RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 ANKRD24Q8TF21 1146 aa9.28□□□□□ -0.92
USP1-202ENST00000371146 BCORL1Q5H9F3 1711 aa9.28□□□□□ -0.92
USP1-202ENST00000371146 INO80Q9ULG1 1556 aaPredicted RBP9.28□□□□□ -0.92
USP1-202ENST00000371146 LRPPRCP42704 1394 aaKnown RBP9.27□□□□□ -0.92
USP1-202ENST00000371146 CLSPNQ9HAW4 1339 aa9.27□□□□□ -0.93
USP1-202ENST00000371146 DDB1Q16531 1140 aa9.27□□□□□ -0.93
USP1-202ENST00000371146 C1orf141Q5JVX7 400 aa9.27□□□□□ -0.93
USP1-202ENST00000371146 DEFB132Q7Z7B7 95 aa9.27□□□□□ -0.93
USP1-202ENST00000371146 STAC3Q96MF2 364 aa9.27□□□□□ -0.93
USP1-202ENST00000371146 MIS18AQ9NYP9 233 aa9.27□□□□□ -0.93
USP1-202ENST00000371146 ZMYM4Q5VZL5 1548 aa9.27□□□□□ -0.93
USP1-202ENST00000371146 PHF14O94880 888 aa9.26□□□□□ -0.93
USP1-202ENST00000371146 EIF2S2P20042 333 aaKnown RBP9.26□□□□□ -0.93
USP1-202ENST00000371146 AGLP35573 1532 aa9.26□□□□□ -0.93
USP1-202ENST00000371146 WASHC2AQ641Q2 1341 aa9.26□□□□□ -0.93
USP1-202ENST00000371146 KIAA0232Q92628 1395 aa9.26□□□□□ -0.93
USP1-202ENST00000371146 ADGRL3Q9HAR2 1447 aa9.26□□□□□ -0.93
USP1-202ENST00000371146 PTPRUQ92729 1446 aa9.25□□□□□ -0.93
USP1-202ENST00000371146 FYB1O15117 783 aa9.25□□□□□ -0.93
USP1-202ENST00000371146 APBA3O96018 575 aa9.25□□□□□ -0.93
USP1-202ENST00000371146 DCTN1Q14203 1278 aa9.25□□□□□ -0.93
USP1-202ENST00000371146 POTEAQ6S8J7 498 aa9.25□□□□□ -0.93
USP1-202ENST00000371146 SEPT12Q8IYM1 358 aa9.25□□□□□ -0.93
USP1-202ENST00000371146 RPRD2Q5VT52 1461 aaKnown RBP9.25□□□□□ -0.93
USP1-202ENST00000371146 TATP17735 454 aaPredicted RBP9.25□□□□□ -0.93
USP1-202ENST00000371146 CANXP27824 592 aaKnown RBP9.25□□□□□ -0.93
USP1-202ENST00000371146 TEFQ10587 303 aa9.25□□□□□ -0.93
USP1-202ENST00000371146 THUMPD2Q9BTF0 503 aaKnown RBP9.25□□□□□ -0.93
USP1-202ENST00000371146 ADGBQ8N7X0 1667 aa9.24□□□□□ -0.93
USP1-202ENST00000371146 RTL5Q5HYW3 569 aaPredicted RBP9.24□□□□□ -0.93
USP1-202ENST00000371146 DIAPH1O60610 1272 aaKnown RBP9.24□□□□□ -0.93
USP1-202ENST00000371146 ZNF530Q6P9A1 599 aaPredicted RBP9.24□□□□□ -0.93
USP1-202ENST00000371146 BICDL1Q6ZP65 573 aa9.24□□□□□ -0.93
USP1-202ENST00000371146 TRPC5Q9UL62 973 aaPredicted RBP9.24□□□□□ -0.93
USP1-202ENST00000371146 ARHGAP31Q2M1Z3 1444 aa9.24□□□□□ -0.93
USP1-202ENST00000371146 PIK3C2BO00750 1634 aa9.23□□□□□ -0.93
USP1-202ENST00000371146 PIP4K2AP48426 406 aaPredicted RBP9.23□□□□□ -0.93
USP1-202ENST00000371146 AEBP1Q8IUX7 1158 aa9.23□□□□□ -0.93
USP1-202ENST00000371146 CARD14Q9BXL6 1004 aa9.23□□□□□ -0.93
USP1-202ENST00000371146 KCNH5Q8NCM2 988 aa9.23□□□□□ -0.93
USP1-202ENST00000371146 ABCC11Q96J66 1382 aa9.23□□□□□ -0.93
USP1-202ENST00000371146 ADAMTS13Q76LX8 1427 aa9.23□□□□□ -0.93
USP1-202ENST00000371146 NSD3Q9BZ95 1437 aa9.23□□□□□ -0.93
USP1-202ENST00000371146 FGD1P98174 961 aa9.23□□□□□ -0.93
USP1-202ENST00000371146 TSHZ2Q9NRE2 1034 aa9.23□□□□□ -0.93
USP1-202ENST00000371146 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.23□□□□□ -0.93
USP1-202ENST00000371146 C3P01024 1663 aa9.22□□□□□ -0.93
USP1-202ENST00000371146 ZNF772Q68DY9 489 aaPredicted RBP9.22□□□□□ -0.93
USP1-202ENST00000371146 ILDR2Q71H61 639 aa9.22□□□□□ -0.93
USP1-202ENST00000371146 SIGLEC1Q9BZZ2 1709 aa9.22□□□□□ -0.93
USP1-202ENST00000371146 AXIN2Q9Y2T1 843 aa9.22□□□□□ -0.93
USP1-202ENST00000371146 PRAG1Q86YV5 1406 aa9.22□□□□□ -0.93
USP1-202ENST00000371146 GTF2E1P29083 439 aaPredicted RBP9.22□□□□□ -0.93
USP1-202ENST00000371146 SMIM5Q71RC9 77 aa9.22□□□□□ -0.93
USP1-202ENST00000371146 TESK2Q96S53 571 aa9.22□□□□□ -0.93
USP1-202ENST00000371146 ATAD2Q6PL18 1390 aa9.21□□□□□ -0.93
USP1-202ENST00000371146 PRKAR2BP31323 418 aa9.21□□□□□ -0.93
USP1-202ENST00000371146 ZNF219Q9P2Y4 722 aaPredicted RBP9.21□□□□□ -0.93
USP1-202ENST00000371146 MAP3K19Q56UN5 1328 aa9.21□□□□□ -0.94
USP1-202ENST00000371146 EN1Q05925 392 aaPredicted RBP9.21□□□□□ -0.94
USP1-202ENST00000371146 AIMP1Q12904 312 aaKnown RBP9.21□□□□□ -0.94
USP1-202ENST00000371146 SLC39A6Q13433 755 aa9.2□□□□□ -0.94
USP1-202ENST00000371146 SPATA31E1Q6ZUB1 1445 aa9.2□□□□□ -0.94
USP1-202ENST00000371146 SPATA31A3Q5VYP0 1347 aa9.2□□□□□ -0.94
USP1-202ENST00000371146 PRIM1P49642 420 aaKnown RBP9.19□□□□□ -0.94
USP1-202ENST00000371146 JCADQ9P266 1359 aa9.19□□□□□ -0.94
USP1-202ENST00000371146 RNF17Q9BXT8 1623 aaKnown RBP9.19□□□□□ -0.94
USP1-202ENST00000371146 PTPRTO14522 1441 aa9.19□□□□□ -0.94
USP1-202ENST00000371146 TAF7LQ5H9L4 462 aa9.19□□□□□ -0.94
USP1-202ENST00000371146 TTC5Q8N0Z6 440 aa9.19□□□□□ -0.94
USP1-202ENST00000371146 CABP4P57796 275 aa9.19□□□□□ -0.94
USP1-202ENST00000371146 KRT27Q7Z3Y8 459 aa9.19□□□□□ -0.94
USP1-202ENST00000371146 UNC5CLQ8IV45 518 aa9.19□□□□□ -0.94
USP1-202ENST00000371146 CLTCL1P53675 1640 aa9.18□□□□□ -0.94
USP1-202ENST00000371146 APAF1O14727 1248 aa9.18□□□□□ -0.94
USP1-202ENST00000371146 MCM10Q7L590 875 aa9.18□□□□□ -0.94
USP1-202ENST00000371146 GJD4Q96KN9 370 aaPredicted RBP9.18□□□□□ -0.94
USP1-202ENST00000371146 BCL2L13Q9BXK5 485 aa9.18□□□□□ -0.94
USP1-202ENST00000371146 PLXNC1O60486 1568 aa9.18□□□□□ -0.94
USP1-202ENST00000371146 MSL1Q68DK7 614 aa9.18□□□□□ -0.94
USP1-202ENST00000371146 CCDC136Q96JN2 1154 aa9.18□□□□□ -0.94
USP1-202ENST00000371146 A0A1W2PP64 1363 aa9.18□□□□□ -0.94
USP1-202ENST00000371146 KCNQ2O43526 872 aa9.18□□□□□ -0.94
USP1-202ENST00000371146 CCDC184Q52MB2 194 aa9.18□□□□□ -0.94
USP1-202ENST00000371146 NBPF6Q5VWK0 638 aa9.18□□□□□ -0.94
USP1-202ENST00000371146 NBPF4Q96M43 638 aa9.18□□□□□ -0.94
USP1-202ENST00000371146 E9PCH4 1651 aa9.17□□□□□ -0.94
USP1-202ENST00000371146 RBM6P78332 1123 aaKnown RBP9.17□□□□□ -0.94
USP1-202ENST00000371146 IRX6P78412 446 aaPredicted RBP9.17□□□□□ -0.94
USP1-202ENST00000371146 TCP11L2Q8N4U5 519 aa9.17□□□□□ -0.94
USP1-202ENST00000371146 C1orf167Q5SNV9 1468 aa9.17□□□□□ -0.94
USP1-202ENST00000371146 CCDC24Q8N4L8 307 aa9.17□□□□□ -0.94
USP1-202ENST00000371146 ATF5Q9Y2D1 282 aaPredicted RBP9.17□□□□□ -0.94
USP1-202ENST00000371146 SYNMO15061 1565 aa9.17□□□□□ -0.94
USP1-202ENST00000371146 FRAT1Q92837 279 aaPredicted RBP9.17□□□□□ -0.94
USP1-202ENST00000371146 TFCP2L1Q9NZI6 479 aa9.16□□□□□ -0.94
USP1-202ENST00000371146 IL2RBP14784 551 aa9.16□□□□□ -0.94
USP1-202ENST00000371146 RIPK4P57078 832 aa9.16□□□□□ -0.94
USP1-202ENST00000371146 ZCRB1Q8TBF4 217 aaKnown RBP9.16□□□□□ -0.94
USP1-202ENST00000371146 CCDC7Q96M83 1385 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms