RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 FBLN1P23142 703 aa24.44■■□□□ 1.5
CCDC17-201ENST00000372044 PIK3C2AO00443 1686 aa24.44■■□□□ 1.5
CCDC17-201ENST00000372044 TMEM94Q12767 1356 aa24.43■■□□□ 1.5
CCDC17-201ENST00000372044 TTC21BQ7Z4L5 1316 aa24.43■■□□□ 1.5
CCDC17-201ENST00000372044 MARF1Q9Y4F3 1742 aaKnown RBP24.43■■□□□ 1.5
CCDC17-201ENST00000372044 ADAMTS8Q9UP79 889 aa24.42■■□□□ 1.5
CCDC17-201ENST00000372044 BLMP54132 1417 aaPredicted RBP24.42■■□□□ 1.5
CCDC17-201ENST00000372044 NGDNQ8NEJ9 315 aaKnown RBP24.41■■□□□ 1.5
CCDC17-201ENST00000372044 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
CCDC17-201ENST00000372044 ZBED9Q6R2W3 1325 aa24.39■■□□□ 1.5
CCDC17-201ENST00000372044 ZNF335Q9H4Z2 1342 aaPredicted RBP24.39■■□□□ 1.49
CCDC17-201ENST00000372044 COL3A1P02461 1466 aaPredicted RBP24.38■■□□□ 1.49
CCDC17-201ENST00000372044 PHF8Q9UPP1 1060 aa24.37■■□□□ 1.49
CCDC17-201ENST00000372044 OVOS2A0A0J9YW53 1432 aa24.37■■□□□ 1.49
CCDC17-201ENST00000372044 OVOS2Q6IE36 1432 aa24.37■■□□□ 1.49
CCDC17-201ENST00000372044 WDR43Q15061 677 aaKnown RBP eCLIP24.36■■□□□ 1.49
CCDC17-201ENST00000372044 C19orf44Q9H6X5 657 aa24.36■■□□□ 1.49
CCDC17-201ENST00000372044 ESCO1Q5FWF5 840 aa24.35■■□□□ 1.49
CCDC17-201ENST00000372044 ORAI2Q96SN7 254 aa24.35■■□□□ 1.49
CCDC17-201ENST00000372044 LRRC7Q96NW7 1537 aa24.35■■□□□ 1.49
CCDC17-201ENST00000372044 INSRP06213 1382 aa24.35■■□□□ 1.49
CCDC17-201ENST00000372044 USP54Q70EL1 1684 aa24.34■■□□□ 1.49
CCDC17-201ENST00000372044 COG3Q96JB2 828 aa24.34■■□□□ 1.49
CCDC17-201ENST00000372044 C1orf167Q5SNV9 1468 aa24.33■■□□□ 1.49
CCDC17-201ENST00000372044 NCOA3Q9Y6Q9 1424 aa24.32■■□□□ 1.48
CCDC17-201ENST00000372044 KIF1AQ12756 1690 aa24.32■■□□□ 1.48
CCDC17-201ENST00000372044 MST1RQ04912 1400 aa24.32■■□□□ 1.48
CCDC17-201ENST00000372044 POLKQ9UBT6 870 aa24.32■■□□□ 1.48
CCDC17-201ENST00000372044 TTC21AQ8NDW8 1320 aa24.32■■□□□ 1.48
CCDC17-201ENST00000372044 SCAF1Q9H7N4 1312 aaKnown RBP24.32■■□□□ 1.48
CCDC17-201ENST00000372044 DCCP43146 1447 aa24.31■■□□□ 1.48
CCDC17-201ENST00000372044 PEAK1Q9H792 1746 aa24.3■■□□□ 1.48
CCDC17-201ENST00000372044 TRPM3Q9HCF6 1732 aaPredicted RBP24.3■■□□□ 1.48
CCDC17-201ENST00000372044 SALL2Q9Y467 1007 aaPredicted RBP24.3■■□□□ 1.48
CCDC17-201ENST00000372044 EMILIN1Q9Y6C2 1016 aa24.3■■□□□ 1.48
CCDC17-201ENST00000372044 CFAP53Q96M91 514 aa24.29■■□□□ 1.48
CCDC17-201ENST00000372044 AATKQ6ZMQ8 1374 aa24.29■■□□□ 1.48
CCDC17-201ENST00000372044 PNPLA6Q8IY17 1366 aa24.29■■□□□ 1.48
CCDC17-201ENST00000372044 SMG6Q86US8 1419 aaKnown RBP24.29■■□□□ 1.48
CCDC17-201ENST00000372044 RRS1Q15050 365 aaKnown RBP24.28■■□□□ 1.48
CCDC17-201ENST00000372044 CCDC146Q8IYE0 955 aa24.28■■□□□ 1.48
CCDC17-201ENST00000372044 PPM1GO15355 546 aaPredicted RBP24.26■■□□□ 1.47
CCDC17-201ENST00000372044 ATF3P18847 181 aa24.26■■□□□ 1.47
CCDC17-201ENST00000372044 USP31Q70CQ4 1352 aa24.26■■□□□ 1.47
CCDC17-201ENST00000372044 MSH6P52701 1360 aa24.25■■□□□ 1.47
CCDC17-201ENST00000372044 FOXO3O43524 673 aa24.25■■□□□ 1.47
CCDC17-201ENST00000372044 NUTM2GQ5VZR2 741 aa24.25■■□□□ 1.47
CCDC17-201ENST00000372044 CDK12Q9NYV4 1490 aaPredicted RBP24.25■■□□□ 1.47
CCDC17-201ENST00000372044 PAK3O75914 559 aaPredicted RBP24.24■■□□□ 1.47
CCDC17-201ENST00000372044 XPCQ01831 940 aaPredicted RBP24.24■■□□□ 1.47
CCDC17-201ENST00000372044 LTN1O94822 1766 aa24.23■■□□□ 1.47
CCDC17-201ENST00000372044 SOX12O15370 315 aa24.23■■□□□ 1.47
CCDC17-201ENST00000372044 PSME1Q06323 249 aa24.22■■□□□ 1.47
CCDC17-201ENST00000372044 NLRP6P59044 892 aa24.21■■□□□ 1.47
CCDC17-201ENST00000372044 ABTB2Q8N961 1025 aa24.21■■□□□ 1.47
CCDC17-201ENST00000372044 ALS2Q96Q42 1657 aa24.2■■□□□ 1.47
CCDC17-201ENST00000372044 CADPS2Q86UW7 1296 aa24.2■■□□□ 1.46
CCDC17-201ENST00000372044 GTF3C3Q9Y5Q9 886 aa24.2■■□□□ 1.46
CCDC17-201ENST00000372044 DMRT2Q9Y5R5 561 aa24.19■■□□□ 1.46
CCDC17-201ENST00000372044 DIAPH1O60610 1272 aaKnown RBP24.19■■□□□ 1.46
CCDC17-201ENST00000372044 DDX17Q92841 729 aaKnown RBP24.19■■□□□ 1.46
CCDC17-201ENST00000372044 U2AF1L5P0DN76 240 aaPredicted RBP24.18■■□□□ 1.46
CCDC17-201ENST00000372044 U2AF1Q01081 240 aaKnown RBP eCLIP24.18■■□□□ 1.46
CCDC17-201ENST00000372044 IQSEC2Q5JU85 1478 aa24.18■■□□□ 1.46
CCDC17-201ENST00000372044 APAF1O14727 1248 aa24.17■■□□□ 1.46
CCDC17-201ENST00000372044 U2SURPO15042 1029 aaKnown RBP24.17■■□□□ 1.46
CCDC17-201ENST00000372044 MAP3K19Q56UN5 1328 aa24.15■■□□□ 1.46
CCDC17-201ENST00000372044 KRT28Q7Z3Y7 464 aa24.14■■□□□ 1.45
CCDC17-201ENST00000372044 RGPD1P0DJD0 1748 aa24.14■■□□□ 1.45
CCDC17-201ENST00000372044 NFAT5O94916 1531 aa24.13■■□□□ 1.45
CCDC17-201ENST00000372044 NUDCQ9Y266 331 aa24.13■■□□□ 1.45
CCDC17-201ENST00000372044 IL13P35225 146 aa24.13■■□□□ 1.45
CCDC17-201ENST00000372044 CDCA7LQ96GN5 454 aa24.13■■□□□ 1.45
CCDC17-201ENST00000372044 RUNDC1Q96C34 613 aa24.12■■□□□ 1.45
CCDC17-201ENST00000372044 LTBP4Q8N2S1 1624 aa24.11■■□□□ 1.45
CCDC17-201ENST00000372044 ZNF521Q96K83 1311 aa24.11■■□□□ 1.45
CCDC17-201ENST00000372044 PXDNQ92626 1479 aa24.1■■□□□ 1.45
CCDC17-201ENST00000372044 HSP90AB2PQ58FF8 381 aa24.1■■□□□ 1.45
CCDC17-201ENST00000372044 PLEKHF1Q96S99 279 aa24.1■■□□□ 1.45
CCDC17-201ENST00000372044 DLG5Q8TDM6 1919 aa24.09■■□□□ 1.45
CCDC17-201ENST00000372044 SLIT3O75094 1523 aa24.09■■□□□ 1.45
CCDC17-201ENST00000372044 BRINP3Q76B58 766 aa24.09■■□□□ 1.45
CCDC17-201ENST00000372044 TCP11L2Q8N4U5 519 aa24.09■■□□□ 1.45
CCDC17-201ENST00000372044 RRP7AQ9Y3A4 280 aaKnown RBP24.09■■□□□ 1.45
CCDC17-201ENST00000372044 RGPD5Q99666 1765 aa24.08■■□□□ 1.44
CCDC17-201ENST00000372044 CRYBG1Q9Y4K1 1723 aa24.08■■□□□ 1.44
CCDC17-201ENST00000372044 SBNO1A3KN83 1393 aa24.07■■□□□ 1.44
CCDC17-201ENST00000372044 EIF4A2Q14240 407 aaKnown RBP24.07■■□□□ 1.44
CCDC17-201ENST00000372044 MED1Q15648 1581 aaPredicted RBP24.07■■□□□ 1.44
CCDC17-201ENST00000372044 PLEKHG5O94827 1062 aa24.07■■□□□ 1.44
CCDC17-201ENST00000372044 LMOD2Q6P5Q4 547 aa24.07■■□□□ 1.44
CCDC17-201ENST00000372044 SLAIN2Q9P270 581 aa24.07■■□□□ 1.44
CCDC17-201ENST00000372044 RGPD2P0DJD1 1756 aa24.06■■□□□ 1.44
CCDC17-201ENST00000372044 HMOX1P09601 288 aa24.06■■□□□ 1.44
CCDC17-201ENST00000372044 PHRF1Q9P1Y6 1649 aaKnown RBP24.06■■□□□ 1.44
CCDC17-201ENST00000372044 FLT4P35916 1363 aa24.06■■□□□ 1.44
CCDC17-201ENST00000372044 NEUROD2Q15784 382 aa24.05■■□□□ 1.44
CCDC17-201ENST00000372044 RSPH6AQ9H0K4 717 aa24.05■■□□□ 1.44
CCDC17-201ENST00000372044 NHSL1Q5SYE7 1610 aa24.04■■□□□ 1.44
CCDC17-201ENST00000372044 NPHP3Q7Z494 1330 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms