa20.82■□□□□ 0.92
TMEM254-204ENST00000372277 A0A0G2JS52 829 aa20.82■□□□□ 0.92
TMEM254-204ENST00000372277 MYT1Q01538 1121 aa20.82■□□□□ 0.92
TMEM254-204ENST00000372277 FAM98CQ17RN3 349 aaKnown RBP20.82■□□□□ 0.92
TMEM254-204ENST00000372277 TOPAZ1Q8N9V7 1692 aa20.81■□□□□ 0.92
TMEM254-204ENST00000372277 BRD4O60885 1362 aaPredicted RBP20.81■□□□□ 0.92
TMEM254-204ENST00000372277 KIAA0232Q92628 1395 aa20.8■□□□□ 0.92
TMEM254-204ENST00000372277 SRPK2P78362 688 aaKnown RBP20.79■□□□□ 0.92
TMEM254-204ENST00000372277 ABTB2Q8N961 1025 aa20.77■□□□□ 0.92
TMEM254-204ENST00000372277 L3MBTL2Q969R5 705 aa20.77■□□□□ 0.92
TMEM254-204ENST00000372277 DEFB132Q7Z7B7 95 aa20.76■□□□□ 0.91
TMEM254-204ENST00000372277 PPIP5K1Q6PFW1 1433 aa20.76■□□□□ 0.91
TMEM254-204ENST00000372277 SPATA31A1Q5TZJ5 1347 aa20.76■□□□□ 0.91
TMEM254-204ENST00000372277 PHRF1Q9P1Y6 1649 aaKnown RBP20.75■□□□□ 0.91
TMEM254-204ENST00000372277 BAG6P46379 1132 aa20.75■□□□□ 0.91
TMEM254-204ENST00000372277 ZC3H6P61129 1189 aaKnown RBP20.75■□□□□ 0.91
TMEM254-204ENST00000372277 NLRP13Q86W25 1043 aa20.75■□□□□ 0.91
TMEM254-204ENST00000372277 USP19O94966 1318 aa20.75■□□□□ 0.91
TMEM254-204ENST00000372277 CPDO75976 1380 aa20.74■□□□□ 0.91
TMEM254-204ENST00000372277 NUTM2GQ5VZR2 741 aa20.74■□□□□ 0.91
TMEM254-204ENST00000372277 CHRNA2Q15822 529 aa20.73■□□□□ 0.91
TMEM254-204ENST00000372277 CABP2Q9NPB3 220 aa20.73■□□□□ 0.91
TMEM254-204ENST00000372277 THSD7AQ9UPZ6 1657 aa20.73■□□□□ 0.91
TMEM254-204ENST00000372277 EVA1CP58658 441 aa20.71■□□□□ 0.91
TMEM254-204ENST00000372277 STRN4Q9NRL3 753 aa20.71■□□□□ 0.91
TMEM254-204ENST00000372277 EVC2Q86UK5 1308 aa20.71■□□□□ 0.91
TMEM254-204ENST00000372277 BARGINQ6ZT62 677 aa20.7■□□□□ 0.9
TMEM254-204ENST00000372277 NRKQ7Z2Y5 1582 aa20.7■□□□□ 0.9
TMEM254-204ENST00000372277 QRICH2Q9H0J4 1663 aa20.7■□□□□ 0.9
TMEM254-204ENST00000372277 SSH2Q76I76 1423 aa20.7■□□□□ 0.9
TMEM254-204ENST00000372277 GCP02774 474 aa20.69■□□□□ 0.9
TMEM254-204ENST00000372277 CABP1Q9NZU7 370 aa20.69■□□□□ 0.9
TMEM254-204ENST00000372277 SIN3AQ96ST3 1273 aa20.68■□□□□ 0.9
TMEM254-204ENST00000372277 ROCK2O75116 1388 aaKnown RBP20.68■□□□□ 0.9
TMEM254-204ENST00000372277 USP6P35125 1406 aa20.68■□□□□ 0.9
TMEM254-204ENST00000372277 FAM196AQ6ZSG2 479 aa20.67■□□□□ 0.9
TMEM254-204ENST00000372277 DISP2A7MBM2 1401 aa20.67■□□□□ 0.9
TMEM254-204ENST00000372277 THRAP3Q9Y2W1 955 aaKnown RBP20.66■□□□□ 0.9
TMEM254-204ENST00000372277 TRPM1Q7Z4N2 1603 aa20.66■□□□□ 0.9
TMEM254-204ENST00000372277 CAMTA1Q9Y6Y1 1673 aa20.66■□□□□ 0.9
TMEM254-204ENST00000372277 RGPD1P0DJD0 1748 aa20.65■□□□□ 0.9
TMEM254-204ENST00000372277 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
TMEM254-204ENST00000372277 TCP11L2Q8N4U5 519 aa20.65■□□□□ 0.9
TMEM254-204ENST00000372277 ZNF692Q9BU19 519 aaPredicted RBP20.65■□□□□ 0.9
TMEM254-204ENST00000372277 LMO7Q8WWI1 1683 aa20.64■□□□□ 0.9
TMEM254-204ENST00000372277 NLRP6P59044 892 aa20.64■□□□□ 0.89
TMEM254-204ENST00000372277 PDE3BQ13370 1112 aa20.63■□□□□ 0.89
TMEM254-204ENST00000372277 FAM182BQ5T319 152 aa20.63■□□□□ 0.89
TMEM254-204ENST00000372277 LARP1Q6PKG0 1096 aaKnown RBP20.63■□□□□ 0.89
TMEM254-204ENST00000372277 USP35Q9P2H5 1018 aa20.63■□□□□ 0.89
TMEM254-204ENST00000372277 AATKQ6ZMQ8 1374 aa20.62■□□□□ 0.89
TMEM254-204ENST00000372277 C11orf95C9JLR9 678 aaPredicted RBP20.62■□□□□ 0.89
TMEM254-204ENST00000372277 EN1Q05925 392 aaPredicted RBP20.61■□□□□ 0.89
TMEM254-204ENST00000372277 PARD3Q8TEW0 1356 aa20.6■□□□□ 0.89
TMEM254-204ENST00000372277 SLIT3O75094 1523 aa20.6■□□□□ 0.89
TMEM254-204ENST00000372277 COL5A2P05997 1499 aaPredicted RBP20.6■□□□□ 0.89
TMEM254-204ENST00000372277 SBNO2Q9Y2G9 1366 aa20.59■□□□□ 0.89
TMEM254-204ENST00000372277 CRB1P82279 1406 aa20.59■□□□□ 0.89
TMEM254-204ENST00000372277 TTC21AQ8NDW8 1320 aa20.58■□□□□ 0.89
TMEM254-204ENST00000372277 TRIM37O94972 964 aa20.58■□□□□ 0.89
TMEM254-204ENST00000372277 KCNH5Q8NCM2 988 aa20.58■□□□□ 0.89
TMEM254-204ENST00000372277 TTC21BQ7Z4L5 1316 aa20.56■□□□□ 0.88
TMEM254-204ENST00000372277 TNS1Q9HBL0 1735 aaKnown RBP20.56■□□□□ 0.88
TMEM254-204ENST00000372277 CAMKK2Q96RR4 588 aa20.56■□□□□ 0.88
TMEM254-204ENST00000372277 LRP5O75197 1615 aa20.56■□□□□ 0.88
TMEM254-204ENST00000372277 CPSF1Q10570 1443 aaKnown RBP20.55■□□□□ 0.88
TMEM254-204ENST00000372277 APBA3O96018 575 aa20.55■□□□□ 0.88
TMEM254-204ENST00000372277 PSDA5PKW4 1024 aaPredicted RBP20.54■□□□□ 0.88
TMEM254-204ENST00000372277 PIK3C2AO00443 1686 aa20.54■□□□□ 0.88
TMEM254-204ENST00000372277 ZBTB7CA1YPR0 619 aa20.53■□□□□ 0.88
TMEM254-204ENST00000372277 EZH2Q15910 746 aaKnown RBP20.53■□□□□ 0.88
TMEM254-204ENST00000372277 CARD11Q9BXL7 1154 aa20.53■□□□□ 0.88
TMEM254-204ENST00000372277 KTN1Q86UP2 1357 aaKnown RBP20.52■□□□□ 0.88
TMEM254-204ENST00000372277 ARHGEF25Q86VW2 580 aa20.52■□□□□ 0.88
TMEM254-204ENST00000372277 CDCA7Q9BWT1 371 aaPredicted RBP20.52■□□□□ 0.88
TMEM254-204ENST00000372277 PARP4Q9UKK3 1724 aaKnown RBP20.52■□□□□ 0.88
TMEM254-204ENST00000372277 WDR17Q8IZU2 1322 aa20.52■□□□□ 0.87
TMEM254-204ENST00000372277 TOM1L2Q6ZVM7 507 aa20.51■□□□□ 0.87
TMEM254-204ENST00000372277 TONSLQ96HA7 1378 aa20.5■□□□□ 0.87
TMEM254-204ENST00000372277 R3HDM1Q15032 1099 aaKnown RBP20.5■□□□□ 0.87
TMEM254-204ENST00000372277 AKAP12Q02952 1782 aa20.49■□□□□ 0.87
TMEM254-204ENST00000372277 PUS7Q96PZ0 661 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms