RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 CLSTN1O94985 981 aa15.15■□□□□ 0.02
GPC4-201ENST00000370828 SMARCA2P51531 1590 aa15.15■□□□□ 0.02
GPC4-201ENST00000370828 HSP90AB3PQ58FF7 597 aa15.15■□□□□ 0.02
GPC4-201ENST00000370828 CPLX1O14810 134 aa15.15■□□□□ 0.02
GPC4-201ENST00000370828 MCM5P33992 734 aa15.15■□□□□ 0.02
GPC4-201ENST00000370828 BAG4O95429 457 aaKnown RBP15.14■□□□□ 0.01
GPC4-201ENST00000370828 ZNF330Q9Y3S2 320 aaPredicted RBP15.14■□□□□ 0.01
GPC4-201ENST00000370828 C16orf45Q96MC5 204 aaPredicted RBP15.14■□□□□ 0.01
GPC4-201ENST00000370828 EFCAB2Q5VUJ9 269 aa15.14■□□□□ 0.01
GPC4-201ENST00000370828 LTV1Q96GA3 475 aaPredicted RBP15.13■□□□□ 0.01
GPC4-201ENST00000370828 PCMTD1Q96MG8 357 aaPredicted RBP15.13■□□□□ 0.01
GPC4-201ENST00000370828 ZNF830Q96NB3 372 aaPredicted RBP15.13■□□□□ 0.01
GPC4-201ENST00000370828 GGNBP2Q9H3C7 697 aa15.13■□□□□ 0.01
GPC4-201ENST00000370828 EVC2Q86UK5 1308 aa15.13■□□□□ 0.01
GPC4-201ENST00000370828 OFD1O75665 1012 aa15.13■□□□□ 0.01
GPC4-201ENST00000370828 IGF1RP08069 1367 aa15.13■□□□□ 0.01
GPC4-201ENST00000370828 GTF2F1P35269 517 aaKnown RBP eCLIP15.13■□□□□ 0.01
GPC4-201ENST00000370828 KLHL40Q2TBA0 621 aa15.13■□□□□ 0.01
GPC4-201ENST00000370828 GTF2A1P52655 376 aaPredicted RBP15.13■□□□□ 0.01
GPC4-201ENST00000370828 ERCC4Q92889 916 aaPredicted RBP15.13■□□□□ 0.01
GPC4-201ENST00000370828 POLR3GO15318 223 aaPredicted RBP15.12■□□□□ 0.01
GPC4-201ENST00000370828 RSPH4AQ5TD94 716 aa15.12■□□□□ 0.01
GPC4-201ENST00000370828 GIMAP7Q8NHV1 300 aa15.12■□□□□ 0.01
GPC4-201ENST00000370828 CHMP4CQ96CF2 233 aa15.12■□□□□ 0.01
GPC4-201ENST00000370828 UBXN4Q92575 508 aa15.12■□□□□ 0.01
GPC4-201ENST00000370828 EIF2S2P20042 333 aaKnown RBP15.12■□□□□ 0.01
GPC4-201ENST00000370828 RBM28Q9NW13 759 aaKnown RBP15.12■□□□□ 0.01
GPC4-201ENST00000370828 SYNE3Q6ZMZ3 975 aa15.12■□□□□ 0.01
GPC4-201ENST00000370828 NCOA2Q15596 1464 aa15.12■□□□□ 0.01
GPC4-201ENST00000370828 HFM1A2PYH4 1435 aa15.11■□□□□ 0.01
GPC4-201ENST00000370828 TNNT1P13805 278 aa15.11■□□□□ 0.01
GPC4-201ENST00000370828 ZSCAN23Q3MJ62 389 aa15.11■□□□□ 0.01
GPC4-201ENST00000370828 NUTM2FA1L443 756 aa15.11■□□□□ 0.01
GPC4-201ENST00000370828 PDCP20941 246 aa15.11■□□□□ 0.01
GPC4-201ENST00000370828 PTPN14Q15678 1187 aa15.11■□□□□ 0.01
GPC4-201ENST00000370828 PRIMPOLQ96LW4 560 aa15.11■□□□□ 0.01
GPC4-201ENST00000370828 NUP62CLQ9H1M0 184 aa15.11■□□□□ 0.01
GPC4-201ENST00000370828 GDPD2Q9HCC8 539 aa15.11■□□□□ 0.01
GPC4-201ENST00000370828 KRT85P78386 507 aa15.11■□□□□ 0.01
GPC4-201ENST00000370828 DUSP27Q5VZP5 1158 aa15.11■□□□□ 0.01
GPC4-201ENST00000370828 TMCO3Q6UWJ1 677 aa15.11■□□□□ 0.01
GPC4-201ENST00000370828 CCP110O43303 1012 aa15.1■□□□□ 0.01
GPC4-201ENST00000370828 AMPHP49418 695 aa15.1■□□□□ 0.01
GPC4-201ENST00000370828 CAMK4Q16566 473 aa15.1■□□□□ 0.01
GPC4-201ENST00000370828 CPLX2Q6PUV4 134 aaKnown RBP15.1■□□□□ 0.01
GPC4-201ENST00000370828 TMEM57Q8N5G2 664 aa15.1■□□□□ 0.01
GPC4-201ENST00000370828 ANKRD20A12PQ8NF67 263 aa15.1■□□□□ 0.01
GPC4-201ENST00000370828 C9orf78Q9NZ63 289 aaPredicted RBP15.1■□□□□ 0.01
GPC4-201ENST00000370828 ADCY5O95622 1261 aa15.1■□□□□ 0.01
GPC4-201ENST00000370828 OLFM4Q6UX06 510 aa15.1■□□□□ 0.01
GPC4-201ENST00000370828 MINK1Q8N4C8 1332 aaPredicted RBP15.1■□□□□ 0.01
GPC4-201ENST00000370828 ZKSCAN5Q9Y2L8 839 aa15.09■□□□□ 0.01
GPC4-201ENST00000370828 CAGE1Q8TC20 777 aa15.09■□□□□ 0.01
GPC4-201ENST00000370828 TIGD1Q96MW7 591 aa15.09■□□□□ 0.01
GPC4-201ENST00000370828 CCDC94Q9BW85 323 aaPredicted RBP15.09■□□□□ 0.01
GPC4-201ENST00000370828 TRIM29Q14134 588 aa15.09■□□□□ 0.01
GPC4-201ENST00000370828 WDR63Q8IWG1 891 aa15.09■□□□□ 0.01
GPC4-201ENST00000370828 TDO2P48775 406 aa15.08■□□□□ 0.01
GPC4-201ENST00000370828 HOOK1Q9UJC3 728 aaKnown RBP15.08■□□□□ 0.01
GPC4-201ENST00000370828 RARSP54136 660 aaKnown RBP15.08■□□□□ 0
GPC4-201ENST00000370828 LARP1BQ659C4 914 aaKnown RBP15.08■□□□□ 0
GPC4-201ENST00000370828 ZNF622Q969S3 477 aaKnown RBP eCLIP15.07■□□□□ 0
GPC4-201ENST00000370828 GTPBP4Q9BZE4 634 aaKnown RBP15.07■□□□□ 0
GPC4-201ENST00000370828 UPF3BQ9BZI7 483 aaKnown RBP15.07■□□□□ 0
GPC4-201ENST00000370828 CCDC183Q5T5S1 534 aa15.07■□□□□ 0
GPC4-201ENST00000370828 SMAP1Q8IYB5 467 aaPredicted RBP15.07■□□□□ 0
GPC4-201ENST00000370828 NCOA1Q15788 1441 aa15.07■□□□□ 0
GPC4-201ENST00000370828 MLECQ14165 292 aa15.07■□□□□ 0
GPC4-201ENST00000370828 MAP3K11Q16584 847 aa15.07■□□□□ 0
GPC4-201ENST00000370828 CNTROBQ8N137 903 aa15.07■□□□□ 0
GPC4-201ENST00000370828 CCDC191Q8NCU4 936 aa15.07■□□□□ 0
GPC4-201ENST00000370828 FAM177BA6PVY3 158 aa15.07■□□□□ 0
GPC4-201ENST00000370828 SERPINC1P01008 464 aa15.07■□□□□ 0
GPC4-201ENST00000370828 NOLC1Q14978 699 aaKnown RBP eCLIP15.07■□□□□ 0
GPC4-201ENST00000370828 COG3Q96JB2 828 aa15.07■□□□□ 0
GPC4-201ENST00000370828 LRPPRCP42704 1394 aaKnown RBP15.07■□□□□ 0
GPC4-201ENST00000370828 PSMA5P28066 241 aa15.06■□□□□ 0
GPC4-201ENST00000370828 STK3Q13188 491 aa15.06■□□□□ 0
GPC4-201ENST00000370828 CCDC102AQ96A19 550 aa15.06■□□□□ 0
GPC4-201ENST00000370828 TRMT1Q9NXH9 659 aaKnown RBP15.06■□□□□ 0
GPC4-201ENST00000370828 CFTRP13569 1480 aa15.06■□□□□ 0
GPC4-201ENST00000370828 ANKRD50Q9ULJ7 1429 aa15.06■□□□□ 0
GPC4-201ENST00000370828 SURF6O75683 361 aaKnown RBP15.06■□□□□ 0
GPC4-201ENST00000370828 CT47B1P0C2W7 299 aaPredicted RBP15.06■□□□□ 0
GPC4-201ENST00000370828 TWISTNBQ3B726 338 aaPredicted RBP15.06■□□□□ 0
GPC4-201ENST00000370828 CARMIL2Q6F5E8 1435 aa15.06■□□□□ 0
GPC4-201ENST00000370828 SEC24BO95487 1268 aa15.06■□□□□ 0
GPC4-201ENST00000370828 KIF18AQ8NI77 898 aa15.06■□□□□ 0
GPC4-201ENST00000370828 CUX1P39880 1505 aa15.06■□□□□ 0
GPC4-201ENST00000370828 EIF3JO75822 258 aaKnown RBP15.06■□□□□ 0
GPC4-201ENST00000370828 CTR9Q6PD62 1173 aa15.05■□□□□ 0
GPC4-201ENST00000370828 FERMT3Q86UX7 667 aa15.05■□□□□ 0
GPC4-201ENST00000370828 SPATA32Q96LK8 384 aa15.05■□□□□ 0
GPC4-201ENST00000370828 NAP1L1P55209 391 aaKnown RBP15.05■□□□□ -0
GPC4-201ENST00000370828 MAP4K4O95819 1239 aaPredicted RBP15.04■□□□□ -0
GPC4-201ENST00000370828 G3BP1Q13283 466 aaKnown RBP eCLIP15.04■□□□□ -0
GPC4-201ENST00000370828 ZFP91Q96JP5 570 aaPredicted RBP15.04■□□□□ -0
GPC4-201ENST00000370828 NOL10Q9BSC4 688 aaKnown RBP15.04■□□□□ -0
GPC4-201ENST00000370828 ERLIN1O75477 346 aa15.04■□□□□ -0
GPC4-201ENST00000370828 AKAP17AQ02040 695 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms