RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 SSH2Q76I76 1423 aa24.88■■□□□ 1.57
VEGFA-206ENST00000372077 C1orf167Q5SNV9 1468 aa24.88■■□□□ 1.57
VEGFA-206ENST00000372077 AEBP2Q6ZN18 517 aaPredicted RBP24.88■■□□□ 1.57
VEGFA-206ENST00000372077 MST1RQ04912 1400 aa24.88■■□□□ 1.57
VEGFA-206ENST00000372077 CADPS2Q86UW7 1296 aa24.87■■□□□ 1.57
VEGFA-206ENST00000372077 NGDNQ8NEJ9 315 aaKnown RBP24.87■■□□□ 1.57
VEGFA-206ENST00000372077 KIF20BQ96Q89 1820 aa24.87■■□□□ 1.57
VEGFA-206ENST00000372077 NLRP13Q86W25 1043 aa24.87■■□□□ 1.57
VEGFA-206ENST00000372077 BRD4O60885 1362 aaPredicted RBP24.86■■□□□ 1.57
VEGFA-206ENST00000372077 ANKRD26Q9UPS8 1709 aa24.86■■□□□ 1.57
VEGFA-206ENST00000372077 PPP2R1AP30153 589 aa24.85■■□□□ 1.57
VEGFA-206ENST00000372077 MORC1Q86VD1 984 aa24.85■■□□□ 1.57
VEGFA-206ENST00000372077 ESCO1Q5FWF5 840 aa24.85■■□□□ 1.57
VEGFA-206ENST00000372077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.85■■□□□ 1.57
VEGFA-206ENST00000372077 HNRNPUQ00839 825 aaKnown RBP eCLIP24.85■■□□□ 1.578e-7■□□□□ 10.9
VEGFA-206ENST00000372077 MRS2Q9HD23 443 aa24.85■■□□□ 1.57
VEGFA-206ENST00000372077 TTC21BQ7Z4L5 1316 aa24.84■■□□□ 1.57
VEGFA-206ENST00000372077 GGNBP2Q9H3C7 697 aa24.84■■□□□ 1.57
VEGFA-206ENST00000372077 LTBP4Q8N2S1 1624 aa24.84■■□□□ 1.57
VEGFA-206ENST00000372077 ORAI2Q96SN7 254 aa24.83■■□□□ 1.57
VEGFA-206ENST00000372077 KIF1AQ12756 1690 aa24.8■■□□□ 1.56
VEGFA-206ENST00000372077 TTC21AQ8NDW8 1320 aa24.8■■□□□ 1.56
VEGFA-206ENST00000372077 NEFLP07196 543 aa24.8■■□□□ 1.56
VEGFA-206ENST00000372077 NME9Q86XW9 330 aa24.8■■□□□ 1.56
VEGFA-206ENST00000372077 ZRANB1Q9UGI0 708 aa24.75■■□□□ 1.55
VEGFA-206ENST00000372077 FAM9BQ8IZU0 186 aa24.74■■□□□ 1.55
VEGFA-206ENST00000372077 PNISRQ8TF01 805 aaKnown RBP24.74■■□□□ 1.55
VEGFA-206ENST00000372077 OVOS2A0A0J9YW53 1432 aa24.73■■□□□ 1.55
VEGFA-206ENST00000372077 OVOS2Q6IE36 1432 aa24.73■■□□□ 1.55
VEGFA-206ENST00000372077 USP31Q70CQ4 1352 aa24.73■■□□□ 1.55
VEGFA-206ENST00000372077 TNNT2P45379 298 aaPredicted RBP24.73■■□□□ 1.55
VEGFA-206ENST00000372077 PSME1Q06323 249 aa24.73■■□□□ 1.55
VEGFA-206ENST00000372077 COG3Q96JB2 828 aa24.73■■□□□ 1.55
VEGFA-206ENST00000372077 FOXO3O43524 673 aa24.72■■□□□ 1.55
VEGFA-206ENST00000372077 SLAIN2Q9P270 581 aa24.71■■□□□ 1.55
VEGFA-206ENST00000372077 PIK3C2AO00443 1686 aa24.71■■□□□ 1.55
VEGFA-206ENST00000372077 PRKCSHP14314 528 aaPredicted RBP24.7■■□□□ 1.54
VEGFA-206ENST00000372077 USP54Q70EL1 1684 aa24.69■■□□□ 1.54
VEGFA-206ENST00000372077 AATKQ6ZMQ8 1374 aa24.68■■□□□ 1.54
VEGFA-206ENST00000372077 TRPM3Q9HCF6 1732 aaPredicted RBP24.68■■□□□ 1.54
VEGFA-206ENST00000372077 MTHFSP49914 203 aa24.67■■□□□ 1.54
VEGFA-206ENST00000372077 BRINP3Q76B58 766 aa24.67■■□□□ 1.54
VEGFA-206ENST00000372077 KRT28Q7Z3Y7 464 aa24.67■■□□□ 1.54
VEGFA-206ENST00000372077 PAK3O75914 559 aaPredicted RBP24.65■■□□□ 1.54
VEGFA-206ENST00000372077 NPHP3Q7Z494 1330 aa24.65■■□□□ 1.54
VEGFA-206ENST00000372077 ABTB2Q8N961 1025 aa24.64■■□□□ 1.54
VEGFA-206ENST00000372077 MARF1Q9Y4F3 1742 aaKnown RBP24.64■■□□□ 1.54
VEGFA-206ENST00000372077 NLRP6P59044 892 aa24.63■■□□□ 1.53
VEGFA-206ENST00000372077 XPCQ01831 940 aaPredicted RBP24.63■■□□□ 1.53
VEGFA-206ENST00000372077 POLKQ9UBT6 870 aa24.63■■□□□ 1.53
VEGFA-206ENST00000372077 SMG6Q86US8 1419 aaKnown RBP24.62■■□□□ 1.53
VEGFA-206ENST00000372077 MAP2P11137 1827 aaKnown RBP24.62■■□□□ 1.53
VEGFA-206ENST00000372077 FBLN1P23142 703 aa24.62■■□□□ 1.53
VEGFA-206ENST00000372077 SBNO1A3KN83 1393 aa24.61■■□□□ 1.53
VEGFA-206ENST00000372077 PXDNQ92626 1479 aa24.61■■□□□ 1.53
VEGFA-206ENST00000372077 DDX17Q92841 729 aaKnown RBP24.6■■□□□ 1.53
VEGFA-206ENST00000372077 INSRP06213 1382 aa24.6■■□□□ 1.53
VEGFA-206ENST00000372077 PNPLA6Q8IY17 1366 aa24.6■■□□□ 1.53
VEGFA-206ENST00000372077 CFAP53Q96M91 514 aa24.6■■□□□ 1.53
VEGFA-206ENST00000372077 ALS2Q96Q42 1657 aa24.59■■□□□ 1.53
VEGFA-206ENST00000372077 NUTM2GQ5VZR2 741 aa24.57■■□□□ 1.52
VEGFA-206ENST00000372077 COL3A1P02461 1466 aaPredicted RBP24.57■■□□□ 1.52
VEGFA-206ENST00000372077 SHPRHQ149N8 1683 aa24.56■■□□□ 1.52
VEGFA-206ENST00000372077 EMILIN1Q9Y6C2 1016 aa24.56■■□□□ 1.52
VEGFA-206ENST00000372077 SOS2Q07890 1332 aaPredicted RBP24.56■■□□□ 1.52
VEGFA-206ENST00000372077 RRS1Q15050 365 aaKnown RBP24.55■■□□□ 1.52
VEGFA-206ENST00000372077 NHSL1Q5SYE7 1610 aa24.55■■□□□ 1.52
VEGFA-206ENST00000372077 CDK12Q9NYV4 1490 aaPredicted RBP24.54■■□□□ 1.52
VEGFA-206ENST00000372077 WDR43Q15061 677 aaKnown RBP eCLIP24.54■■□□□ 1.528e-10■□□□□ 9.2
VEGFA-206ENST00000372077 ADAMTS8Q9UP79 889 aa24.53■■□□□ 1.52
VEGFA-206ENST00000372077 TNS3Q68CZ2 1445 aa24.53■■□□□ 1.52
VEGFA-206ENST00000372077 SPATA31A3Q5VYP0 1347 aa24.53■■□□□ 1.52
VEGFA-206ENST00000372077 USP19O94966 1318 aa24.52■■□□□ 1.52
VEGFA-206ENST00000372077 SLIT3O75094 1523 aa24.52■■□□□ 1.52
VEGFA-206ENST00000372077 IQSEC2Q5JU85 1478 aa24.52■■□□□ 1.52
VEGFA-206ENST00000372077 RBM19Q9Y4C8 960 aaKnown RBP24.52■■□□□ 1.52
VEGFA-206ENST00000372077 ANP32EQ9BTT0 268 aa24.5■■□□□ 1.51
VEGFA-206ENST00000372077 NFAT5O94916 1531 aa24.5■■□□□ 1.51
VEGFA-206ENST00000372077 BLMP54132 1417 aaPredicted RBP24.5■■□□□ 1.51
VEGFA-206ENST00000372077 MAP3K19Q56UN5 1328 aa24.5■■□□□ 1.51
VEGFA-206ENST00000372077 ROBO1Q9Y6N7 1651 aa24.5■■□□□ 1.51
VEGFA-206ENST00000372077 PPM1GO15355 546 aaPredicted RBP24.5■■□□□ 1.51
VEGFA-206ENST00000372077 KCNH5Q8NCM2 988 aa24.5■■□□□ 1.51
VEGFA-206ENST00000372077 PEAK1Q9H792 1746 aa24.5■■□□□ 1.51
VEGFA-206ENST00000372077 LMOD2Q6P5Q4 547 aa24.49■■□□□ 1.51
VEGFA-206ENST00000372077 SOX12O15370 315 aa24.48■■□□□ 1.51
VEGFA-206ENST00000372077 DIAPH1O60610 1272 aaKnown RBP24.48■■□□□ 1.51
VEGFA-206ENST00000372077 ARHGEF10O15013 1369 aa24.48■■□□□ 1.51
VEGFA-206ENST00000372077 KIF24Q5T7B8 1368 aa24.47■■□□□ 1.51
VEGFA-206ENST00000372077 MED1Q15648 1581 aaPredicted RBP24.47■■□□□ 1.51
VEGFA-206ENST00000372077 TOM1O60784 492 aa24.47■■□□□ 1.51
VEGFA-206ENST00000372077 NUDCQ9Y266 331 aa24.46■■□□□ 1.51
VEGFA-206ENST00000372077 GCP02774 474 aa24.46■■□□□ 1.51
VEGFA-206ENST00000372077 AHDC1Q5TGY3 1603 aaPredicted RBP24.46■■□□□ 1.51
VEGFA-206ENST00000372077 FLT4P35916 1363 aa24.44■■□□□ 1.5
VEGFA-206ENST00000372077 IL13P35225 146 aa24.44■■□□□ 1.5
VEGFA-206ENST00000372077 CRYBG1Q9Y4K1 1723 aa24.43■■□□□ 1.5
VEGFA-206ENST00000372077 PHRF1Q9P1Y6 1649 aaKnown RBP24.42■■□□□ 1.5
VEGFA-206ENST00000372077 AMPHP49418 695 aa24.41■■□□□ 1.5
VEGFA-206ENST00000372077 CERKQ8TCT0 537 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms