RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TPM3P06753 285 aa16.13■□□□□ 0.17
RAPGEF1-201ENST00000372189 TCP11L2Q8N4U5 519 aa16.13■□□□□ 0.17
RAPGEF1-201ENST00000372189 UBTFL1P0CB47 393 aaPredicted RBP16.13■□□□□ 0.17
RAPGEF1-201ENST00000372189 SULT6B1Q6IMI4 303 aa16.13■□□□□ 0.17
RAPGEF1-201ENST00000372189 NUDT16Q96DE0 195 aaKnown RBP16.13■□□□□ 0.17
RAPGEF1-201ENST00000372189 NBPF8Q3BBV2 869 aa16.12■□□□□ 0.17
RAPGEF1-201ENST00000372189 CEBPAP49715 358 aaPredicted RBP16.12■□□□□ 0.17
RAPGEF1-201ENST00000372189 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.12■□□□□ 0.17
RAPGEF1-201ENST00000372189 GOLGA6L19H0YKK7 550 aa16.11■□□□□ 0.17
RAPGEF1-201ENST00000372189 ZNF530Q6P9A1 599 aaPredicted RBP16.11■□□□□ 0.17
RAPGEF1-201ENST00000372189 ABCC5O15440 1437 aa16.11■□□□□ 0.17
RAPGEF1-201ENST00000372189 FAM177BA6PVY3 158 aa16.11■□□□□ 0.17
RAPGEF1-201ENST00000372189 H3BQV1 296 aa16.11■□□□□ 0.17
RAPGEF1-201ENST00000372189 RDXP35241 583 aaKnown RBP16.11■□□□□ 0.17
RAPGEF1-201ENST00000372189 IFFO2Q5TF58 517 aa16.11■□□□□ 0.17
RAPGEF1-201ENST00000372189 SF3A1Q15459 793 aaKnown RBP16.11■□□□□ 0.17
RAPGEF1-201ENST00000372189 NEUROD6Q96NK8 337 aa16.11■□□□□ 0.17
RAPGEF1-201ENST00000372189 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
RAPGEF1-201ENST00000372189 FAM184AQ8NB25 1140 aa16.1■□□□□ 0.17
RAPGEF1-201ENST00000372189 UBE2Q2Q8WVN8 375 aa16.1■□□□□ 0.17
RAPGEF1-201ENST00000372189 FBXO31Q5XUX0 539 aaPredicted RBP16.1■□□□□ 0.17
RAPGEF1-201ENST00000372189 DMRT2Q9Y5R5 561 aa16.1■□□□□ 0.17
RAPGEF1-201ENST00000372189 ERC2O15083 957 aa16.1■□□□□ 0.17
RAPGEF1-201ENST00000372189 ZKSCAN1P17029 563 aaPredicted RBP16.09■□□□□ 0.17
RAPGEF1-201ENST00000372189 TEX35Q5T0J7 233 aa16.09■□□□□ 0.17
RAPGEF1-201ENST00000372189 KCNH5Q8NCM2 988 aa16.09■□□□□ 0.17
RAPGEF1-201ENST00000372189 CCDC61Q9Y6R9 512 aa16.09■□□□□ 0.17
RAPGEF1-201ENST00000372189 TEX14Q8IWB6 1497 aa16.09■□□□□ 0.17
RAPGEF1-201ENST00000372189 NAIPQ13075 1403 aa16.08■□□□□ 0.17
RAPGEF1-201ENST00000372189 WAPLQ7Z5K2 1190 aa16.08■□□□□ 0.17
RAPGEF1-201ENST00000372189 REC8O95072 547 aa16.08■□□□□ 0.16
RAPGEF1-201ENST00000372189 TRDNQ13061 729 aa16.08■□□□□ 0.16
RAPGEF1-201ENST00000372189 CPLX2Q6PUV4 134 aaKnown RBP16.08■□□□□ 0.16
RAPGEF1-201ENST00000372189 ZC3H6P61129 1189 aaKnown RBP16.07■□□□□ 0.16
RAPGEF1-201ENST00000372189 GPS2Q13227 327 aa16.07■□□□□ 0.16
RAPGEF1-201ENST00000372189 BECN2A8MW95 431 aa16.07■□□□□ 0.16
RAPGEF1-201ENST00000372189 FAM43AQ8N2R8 423 aa16.07■□□□□ 0.16
RAPGEF1-201ENST00000372189 ANO2Q9NQ90 1003 aa16.07■□□□□ 0.16
RAPGEF1-201ENST00000372189 FAM135AQ9P2D6 1515 aa16.07■□□□□ 0.16
RAPGEF1-201ENST00000372189 RRS1Q15050 365 aaKnown RBP16.07■□□□□ 0.16
RAPGEF1-201ENST00000372189 PAXIP1Q6ZW49 1069 aaPredicted RBP16.06■□□□□ 0.16
RAPGEF1-201ENST00000372189 AMOTL2Q9Y2J4 779 aa16.06■□□□□ 0.16
RAPGEF1-201ENST00000372189 NFKBIBQ15653 356 aa16.06■□□□□ 0.16
RAPGEF1-201ENST00000372189 RNF20Q5VTR2 975 aa16.06■□□□□ 0.16
RAPGEF1-201ENST00000372189 DHX16O60231 1041 aaKnown RBP16.06■□□□□ 0.16
RAPGEF1-201ENST00000372189 CCDC27Q2M243 656 aa16.06■□□□□ 0.16
RAPGEF1-201ENST00000372189 TWISTNBQ3B726 338 aaPredicted RBP16.06■□□□□ 0.16
RAPGEF1-201ENST00000372189 ASXL2Q76L83 1435 aa16.05■□□□□ 0.16
RAPGEF1-201ENST00000372189 GNAI3P08754 354 aa16.05■□□□□ 0.16
RAPGEF1-201ENST00000372189 TCEAL9Q9UHQ7 104 aa16.05■□□□□ 0.16
RAPGEF1-201ENST00000372189 PSMD1Q99460 953 aa16.05■□□□□ 0.16
RAPGEF1-201ENST00000372189 FAM13BQ9NYF5 915 aa16.05■□□□□ 0.16
RAPGEF1-201ENST00000372189 PPP1R1BQ9UD71 204 aaPredicted RBP16.05■□□□□ 0.16
RAPGEF1-201ENST00000372189 ERICH2A1L162 156 aa16.05■□□□□ 0.16
RAPGEF1-201ENST00000372189 TRIM29Q14134 588 aa16.04■□□□□ 0.16
RAPGEF1-201ENST00000372189 CWC22Q9HCG8 908 aaKnown RBP16.04■□□□□ 0.16
RAPGEF1-201ENST00000372189 SSR1P43307 286 aaKnown RBP16.04■□□□□ 0.16
RAPGEF1-201ENST00000372189 AAMPQ13685 434 aa16.04■□□□□ 0.16
RAPGEF1-201ENST00000372189 CREBRFQ8IUR6 639 aa16.04■□□□□ 0.16
RAPGEF1-201ENST00000372189 HDGFL1Q5TGJ6 251 aa16.03■□□□□ 0.16
RAPGEF1-201ENST00000372189 MAP3K1Q13233 1512 aa16.03■□□□□ 0.16
RAPGEF1-201ENST00000372189 IDI1Q13907 227 aa16.03■□□□□ 0.16
RAPGEF1-201ENST00000372189 WASHC4Q2M389 1173 aa16.03■□□□□ 0.16
RAPGEF1-201ENST00000372189 DHX29Q7Z478 1369 aaKnown RBP16.03■□□□□ 0.16
RAPGEF1-201ENST00000372189 NUCB2P80303 420 aa16.03■□□□□ 0.16
RAPGEF1-201ENST00000372189 EXOSC9Q06265 439 aaKnown RBP16.03■□□□□ 0.16
RAPGEF1-201ENST00000372189 RAPGEF6Q8TEU7 1601 aa16.03■□□□□ 0.16
RAPGEF1-201ENST00000372189 BRD2P25440 801 aaKnown RBP16.03■□□□□ 0.16
RAPGEF1-201ENST00000372189 NFXL1Q6ZNB6 911 aa16.03■□□□□ 0.16
RAPGEF1-201ENST00000372189 DYDC1Q8WWB3 177 aa16.02■□□□□ 0.16
RAPGEF1-201ENST00000372189 PANK1Q8TE04 598 aa16.02■□□□□ 0.16
RAPGEF1-201ENST00000372189 MRE11P49959 708 aa16.02■□□□□ 0.15
RAPGEF1-201ENST00000372189 HSP90AB3PQ58FF7 597 aa16.02■□□□□ 0.15
RAPGEF1-201ENST00000372189 CPLX1O14810 134 aa16.02■□□□□ 0.15
RAPGEF1-201ENST00000372189 HMGB2P26583 209 aaKnown RBP16.02■□□□□ 0.15
RAPGEF1-201ENST00000372189 FOXD4L6Q3SYB3 417 aaPredicted RBP16.02■□□□□ 0.15
RAPGEF1-201ENST00000372189 FOXD4L3Q6VB84 417 aaPredicted RBP16.02■□□□□ 0.15
RAPGEF1-201ENST00000372189 AEBP1Q8IUX7 1158 aa16.02■□□□□ 0.15
RAPGEF1-201ENST00000372189 CWC15Q9P013 229 aaKnown RBP16.02■□□□□ 0.15
RAPGEF1-201ENST00000372189 NSD3Q9BZ95 1437 aa16.01■□□□□ 0.15
RAPGEF1-201ENST00000372189 FYB1O15117 783 aa16.01■□□□□ 0.15
RAPGEF1-201ENST00000372189 ZNF592Q92610 1267 aa16.01■□□□□ 0.15
RAPGEF1-201ENST00000372189 PHF8Q9UPP1 1060 aa16.01■□□□□ 0.15
RAPGEF1-201ENST00000372189 TSR1Q2NL82 804 aaKnown RBP16.01■□□□□ 0.15
RAPGEF1-201ENST00000372189 TPM1P09493 284 aa16.01■□□□□ 0.15
RAPGEF1-201ENST00000372189 TPD52L1Q16890 204 aaPredicted RBP16.01■□□□□ 0.15
RAPGEF1-201ENST00000372189 WWC1Q8IX03 1113 aa16.01■□□□□ 0.15
RAPGEF1-201ENST00000372189 CCAR2Q8N163 923 aaKnown RBP16■□□□□ 0.15
RAPGEF1-201ENST00000372189 LRPPRCP42704 1394 aaKnown RBP16■□□□□ 0.15
RAPGEF1-201ENST00000372189 TNRQ92752 1358 aa16■□□□□ 0.15
RAPGEF1-201ENST00000372189 BTBD11A6QL63 1104 aa16■□□□□ 0.15
RAPGEF1-201ENST00000372189 INTS3Q68E01 1043 aaKnown RBP16■□□□□ 0.15
RAPGEF1-201ENST00000372189 MCTP1Q6DN14 999 aa16■□□□□ 0.15
RAPGEF1-201ENST00000372189 SLC4A2P04920 1241 aa16■□□□□ 0.15
RAPGEF1-201ENST00000372189 MTERF4Q7Z6M4 381 aaKnown RBP16■□□□□ 0.15
RAPGEF1-201ENST00000372189 CNNM1Q9NRU3 951 aa15.99■□□□□ 0.15
RAPGEF1-201ENST00000372189 TBC1D2BQ9UPU7 963 aa15.99■□□□□ 0.15
RAPGEF1-201ENST00000372189 CCDC70Q6NSX1 233 aa15.99■□□□□ 0.15
RAPGEF1-201ENST00000372189 CCDC191Q8NCU4 936 aa15.99■□□□□ 0.15
RAPGEF1-201ENST00000372189 NINLQ9Y2I6 1382 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms