RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.95■■□□□ 1.74
LHX3-202ENST00000371748 U2SURPO15042 1029 aaKnown RBP25.95■■□□□ 1.74
LHX3-202ENST00000371748 C20orf194Q5TEA3 1177 aa25.95■■□□□ 1.74
LHX3-202ENST00000371748 CRBNQ96SW2 442 aa25.95■■□□□ 1.74
LHX3-202ENST00000371748 ARHGAP23Q9P227 1491 aa25.95■■□□□ 1.74
LHX3-202ENST00000371748 CCDC61Q9Y6R9 512 aa25.93■■□□□ 1.74
LHX3-202ENST00000371748 FBLN1P23142 703 aa25.93■■□□□ 1.74
LHX3-202ENST00000371748 PTPRUQ92729 1446 aa25.93■■□□□ 1.74
LHX3-202ENST00000371748 CDC42BPGQ6DT37 1551 aa25.93■■□□□ 1.74
LHX3-202ENST00000371748 EDC4Q6P2E9 1401 aaKnown RBP25.92■■□□□ 1.74
LHX3-202ENST00000371748 PRR36Q9H6K5 1346 aa25.92■■□□□ 1.74
LHX3-202ENST00000371748 PHF23Q9BUL5 403 aaPredicted RBP25.91■■□□□ 1.74
LHX3-202ENST00000371748 MON2Q7Z3U7 1717 aa25.9■■□□□ 1.74
LHX3-202ENST00000371748 ITSN1Q15811 1721 aa25.9■■□□□ 1.74
LHX3-202ENST00000371748 MAP2P11137 1827 aaKnown RBP25.9■■□□□ 1.74
LHX3-202ENST00000371748 NME9Q86XW9 330 aa25.9■■□□□ 1.74
LHX3-202ENST00000371748 ADGRB2O60241 1585 aa25.9■■□□□ 1.74
LHX3-202ENST00000371748 THEMISQ8N1K5 641 aaPredicted RBP25.89■■□□□ 1.74
LHX3-202ENST00000371748 AKAP12Q02952 1782 aa25.89■■□□□ 1.74
LHX3-202ENST00000371748 PNPLA6Q8IY17 1366 aa25.88■■□□□ 1.73
LHX3-202ENST00000371748 DIAPH1O60610 1272 aaKnown RBP25.88■■□□□ 1.73
LHX3-202ENST00000371748 ZRANB1Q9UGI0 708 aa25.88■■□□□ 1.73
LHX3-202ENST00000371748 PPM1GO15355 546 aaPredicted RBP25.87■■□□□ 1.73
LHX3-202ENST00000371748 NUTM2FA1L443 756 aa25.87■■□□□ 1.73
LHX3-202ENST00000371748 POLKQ9UBT6 870 aa25.87■■□□□ 1.73
LHX3-202ENST00000371748 BCAR3O75815 825 aa25.86■■□□□ 1.73
LHX3-202ENST00000371748 CCDC27Q2M243 656 aa25.86■■□□□ 1.73
LHX3-202ENST00000371748 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.86■■□□□ 1.73
LHX3-202ENST00000371748 PLEKHF1Q96S99 279 aa25.86■■□□□ 1.73
LHX3-202ENST00000371748 AMOTL2Q9Y2J4 779 aa25.86■■□□□ 1.73
LHX3-202ENST00000371748 WDR63Q8IWG1 891 aa25.85■■□□□ 1.73
LHX3-202ENST00000371748 RIMS1Q86UR5 1692 aaKnown RBP25.85■■□□□ 1.73
LHX3-202ENST00000371748 TBX22Q9Y458 520 aa25.84■■□□□ 1.73
LHX3-202ENST00000371748 TOPAZ1Q8N9V7 1692 aa25.81■■□□□ 1.72
LHX3-202ENST00000371748 EMILIN1Q9Y6C2 1016 aa25.81■■□□□ 1.72
LHX3-202ENST00000371748 CEP170BQ9Y4F5 1589 aaPredicted RBP25.81■■□□□ 1.72
LHX3-202ENST00000371748 MAPK8IP3Q9UPT6 1336 aa25.8■■□□□ 1.72
LHX3-202ENST00000371748 ZNF692Q9BU19 519 aaPredicted RBP25.8■■□□□ 1.72
LHX3-202ENST00000371748 NCBP3Q53F19 620 aaKnown RBP25.8■■□□□ 1.72
LHX3-202ENST00000371748 COG3Q96JB2 828 aa25.8■■□□□ 1.72
LHX3-202ENST00000371748 TMPOP42166 694 aaKnown RBP25.79■■□□□ 1.72
LHX3-202ENST00000371748 DIP2AQ14689 1571 aa25.78■■□□□ 1.72
LHX3-202ENST00000371748 ACEP12821 1306 aa25.77■■□□□ 1.72
LHX3-202ENST00000371748 PTCH1Q13635 1447 aa25.77■■□□□ 1.72
LHX3-202ENST00000371748 LRRC7Q96NW7 1537 aa25.75■■□□□ 1.71
LHX3-202ENST00000371748 NRKQ7Z2Y5 1582 aa25.75■■□□□ 1.71
LHX3-202ENST00000371748 TRIM35Q9UPQ4 493 aa25.75■■□□□ 1.71
LHX3-202ENST00000371748 RRS1Q15050 365 aaKnown RBP25.74■■□□□ 1.71
LHX3-202ENST00000371748 AATKQ6ZMQ8 1374 aa25.74■■□□□ 1.71
LHX3-202ENST00000371748 PLEKHG3A1L390 1219 aa25.74■■□□□ 1.71
LHX3-202ENST00000371748 MYH16Q9H6N6 1097 aa25.73■■□□□ 1.71
LHX3-202ENST00000371748 XRN1Q8IZH2 1706 aaKnown RBP25.73■■□□□ 1.71
LHX3-202ENST00000371748 TTC21BQ7Z4L5 1316 aa25.73■■□□□ 1.71
LHX3-202ENST00000371748 CDK12Q9NYV4 1490 aaPredicted RBP25.72■■□□□ 1.71
LHX3-202ENST00000371748 FCHSD2O94868 740 aa25.72■■□□□ 1.71
LHX3-202ENST00000371748 PNNQ9H307 717 aaKnown RBP25.72■■□□□ 1.71
LHX3-202ENST00000371748 NOP58Q9Y2X3 529 aaKnown RBP25.72■■□□□ 1.71
LHX3-202ENST00000371748 RIPK4P57078 832 aa25.71■■□□□ 1.71
LHX3-202ENST00000371748 RSPH6AQ9H0K4 717 aa25.71■■□□□ 1.71
LHX3-202ENST00000371748 RGPD8O14715 1765 aaPredicted RBP25.71■■□□□ 1.71
LHX3-202ENST00000371748 PRKAR2BP31323 418 aa25.71■■□□□ 1.71
LHX3-202ENST00000371748 RARSP54136 660 aaKnown RBP25.7■■□□□ 1.71
LHX3-202ENST00000371748 HMOX1P09601 288 aa25.7■■□□□ 1.7
LHX3-202ENST00000371748 USP6P35125 1406 aa25.7■■□□□ 1.7
LHX3-202ENST00000371748 CANXP27824 592 aaKnown RBP25.69■■□□□ 1.7
LHX3-202ENST00000371748 IL13P35225 146 aa25.69■■□□□ 1.7
LHX3-202ENST00000371748 PMFBP1Q8TBY8 1022 aa25.69■■□□□ 1.7
LHX3-202ENST00000371748 TSR2Q969E8 191 aaKnown RBP25.69■■□□□ 1.7
LHX3-202ENST00000371748 KCNA6P17658 529 aa25.68■■□□□ 1.7
LHX3-202ENST00000371748 PAK3O75914 559 aaPredicted RBP25.67■■□□□ 1.7
LHX3-202ENST00000371748 ADAMTSL3P82987 1691 aa25.67■■□□□ 1.7
LHX3-202ENST00000371748 FRAT1Q92837 279 aaPredicted RBP25.67■■□□□ 1.7
LHX3-202ENST00000371748 BCL2L13Q9BXK5 485 aa25.66■■□□□ 1.7
LHX3-202ENST00000371748 OVOS2A0A0J9YW53 1432 aa25.64■■□□□ 1.7
LHX3-202ENST00000371748 OVOS2Q6IE36 1432 aa25.64■■□□□ 1.7
LHX3-202ENST00000371748 ZNF142P52746 1687 aaPredicted RBP25.64■■□□□ 1.7
LHX3-202ENST00000371748 PDE3AQ14432 1141 aa25.64■■□□□ 1.7
LHX3-202ENST00000371748 PHACTR3Q96KR7 559 aa25.64■■□□□ 1.7
LHX3-202ENST00000371748 NEFMP07197 916 aa25.63■■□□□ 1.69
LHX3-202ENST00000371748 PANK1Q8TE04 598 aa25.63■■□□□ 1.69
LHX3-202ENST00000371748 KDM2BQ8NHM5 1336 aa25.63■■□□□ 1.69
LHX3-202ENST00000371748 SKAP1Q86WV1 359 aa25.62■■□□□ 1.69
LHX3-202ENST00000371748 ANKLE2Q86XL3 938 aa25.62■■□□□ 1.69
LHX3-202ENST00000371748 PIK3R4Q99570 1358 aa25.62■■□□□ 1.69
LHX3-202ENST00000371748 SSH2Q76I76 1423 aa25.62■■□□□ 1.69
LHX3-202ENST00000371748 EXOSC9Q06265 439 aaKnown RBP25.61■■□□□ 1.69
LHX3-202ENST00000371748 NALCNQ8IZF0 1738 aa25.61■■□□□ 1.69
LHX3-202ENST00000371748 DEKP35659 375 aaKnown RBP25.61■■□□□ 1.69
LHX3-202ENST00000371748 IL16Q14005 1332 aa25.61■■□□□ 1.69
LHX3-202ENST00000371748 NGDNQ8NEJ9 315 aaKnown RBP25.6■■□□□ 1.69
LHX3-202ENST00000371748 COG6Q9Y2V7 657 aa25.6■■□□□ 1.69
LHX3-202ENST00000371748 TCERG1O14776 1098 aaKnown RBP25.6■■□□□ 1.69
LHX3-202ENST00000371748 SOX12O15370 315 aa25.59■■□□□ 1.69
LHX3-202ENST00000371748 TNNQ9UQP3 1299 aa25.59■■□□□ 1.69
LHX3-202ENST00000371748 CHD2O14647 1828 aaKnown RBP25.58■■□□□ 1.69
LHX3-202ENST00000371748 NFE2L2Q16236 605 aa25.58■■□□□ 1.69
LHX3-202ENST00000371748 CENPQQ7L2Z9 268 aaPredicted RBP25.58■■□□□ 1.69
LHX3-202ENST00000371748 SETD1BQ9UPS6 1966 aaKnown RBP25.58■■□□□ 1.69
LHX3-202ENST00000371748 IPO9Q96P70 1041 aaKnown RBP25.57■■□□□ 1.68
LHX3-202ENST00000371748 PEAK1Q9H792 1746 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms