RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ATAD2Q6PL18 1390 aa15.18■□□□□ 0.02
TSPAN1-201ENST00000372003 PSME1Q06323 249 aa15.18■□□□□ 0.02
TSPAN1-201ENST00000372003 SLC12A5Q9H2X9 1139 aa15.18■□□□□ 0.02
TSPAN1-201ENST00000372003 HSPA1LP34931 641 aa15.17■□□□□ 0.02
TSPAN1-201ENST00000372003 PUS7Q96PZ0 661 aaKnown RBP15.17■□□□□ 0.02
TSPAN1-201ENST00000372003 ACEP12821 1306 aa15.17■□□□□ 0.02
TSPAN1-201ENST00000372003 PLEKHG3A1L390 1219 aa15.17■□□□□ 0.02
TSPAN1-201ENST00000372003 USP32Q8NFA0 1604 aa15.16■□□□□ 0.02
TSPAN1-201ENST00000372003 KRT28Q7Z3Y7 464 aa15.16■□□□□ 0.02
TSPAN1-201ENST00000372003 ROBO1Q9Y6N7 1651 aa15.16■□□□□ 0.02
TSPAN1-201ENST00000372003 BRD4O60885 1362 aaPredicted RBP15.15■□□□□ 0.02
TSPAN1-201ENST00000372003 NPHP3Q7Z494 1330 aa15.15■□□□□ 0.02
TSPAN1-201ENST00000372003 PNISRQ8TF01 805 aaKnown RBP15.15■□□□□ 0.02
TSPAN1-201ENST00000372003 ILDR1Q86SU0 546 aaPredicted RBP15.14■□□□□ 0.01
TSPAN1-201ENST00000372003 INSRP06213 1382 aa15.14■□□□□ 0.01
TSPAN1-201ENST00000372003 ZBTB47Q9UFB7 747 aaPredicted RBP15.14■□□□□ 0.01
TSPAN1-201ENST00000372003 PAK3O75914 559 aaPredicted RBP15.13■□□□□ 0.01
TSPAN1-201ENST00000372003 RALBP1Q15311 655 aa15.13■□□□□ 0.01
TSPAN1-201ENST00000372003 RGPD8O14715 1765 aaPredicted RBP15.12■□□□□ 0.01
TSPAN1-201ENST00000372003 TCERG1O14776 1098 aaKnown RBP15.12■□□□□ 0.01
TSPAN1-201ENST00000372003 LMOD2Q6P5Q4 547 aa15.12■□□□□ 0.01
TSPAN1-201ENST00000372003 HDGFL2Q7Z4V5 671 aaPredicted RBP15.12■□□□□ 0.01
TSPAN1-201ENST00000372003 SOS2Q07890 1332 aaPredicted RBP15.12■□□□□ 0.01
TSPAN1-201ENST00000372003 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
TSPAN1-201ENST00000372003 PDE3BQ13370 1112 aa15.11■□□□□ 0.01
TSPAN1-201ENST00000372003 TERF2IPQ9NYB0 399 aa15.11■□□□□ 0.01
TSPAN1-201ENST00000372003 POLR3AO14802 1390 aaPredicted RBP15.1■□□□□ 0.01
TSPAN1-201ENST00000372003 RTL5Q5HYW3 569 aaPredicted RBP15.1■□□□□ 0.01
TSPAN1-201ENST00000372003 LRRC59Q96AG4 307 aaKnown RBP15.1■□□□□ 0.01
TSPAN1-201ENST00000372003 ZNF692Q9BU19 519 aaPredicted RBP15.1■□□□□ 0.01
TSPAN1-201ENST00000372003 MS4A1P11836 297 aa15.1■□□□□ 0.01
TSPAN1-201ENST00000372003 USP35Q9P2H5 1018 aa15.1■□□□□ 0.01
TSPAN1-201ENST00000372003 MYBBP1AQ9BQG0 1328 aaKnown RBP15.09■□□□□ 0.01
TSPAN1-201ENST00000372003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.08■□□□□ 0
TSPAN1-201ENST00000372003 A0A1W2PP64 1363 aa15.07■□□□□ 0
TSPAN1-201ENST00000372003 NINLQ9Y2I6 1382 aa15.07■□□□□ 0
TSPAN1-201ENST00000372003 NUTM2GQ5VZR2 741 aa15.07■□□□□ 0
TSPAN1-201ENST00000372003 PANK3Q9H999 370 aa15.07■□□□□ 0
TSPAN1-201ENST00000372003 KIF1AQ12756 1690 aa15.07■□□□□ 0
TSPAN1-201ENST00000372003 TOPAZ1Q8N9V7 1692 aa15.07■□□□□ 0
TSPAN1-201ENST00000372003 CPSF1Q10570 1443 aaKnown RBP15.07■□□□□ 0
TSPAN1-201ENST00000372003 AHDC1Q5TGY3 1603 aaPredicted RBP15.06■□□□□ 0
TSPAN1-201ENST00000372003 PXDNQ92626 1479 aa15.06■□□□□ 0
TSPAN1-201ENST00000372003 SPATA31A3Q5VYP0 1347 aa15.06■□□□□ 0
TSPAN1-201ENST00000372003 USP6P35125 1406 aa15.06■□□□□ 0
TSPAN1-201ENST00000372003 ABTB2Q8N961 1025 aa15.06■□□□□ 0
TSPAN1-201ENST00000372003 CD163L1Q9NR16 1453 aa15.06■□□□□ 0
TSPAN1-201ENST00000372003 ITSN1Q15811 1721 aa15.06■□□□□ 0
TSPAN1-201ENST00000372003 ANKRD36BQ8N2N9 1353 aa15.05■□□□□ 0
TSPAN1-201ENST00000372003 PHLPP1O60346 1717 aa15.05■□□□□ -0
TSPAN1-201ENST00000372003 RRP1P56182 461 aaKnown RBP15.05■□□□□ -0
TSPAN1-201ENST00000372003 CARD14Q9BXL6 1004 aa15.05■□□□□ -0
TSPAN1-201ENST00000372003 TTC21BQ7Z4L5 1316 aa15.05■□□□□ -0
TSPAN1-201ENST00000372003 NHSL1Q5SYE7 1610 aa15.04■□□□□ -0
TSPAN1-201ENST00000372003 SBNO1A3KN83 1393 aa15.04■□□□□ -0
TSPAN1-201ENST00000372003 NUTM2BA6NNL0 878 aaPredicted RBP15.03■□□□□ -0
TSPAN1-201ENST00000372003 NUTM2EB1AL46 878 aaPredicted RBP15.03■□□□□ -0
TSPAN1-201ENST00000372003 NBR1Q14596 966 aa15.03■□□□□ -0
TSPAN1-201ENST00000372003 NUTM2AQ8IVF1 878 aaPredicted RBP15.03■□□□□ -0
TSPAN1-201ENST00000372003 CABLES1Q8TDN4 633 aa15.03■□□□□ -0
TSPAN1-201ENST00000372003 JCADQ9P266 1359 aa15.02■□□□□ -0
TSPAN1-201ENST00000372003 TNS3Q68CZ2 1445 aa15.02■□□□□ -0
TSPAN1-201ENST00000372003 COL16A1Q07092 1604 aaPredicted RBP15.02■□□□□ -0
TSPAN1-201ENST00000372003 NLRP6P59044 892 aa15.02□□□□□ -0.01
TSPAN1-201ENST00000372003 NME9Q86XW9 330 aa15.02□□□□□ -0.01
TSPAN1-201ENST00000372003 ZRANB1Q9UGI0 708 aa15.02□□□□□ -0.01
TSPAN1-201ENST00000372003 PNPLA6Q8IY17 1366 aa15.01□□□□□ -0.01
TSPAN1-201ENST00000372003 SSH2Q76I76 1423 aa15□□□□□ -0.01
TSPAN1-201ENST00000372003 HAP1P54257 671 aaPredicted RBP15□□□□□ -0.01
TSPAN1-201ENST00000372003 EDC4Q6P2E9 1401 aaKnown RBP15□□□□□ -0.01
TSPAN1-201ENST00000372003 NSD3Q9BZ95 1437 aa15□□□□□ -0.01
TSPAN1-201ENST00000372003 ARHGEF10O15013 1369 aa14.99□□□□□ -0.01
TSPAN1-201ENST00000372003 PARD3Q8TEW0 1356 aa14.99□□□□□ -0.01
TSPAN1-201ENST00000372003 TTC21AQ8NDW8 1320 aa14.99□□□□□ -0.01
TSPAN1-201ENST00000372003 PPM1GO15355 546 aaPredicted RBP14.99□□□□□ -0.01
TSPAN1-201ENST00000372003 CNGB1Q14028 1251 aaPredicted RBP14.99□□□□□ -0.01
TSPAN1-201ENST00000372003 NLRP13Q86W25 1043 aa14.99□□□□□ -0.01
TSPAN1-201ENST00000372003 RCAN3Q9UKA8 241 aa14.99□□□□□ -0.01
TSPAN1-201ENST00000372003 GGNBP2Q9H3C7 697 aa14.99□□□□□ -0.01
TSPAN1-201ENST00000372003 KNSTRNQ9Y448 316 aa14.99□□□□□ -0.01
TSPAN1-201ENST00000372003 MYOM1P52179 1685 aa14.98□□□□□ -0.01
TSPAN1-201ENST00000372003 SOX12O15370 315 aa14.98□□□□□ -0.01
TSPAN1-201ENST00000372003 BACH2Q9BYV9 841 aa14.98□□□□□ -0.01
TSPAN1-201ENST00000372003 FYB1O15117 783 aa14.97□□□□□ -0.01
TSPAN1-201ENST00000372003 DDRGK1Q96HY6 314 aa14.97□□□□□ -0.01
TSPAN1-201ENST00000372003 ADAMTS2O95450 1211 aa14.96□□□□□ -0.01
TSPAN1-201ENST00000372003 PDE4AP27815 886 aa14.96□□□□□ -0.01
TSPAN1-201ENST00000372003 CGNL1Q0VF96 1302 aa14.96□□□□□ -0.02
TSPAN1-201ENST00000372003 SPATA31A6Q5VVP1 1343 aa14.96□□□□□ -0.02
TSPAN1-201ENST00000372003 TRPM3Q9HCF6 1732 aaPredicted RBP14.96□□□□□ -0.02
TSPAN1-201ENST00000372003 COG3Q96JB2 828 aa14.95□□□□□ -0.02
TSPAN1-201ENST00000372003 PER1O15534 1290 aaPredicted RBP14.95□□□□□ -0.02
TSPAN1-201ENST00000372003 AKAP12Q02952 1782 aa14.95□□□□□ -0.02
TSPAN1-201ENST00000372003 BLMP54132 1417 aaPredicted RBP14.95□□□□□ -0.02
TSPAN1-201ENST00000372003 ZBTB7CA1YPR0 619 aa14.94□□□□□ -0.02
TSPAN1-201ENST00000372003 ZC3H6P61129 1189 aaKnown RBP14.94□□□□□ -0.02
TSPAN1-201ENST00000372003 MEX3CQ5U5Q3 659 aaKnown RBP14.94□□□□□ -0.02
TSPAN1-201ENST00000372003 GCP02774 474 aa14.93□□□□□ -0.02
TSPAN1-201ENST00000372003 EXOC6Q8TAG9 804 aa14.93□□□□□ -0.02
TSPAN1-201ENST00000372003 MON2Q7Z3U7 1717 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 251.8 ms