RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 COL3A1P02461 1466 aaPredicted RBP31.16■■■□□ 2.58
LHX3-201ENST00000371746 NME9Q86XW9 330 aa31.16■■■□□ 2.58
LHX3-201ENST00000371746 TBX22Q9Y458 520 aa31.16■■■□□ 2.58
LHX3-201ENST00000371746 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.16■■■□□ 2.58
LHX3-201ENST00000371746 E9PSI1 815 aa31.15■■■□□ 2.58
LHX3-201ENST00000371746 ZRANB1Q9UGI0 708 aa31.13■■■□□ 2.57
LHX3-201ENST00000371746 CDC42BPGQ6DT37 1551 aa31.13■■■□□ 2.57
LHX3-201ENST00000371746 RIMS1Q86UR5 1692 aaKnown RBP31.12■■■□□ 2.57
LHX3-201ENST00000371746 PPM1GO15355 546 aaPredicted RBP31.12■■■□□ 2.57
LHX3-201ENST00000371746 CEP170BQ9Y4F5 1589 aaPredicted RBP31.1■■■□□ 2.57
LHX3-201ENST00000371746 NKTRP30414 1462 aaKnown RBP31.1■■■□□ 2.57
LHX3-201ENST00000371746 POLKQ9UBT6 870 aa31.09■■■□□ 2.57
LHX3-201ENST00000371746 ADGRB2O60241 1585 aa31.09■■■□□ 2.57
LHX3-201ENST00000371746 PNPLA6Q8IY17 1366 aa31.09■■■□□ 2.57
LHX3-201ENST00000371746 PHF23Q9BUL5 403 aaPredicted RBP31.08■■■□□ 2.57
LHX3-201ENST00000371746 C20orf194Q5TEA3 1177 aa31.07■■■□□ 2.56
LHX3-201ENST00000371746 DIAPH1O60610 1272 aaKnown RBP31.07■■■□□ 2.56
LHX3-201ENST00000371746 DNAJC5Q9H3Z4 198 aa31.05■■■□□ 2.56
LHX3-201ENST00000371746 PLEKHF1Q96S99 279 aa31.04■■■□□ 2.56
LHX3-201ENST00000371746 CRBNQ96SW2 442 aa31.04■■■□□ 2.56
LHX3-201ENST00000371746 PTCH1Q13635 1447 aa31.03■■■□□ 2.56
LHX3-201ENST00000371746 ZNF692Q9BU19 519 aaPredicted RBP31.03■■■□□ 2.56
LHX3-201ENST00000371746 EMILIN1Q9Y6C2 1016 aa31.03■■■□□ 2.56
LHX3-201ENST00000371746 MON2Q7Z3U7 1717 aa31.02■■■□□ 2.56
LHX3-201ENST00000371746 ACEP12821 1306 aa31.02■■■□□ 2.56
LHX3-201ENST00000371746 COG3Q96JB2 828 aa31.02■■■□□ 2.56
LHX3-201ENST00000371746 DIP2AQ14689 1571 aa31.01■■■□□ 2.55
LHX3-201ENST00000371746 CCDC27Q2M243 656 aa31■■■□□ 2.55
LHX3-201ENST00000371746 KCNA6P17658 529 aa30.99■■■□□ 2.55
LHX3-201ENST00000371746 ITSN1Q15811 1721 aa30.98■■■□□ 2.55
LHX3-201ENST00000371746 AKAP12Q02952 1782 aa30.98■■■□□ 2.55
LHX3-201ENST00000371746 PLEKHG3A1L390 1219 aa30.98■■■□□ 2.55
LHX3-201ENST00000371746 BCAR3O75815 825 aa30.98■■■□□ 2.55
LHX3-201ENST00000371746 WDR63Q8IWG1 891 aa30.98■■■□□ 2.55
LHX3-201ENST00000371746 RBM19Q9Y4C8 960 aaKnown RBP30.97■■■□□ 2.55
LHX3-201ENST00000371746 MAPK8IP3Q9UPT6 1336 aa30.97■■■□□ 2.55
LHX3-201ENST00000371746 RRS1Q15050 365 aaKnown RBP30.96■■■□□ 2.55
LHX3-201ENST00000371746 TOPAZ1Q8N9V7 1692 aa30.96■■■□□ 2.55
LHX3-201ENST00000371746 ADAMTSL3P82987 1691 aa30.95■■■□□ 2.54
LHX3-201ENST00000371746 TTC21BQ7Z4L5 1316 aa30.95■■■□□ 2.54
LHX3-201ENST00000371746 TMPOP42166 694 aaKnown RBP30.95■■■□□ 2.54
LHX3-201ENST00000371746 PMFBP1Q8TBY8 1022 aa30.94■■■□□ 2.54
LHX3-201ENST00000371746 ANKLE2Q86XL3 938 aa30.94■■■□□ 2.54
LHX3-201ENST00000371746 MAP2P11137 1827 aaKnown RBP30.93■■■□□ 2.54
LHX3-201ENST00000371746 XRN1Q8IZH2 1706 aaKnown RBP30.93■■■□□ 2.54
LHX3-201ENST00000371746 AATKQ6ZMQ8 1374 aa30.93■■■□□ 2.54
LHX3-201ENST00000371746 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.93■■■□□ 2.54
LHX3-201ENST00000371746 USP6P35125 1406 aa30.92■■■□□ 2.54
LHX3-201ENST00000371746 NCBP3Q53F19 620 aaKnown RBP30.91■■■□□ 2.54
LHX3-201ENST00000371746 TRIM35Q9UPQ4 493 aa30.89■■■□□ 2.54
LHX3-201ENST00000371746 FCHSD2O94868 740 aa30.88■■■□□ 2.53
LHX3-201ENST00000371746 HMOX1P09601 288 aa30.88■■■□□ 2.53
LHX3-201ENST00000371746 CDK12Q9NYV4 1490 aaPredicted RBP30.88■■■□□ 2.53
LHX3-201ENST00000371746 NRKQ7Z2Y5 1582 aa30.88■■■□□ 2.53
LHX3-201ENST00000371746 PRKAR2BP31323 418 aa30.88■■■□□ 2.53
LHX3-201ENST00000371746 RSPH6AQ9H0K4 717 aa30.88■■■□□ 2.53
LHX3-201ENST00000371746 LRRC7Q96NW7 1537 aa30.88■■■□□ 2.53
LHX3-201ENST00000371746 PIK3R4Q99570 1358 aa30.88■■■□□ 2.53
LHX3-201ENST00000371746 IL13P35225 146 aa30.87■■■□□ 2.53
LHX3-201ENST00000371746 RIPK4P57078 832 aa30.86■■■□□ 2.53
LHX3-201ENST00000371746 MYH16Q9H6N6 1097 aa30.86■■■□□ 2.53
LHX3-201ENST00000371746 PNNQ9H307 717 aaKnown RBP30.85■■■□□ 2.53
LHX3-201ENST00000371746 ZNF142P52746 1687 aaPredicted RBP30.85■■■□□ 2.53
LHX3-201ENST00000371746 NGDNQ8NEJ9 315 aaKnown RBP30.84■■■□□ 2.53
LHX3-201ENST00000371746 OVOS2A0A0J9YW53 1432 aa30.83■■■□□ 2.53
LHX3-201ENST00000371746 OVOS2Q6IE36 1432 aa30.83■■■□□ 2.53
LHX3-201ENST00000371746 TSR2Q969E8 191 aaKnown RBP30.83■■■□□ 2.53
LHX3-201ENST00000371746 RBM33Q96EV2 1170 aaKnown RBP30.83■■■□□ 2.53
LHX3-201ENST00000371746 SSH2Q76I76 1423 aa30.82■■■□□ 2.52
LHX3-201ENST00000371746 PHACTR3Q96KR7 559 aa30.82■■■□□ 2.52
LHX3-201ENST00000371746 SOX12O15370 315 aa30.81■■■□□ 2.52
LHX3-201ENST00000371746 RARSP54136 660 aaKnown RBP30.81■■■□□ 2.52
LHX3-201ENST00000371746 FANCIQ9NVI1 1328 aa30.8■■■□□ 2.52
LHX3-201ENST00000371746 RGPD8O14715 1765 aaPredicted RBP30.79■■■□□ 2.52
LHX3-201ENST00000371746 BCL2L13Q9BXK5 485 aa30.78■■■□□ 2.52
LHX3-201ENST00000371746 SETD1BQ9UPS6 1966 aaKnown RBP30.78■■■□□ 2.52
LHX3-201ENST00000371746 NEFMP07197 916 aa30.77■■■□□ 2.52
LHX3-201ENST00000371746 CANXP27824 592 aaKnown RBP30.76■■■□□ 2.52
LHX3-201ENST00000371746 FRAT1Q92837 279 aaPredicted RBP30.76■■■□□ 2.52
LHX3-201ENST00000371746 ANKARQ7Z5J8 1434 aa30.74■■■□□ 2.51
LHX3-201ENST00000371746 TTC21AQ8NDW8 1320 aa30.74■■■□□ 2.51
LHX3-201ENST00000371746 USP31Q70CQ4 1352 aa30.72■■■□□ 2.51
LHX3-201ENST00000371746 EXOSC9Q06265 439 aaKnown RBP30.71■■■□□ 2.51
LHX3-201ENST00000371746 EIF4A2Q14240 407 aaKnown RBP30.71■■■□□ 2.51
LHX3-201ENST00000371746 NFE2L2Q16236 605 aa30.71■■■□□ 2.51
LHX3-201ENST00000371746 PANK1Q8TE04 598 aa30.71■■■□□ 2.51
LHX3-201ENST00000371746 IL16Q14005 1332 aa30.71■■■□□ 2.51
LHX3-201ENST00000371746 CHD2O14647 1828 aaKnown RBP30.7■■■□□ 2.51
LHX3-201ENST00000371746 HSP90AB2PQ58FF8 381 aa30.7■■■□□ 2.51
LHX3-201ENST00000371746 PDE3AQ14432 1141 aa30.69■■■□□ 2.5
LHX3-201ENST00000371746 NPHP4O75161 1426 aaPredicted RBP30.69■■■□□ 2.5
LHX3-201ENST00000371746 THUMPD2Q9BTF0 503 aaKnown RBP30.68■■■□□ 2.5
LHX3-201ENST00000371746 NALCNQ8IZF0 1738 aa30.68■■■□□ 2.5
LHX3-201ENST00000371746 FMN2Q9NZ56 1722 aa30.68■■■□□ 2.5
LHX3-201ENST00000371746 AEBP1Q8IUX7 1158 aa30.67■■■□□ 2.5
LHX3-201ENST00000371746 SKAP1Q86WV1 359 aa30.66■■■□□ 2.5
LHX3-201ENST00000371746 TNNQ9UQP3 1299 aa30.66■■■□□ 2.5
LHX3-201ENST00000371746 COG6Q9Y2V7 657 aa30.66■■■□□ 2.5
LHX3-201ENST00000371746 MAP3K19Q56UN5 1328 aa30.66■■■□□ 2.5
LHX3-201ENST00000371746 NUTM2GQ5VZR2 741 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms