RNA–Protein interactions for RNA: ENST00000370115.1

VCAM1-203, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene VCAM1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-203ENST00000370115 U2AF1L5P0DN76 240 aaPredicted RBP6.36□□□□□ -1.39
VCAM1-203ENST00000370115 KCNA4P22459 653 aa6.36□□□□□ -1.39
VCAM1-203ENST00000370115 U2AF1Q01081 240 aaKnown RBP eCLIP6.36□□□□□ -1.39
VCAM1-203ENST00000370115 ARHGAP31Q2M1Z3 1444 aa6.36□□□□□ -1.39
VCAM1-203ENST00000370115 TMEM131LA2VDJ0 1609 aa6.36□□□□□ -1.39
VCAM1-203ENST00000370115 NFKBIBQ15653 356 aa6.36□□□□□ -1.39
VCAM1-203ENST00000370115 STK26Q9P289 416 aa6.36□□□□□ -1.39
VCAM1-203ENST00000370115 DAXXQ9UER7 740 aaPredicted RBP6.36□□□□□ -1.39
VCAM1-203ENST00000370115 PCDHB15Q9Y5E8 787 aa6.36□□□□□ -1.39
VCAM1-203ENST00000370115 USP19O94966 1318 aa6.36□□□□□ -1.39
VCAM1-203ENST00000370115 ABCC11Q96J66 1382 aa6.35□□□□□ -1.39
VCAM1-203ENST00000370115 ARHGEF40Q8TER5 1519 aa6.35□□□□□ -1.39
VCAM1-203ENST00000370115 SEC24BO95487 1268 aa6.35□□□□□ -1.39
VCAM1-203ENST00000370115 SRPK2P78362 688 aaKnown RBP6.35□□□□□ -1.39
VCAM1-203ENST00000370115 GGNBP2Q9H3C7 697 aa6.35□□□□□ -1.39
VCAM1-203ENST00000370115 MAPK8IP3Q9UPT6 1336 aa6.35□□□□□ -1.39
VCAM1-203ENST00000370115 ZFYVE9O95405 1425 aa6.35□□□□□ -1.39
VCAM1-203ENST00000370115 PMFBP1Q8TBY8 1022 aa6.35□□□□□ -1.39
VCAM1-203ENST00000370115 PCDH10Q9P2E7 1040 aa6.35□□□□□ -1.39
VCAM1-203ENST00000370115 CLTCQ00610 1675 aaKnown RBP6.34□□□□□ -1.39
VCAM1-203ENST00000370115 NCBP3Q53F19 620 aaKnown RBP6.34□□□□□ -1.39
VCAM1-203ENST00000370115 PLEKHF1Q96S99 279 aa6.34□□□□□ -1.39
VCAM1-203ENST00000370115 MYH16Q9H6N6 1097 aa6.34□□□□□ -1.39
VCAM1-203ENST00000370115 SLC52A1Q9NWF4 448 aa6.34□□□□□ -1.39
VCAM1-203ENST00000370115 COL3A1P02461 1466 aaPredicted RBP6.34□□□□□ -1.39
VCAM1-203ENST00000370115 CD163L1Q9NR16 1453 aa6.34□□□□□ -1.39
VCAM1-203ENST00000370115 U2SURPO15042 1029 aaKnown RBP6.34□□□□□ -1.4
VCAM1-203ENST00000370115 TSR2Q969E8 191 aaKnown RBP6.34□□□□□ -1.4
VCAM1-203ENST00000370115 MINK1Q8N4C8 1332 aaPredicted RBP6.34□□□□□ -1.4
VCAM1-203ENST00000370115 KIF20BQ96Q89 1820 aa6.33□□□□□ -1.4
VCAM1-203ENST00000370115 NLRP1Q9C000 1473 aa6.33□□□□□ -1.4
VCAM1-203ENST00000370115 FYB1O15117 783 aa6.33□□□□□ -1.4
VCAM1-203ENST00000370115 AAMPQ13685 434 aa6.33□□□□□ -1.4
VCAM1-203ENST00000370115 PRAM1Q96QH2 718 aa6.33□□□□□ -1.4
VCAM1-203ENST00000370115 HSPA1LP34931 641 aa6.33□□□□□ -1.4
VCAM1-203ENST00000370115 TMPOP42166 694 aaKnown RBP6.33□□□□□ -1.4
VCAM1-203ENST00000370115 MVPQ14764 893 aaKnown RBP6.33□□□□□ -1.4
VCAM1-203ENST00000370115 TRIM35Q9UPQ4 493 aa6.33□□□□□ -1.4
VCAM1-203ENST00000370115 PDZRN3Q9UPQ7 1066 aa6.33□□□□□ -1.4
VCAM1-203ENST00000370115 FER1L4A9Z1Z3 1794 aa6.32□□□□□ -1.4
VCAM1-203ENST00000370115 YTHDC2Q9H6S0 1430 aaKnown RBP6.32□□□□□ -1.4
VCAM1-203ENST00000370115 ALKQ9UM73 1620 aa6.32□□□□□ -1.4
VCAM1-203ENST00000370115 EXOSC9Q06265 439 aaKnown RBP6.32□□□□□ -1.4
VCAM1-203ENST00000370115 ZKSCAN2Q63HK3 967 aa6.32□□□□□ -1.4
VCAM1-203ENST00000370115 ATAD2Q6PL18 1390 aa6.32□□□□□ -1.4
VCAM1-203ENST00000370115 MAP2P11137 1827 aaKnown RBP6.32□□□□□ -1.4
VCAM1-203ENST00000370115 FRAT2O75474 233 aaPredicted RBP6.32□□□□□ -1.4
VCAM1-203ENST00000370115 GSE1Q14687 1217 aa6.32□□□□□ -1.4
VCAM1-203ENST00000370115 FBXO31Q5XUX0 539 aaPredicted RBP6.32□□□□□ -1.4
VCAM1-203ENST00000370115 DZIP1LQ8IYY4 767 aaKnown RBP6.32□□□□□ -1.4
VCAM1-203ENST00000370115 RWDD1Q9H446 243 aaPredicted RBP6.32□□□□□ -1.4
VCAM1-203ENST00000370115 TERF2IPQ9NYB0 399 aa6.32□□□□□ -1.4
VCAM1-203ENST00000370115 POGKQ9P215 609 aa6.32□□□□□ -1.4
VCAM1-203ENST00000370115 MED14O60244 1454 aa6.31□□□□□ -1.4
VCAM1-203ENST00000370115 CT47B1P0C2W7 299 aaPredicted RBP6.31□□□□□ -1.4
VCAM1-203ENST00000370115 FTSJ3Q8IY81 847 aaKnown RBP6.31□□□□□ -1.4
VCAM1-203ENST00000370115 SMC4Q9NTJ3 1288 aa6.31□□□□□ -1.4
VCAM1-203ENST00000370115 TRIM27P14373 513 aa6.31□□□□□ -1.4
VCAM1-203ENST00000370115 IL27Q8NEV9 243 aa6.31□□□□□ -1.4
VCAM1-203ENST00000370115 SSH1Q8WYL5 1049 aa6.31□□□□□ -1.4
VCAM1-203ENST00000370115 CDK19Q9BWU1 502 aa6.31□□□□□ -1.4
VCAM1-203ENST00000370115 ZMYM3Q14202 1370 aa6.3□□□□□ -1.4
VCAM1-203ENST00000370115 PNPLA6Q8IY17 1366 aa6.3□□□□□ -1.4
VCAM1-203ENST00000370115 DIAPH1O60610 1272 aaKnown RBP6.3□□□□□ -1.4
VCAM1-203ENST00000370115 RIPK4P57078 832 aa6.3□□□□□ -1.4
VCAM1-203ENST00000370115 CABP1Q9NZU7 370 aa6.3□□□□□ -1.4
VCAM1-203ENST00000370115 LRRC7Q96NW7 1537 aa6.3□□□□□ -1.4
VCAM1-203ENST00000370115 FBLN1P23142 703 aa6.3□□□□□ -1.4
VCAM1-203ENST00000370115 HDGFL2Q7Z4V5 671 aaPredicted RBP6.3□□□□□ -1.4
VCAM1-203ENST00000370115 SETD1AO15047 1707 aaKnown RBP6.29□□□□□ -1.4
VCAM1-203ENST00000370115 IL16Q14005 1332 aa6.29□□□□□ -1.4
VCAM1-203ENST00000370115 ATF7IPQ6VMQ6 1270 aa6.29□□□□□ -1.4
VCAM1-203ENST00000370115 ITPRIPQ8IWB1 547 aa6.29□□□□□ -1.4
VCAM1-203ENST00000370115 TBC1D32Q96NH3 1257 aa6.29□□□□□ -1.4
VCAM1-203ENST00000370115 NOB1Q9ULX3 412 aaKnown RBP6.29□□□□□ -1.4
VCAM1-203ENST00000370115 SETD1BQ9UPS6 1966 aaKnown RBP6.29□□□□□ -1.4
VCAM1-203ENST00000370115 CDC42BPGQ6DT37 1551 aa6.29□□□□□ -1.4
VCAM1-203ENST00000370115 SLC34A2O95436 690 aa6.28□□□□□ -1.4
VCAM1-203ENST00000370115 STAG3Q9UJ98 1225 aa6.28□□□□□ -1.4
VCAM1-203ENST00000370115 DDX19BQ9UMR2 479 aa6.28□□□□□ -1.4
VCAM1-203ENST00000370115 BECN1Q14457 450 aa6.28□□□□□ -1.4
VCAM1-203ENST00000370115 WAPLQ7Z5K2 1190 aa6.28□□□□□ -1.4
VCAM1-203ENST00000370115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.28□□□□□ -1.4
VCAM1-203ENST00000370115 TMEM57Q8N5G2 664 aa6.28□□□□□ -1.4
VCAM1-203ENST00000370115 SLKQ9H2G2 1235 aaPredicted RBP6.28□□□□□ -1.4
VCAM1-203ENST00000370115 UPF2Q9HAU5 1272 aaKnown RBP6.28□□□□□ -1.4
VCAM1-203ENST00000370115 DLG5Q8TDM6 1919 aa6.28□□□□□ -1.4
VCAM1-203ENST00000370115 FCHSD2O94868 740 aa6.27□□□□□ -1.4
VCAM1-203ENST00000370115 HDAC1Q13547 482 aaPredicted RBP6.27□□□□□ -1.4
VCAM1-203ENST00000370115 PNNQ9H307 717 aaKnown RBP6.27□□□□□ -1.4
VCAM1-203ENST00000370115 POLKQ9UBT6 870 aa6.27□□□□□ -1.4
VCAM1-203ENST00000370115 FAM135BQ49AJ0 1406 aa6.27□□□□□ -1.41
VCAM1-203ENST00000370115 DLC1Q96QB1 1528 aa6.27□□□□□ -1.41
VCAM1-203ENST00000370115 A2ML1A8K2U0 1454 aa6.27□□□□□ -1.41
VCAM1-203ENST00000370115 PRKAR2BP31323 418 aa6.27□□□□□ -1.41
VCAM1-203ENST00000370115 MLECQ14165 292 aa6.27□□□□□ -1.41
VCAM1-203ENST00000370115 RSPH6AQ9H0K4 717 aa6.27□□□□□ -1.41
VCAM1-203ENST00000370115 ZBTB40Q9NUA8 1239 aa6.27□□□□□ -1.41
VCAM1-203ENST00000370115 KIF16BQ96L93 1317 aa6.27□□□□□ -1.41
VCAM1-203ENST00000370115 ATP7BP35670 1465 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms