RNA–Protein interactions for RNA: ENST00000371601.4

NPDC1-202, Transcript of neural proliferation, differentiation and control 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPDC1, Length 1,494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-202ENST00000371601 ZNF692Q9BU19 519 aaPredicted RBP28.79■■■□□ 2.2
NPDC1-202ENST00000371601 QTRT2Q9H974 415 aaKnown RBP28.78■■■□□ 2.2
NPDC1-202ENST00000371601 USP21Q9UK80 565 aa28.78■■■□□ 2.2
NPDC1-202ENST00000371601 ITSN1Q15811 1721 aa28.78■■■□□ 2.2
NPDC1-202ENST00000371601 TMF1P82094 1093 aa28.78■■■□□ 2.2
NPDC1-202ENST00000371601 SLC12A5Q9H2X9 1139 aa28.77■■■□□ 2.2
NPDC1-202ENST00000371601 FNBP4Q8N3X1 1017 aaPredicted RBP28.75■■■□□ 2.19
NPDC1-202ENST00000371601 COL22A1Q8NFW1 1626 aaPredicted RBP28.75■■■□□ 2.19
NPDC1-202ENST00000371601 PUS7Q96PZ0 661 aaKnown RBP28.74■■■□□ 2.19
NPDC1-202ENST00000371601 RXRBP28702 533 aa28.73■■■□□ 2.19
NPDC1-202ENST00000371601 NLRP13Q86W25 1043 aa28.72■■■□□ 2.19
NPDC1-202ENST00000371601 TOPAZ1Q8N9V7 1692 aa28.71■■■□□ 2.19
NPDC1-202ENST00000371601 FAM83GA6ND36 823 aa28.71■■■□□ 2.19
NPDC1-202ENST00000371601 EIF4G2P78344 907 aaKnown RBP eCLIP28.71■■■□□ 2.19
NPDC1-202ENST00000371601 HDGFL2Q7Z4V5 671 aaPredicted RBP28.71■■■□□ 2.19
NPDC1-202ENST00000371601 NLRP6P59044 892 aa28.7■■■□□ 2.18
NPDC1-202ENST00000371601 USP6P35125 1406 aa28.69■■■□□ 2.18
NPDC1-202ENST00000371601 CDCA8Q53HL2 280 aa28.68■■■□□ 2.18
NPDC1-202ENST00000371601 TERF2IPQ9NYB0 399 aa28.68■■■□□ 2.18
NPDC1-202ENST00000371601 TRPM3Q9HCF6 1732 aaPredicted RBP28.68■■■□□ 2.18
NPDC1-202ENST00000371601 KTN1Q86UP2 1357 aaKnown RBP28.68■■■□□ 2.18
NPDC1-202ENST00000371601 ZC3H6P61129 1189 aaKnown RBP28.67■■■□□ 2.18
NPDC1-202ENST00000371601 TRPC5Q9UL62 973 aaPredicted RBP28.67■■■□□ 2.18
NPDC1-202ENST00000371601 BRD4O60885 1362 aaPredicted RBP28.67■■■□□ 2.18
NPDC1-202ENST00000371601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.66■■■□□ 2.18
NPDC1-202ENST00000371601 TTC21BQ7Z4L5 1316 aa28.66■■■□□ 2.18
NPDC1-202ENST00000371601 HSPA5P11021 654 aaKnown RBP28.66■■■□□ 2.18
NPDC1-202ENST00000371601 SOCS7O14512 581 aa28.65■■■□□ 2.18
NPDC1-202ENST00000371601 RBM6P78332 1123 aaKnown RBP28.65■■■□□ 2.18
NPDC1-202ENST00000371601 UNC5CLQ8IV45 518 aa28.65■■■□□ 2.18
NPDC1-202ENST00000371601 PRDM11Q9NQV5 511 aa28.64■■■□□ 2.17
NPDC1-202ENST00000371601 POLR3GLQ9BT43 218 aa28.63■■■□□ 2.17
NPDC1-202ENST00000371601 CPSF1Q10570 1443 aaKnown RBP28.62■■■□□ 2.17
NPDC1-202ENST00000371601 ALS2Q96Q42 1657 aa28.62■■■□□ 2.17
NPDC1-202ENST00000371601 GCP02774 474 aa28.61■■■□□ 2.17
NPDC1-202ENST00000371601 BTG4Q9NY30 223 aa28.61■■■□□ 2.17
NPDC1-202ENST00000371601 CHRNA2Q15822 529 aa28.6■■■□□ 2.17
NPDC1-202ENST00000371601 CCDC9Q9Y3X0 531 aaKnown RBP28.6■■■□□ 2.17
NPDC1-202ENST00000371601 TTC21AQ8NDW8 1320 aa28.6■■■□□ 2.17
NPDC1-202ENST00000371601 ZBTB7CA1YPR0 619 aa28.59■■■□□ 2.17
NPDC1-202ENST00000371601 BCL9LQ86UU0 1499 aa28.59■■■□□ 2.17
NPDC1-202ENST00000371601 SSH2Q76I76 1423 aa28.59■■■□□ 2.17
NPDC1-202ENST00000371601 KIAA0232Q92628 1395 aa28.57■■■□□ 2.16
NPDC1-202ENST00000371601 SOX12O15370 315 aa28.57■■■□□ 2.16
NPDC1-202ENST00000371601 GJD4Q96KN9 370 aaPredicted RBP28.56■■■□□ 2.16
NPDC1-202ENST00000371601 ZRANB1Q9UGI0 708 aa28.55■■■□□ 2.16
NPDC1-202ENST00000371601 NINLQ9Y2I6 1382 aa28.55■■■□□ 2.16
NPDC1-202ENST00000371601 USP19O94966 1318 aa28.55■■■□□ 2.16
NPDC1-202ENST00000371601 A0A1W2PP64 1363 aa28.54■■■□□ 2.16
NPDC1-202ENST00000371601 NME9Q86XW9 330 aa28.54■■■□□ 2.16
NPDC1-202ENST00000371601 SLIT2O94813 1529 aa28.54■■■□□ 2.16
NPDC1-202ENST00000371601 CD163L1Q9NR16 1453 aa28.53■■■□□ 2.16
NPDC1-202ENST00000371601 EVA1CP58658 441 aa28.53■■■□□ 2.16
NPDC1-202ENST00000371601 ATRNO75882 1429 aa28.52■■■□□ 2.16
NPDC1-202ENST00000371601 VPS72Q15906 364 aa28.51■■■□□ 2.15
NPDC1-202ENST00000371601 KCNH5Q8NCM2 988 aa28.51■■■□□ 2.15
NPDC1-202ENST00000371601 STRN4Q9NRL3 753 aa28.5■■■□□ 2.15
NPDC1-202ENST00000371601 MARF1Q9Y4F3 1742 aaKnown RBP28.49■■■□□ 2.15
NPDC1-202ENST00000371601 EDC4Q6P2E9 1401 aaKnown RBP28.48■■■□□ 2.15
NPDC1-202ENST00000371601 ANKRD36BQ8N2N9 1353 aa28.46■■■□□ 2.15
NPDC1-202ENST00000371601 ABCA3Q99758 1704 aa28.46■■■□□ 2.15
NPDC1-202ENST00000371601 AKAP12Q02952 1782 aa28.44■■■□□ 2.14
NPDC1-202ENST00000371601 CPDO75976 1380 aa28.44■■■□□ 2.14
NPDC1-202ENST00000371601 A0A0G2JS52 829 aa28.41■■■□□ 2.14
NPDC1-202ENST00000371601 C11orf95C9JLR9 678 aaPredicted RBP28.41■■■□□ 2.14
NPDC1-202ENST00000371601 MYT1Q01538 1121 aa28.41■■■□□ 2.14
NPDC1-202ENST00000371601 COG3Q96JB2 828 aa28.41■■■□□ 2.14
NPDC1-202ENST00000371601 USP31Q70CQ4 1352 aa28.41■■■□□ 2.14
NPDC1-202ENST00000371601 ARHGEF25Q86VW2 580 aa28.4■■■□□ 2.14
NPDC1-202ENST00000371601 USP35Q9P2H5 1018 aa28.4■■■□□ 2.14
NPDC1-202ENST00000371601 PIK3C2AO00443 1686 aa28.4■■■□□ 2.14
NPDC1-202ENST00000371601 CARD14Q9BXL6 1004 aa28.4■■■□□ 2.14
NPDC1-202ENST00000371601 COL14A1Q05707 1796 aaKnown RBP28.39■■■□□ 2.14
NPDC1-202ENST00000371601 CDK12Q9NYV4 1490 aaPredicted RBP28.39■■■□□ 2.14
NPDC1-202ENST00000371601 PHRF1Q9P1Y6 1649 aaKnown RBP28.39■■■□□ 2.14
NPDC1-202ENST00000371601 RGS12O14924 1447 aa28.38■■■□□ 2.13
NPDC1-202ENST00000371601 CRYBG1Q9Y4K1 1723 aa28.38■■■□□ 2.13
NPDC1-202ENST00000371601 FAM98CQ17RN3 349 aaKnown RBP28.38■■■□□ 2.13
NPDC1-202ENST00000371601 FYB1O15117 783 aa28.37■■■□□ 2.13
NPDC1-202ENST00000371601 LARP1Q6PKG0 1096 aaKnown RBP28.37■■■□□ 2.13
NPDC1-202ENST00000371601 SEPT12Q8IYM1 358 aa28.37■■■□□ 2.13
NPDC1-202ENST00000371601 GGNBP2Q9H3C7 697 aa28.37■■■□□ 2.13
NPDC1-202ENST00000371601 SPATA31A5Q5VU36 1347 aa28.36■■■□□ 2.13
NPDC1-202ENST00000371601 SPATA31A7Q8IWB4 1347 aa28.36■■■□□ 2.13
NPDC1-202ENST00000371601 NRKQ7Z2Y5 1582 aa28.36■■■□□ 2.13
NPDC1-202ENST00000371601 MON2Q7Z3U7 1717 aa28.36■■■□□ 2.13
NPDC1-202ENST00000371601 AXIN2Q9Y2T1 843 aa28.36■■■□□ 2.13
NPDC1-202ENST00000371601 PLCH1Q4KWH8 1693 aa28.35■■■□□ 2.13
NPDC1-202ENST00000371601 SLIT3O75094 1523 aa28.35■■■□□ 2.13
NPDC1-202ENST00000371601 AATKQ6ZMQ8 1374 aa28.35■■■□□ 2.13
NPDC1-202ENST00000371601 NWD2Q9ULI1 1742 aa28.34■■■□□ 2.13
NPDC1-202ENST00000371601 PANK3Q9H999 370 aa28.34■■■□□ 2.13
NPDC1-202ENST00000371601 ONECUT3O60422 494 aaPredicted RBP28.33■■■□□ 2.13
NPDC1-202ENST00000371601 SPATA31A1Q5TZJ5 1347 aa28.32■■■□□ 2.12
NPDC1-202ENST00000371601 CAMTA1Q9Y6Y1 1673 aa28.32■■■□□ 2.12
NPDC1-202ENST00000371601 FBLN1P23142 703 aa28.32■■■□□ 2.12
NPDC1-202ENST00000371601 CSB-PGBD3P0DP91 1061 aa28.31■■■□□ 2.12
NPDC1-202ENST00000371601 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.3■■■□□ 2.12
NPDC1-202ENST00000371601 TOM1L2Q6ZVM7 507 aa28.3■■■□□ 2.12
NPDC1-202ENST00000371601 NSD3Q9BZ95 1437 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms