RNA–Protein interactions for RNA: ENST00000369387.4

H3F3AP4-201, Transcript of H3 histone, family 3A, pseudogene 4, humanhuman

BASIC

Gene H3F3AP4, Length 411 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP4-201ENST00000369387 NGDNQ8NEJ9 315 aaKnown RBP12.77□□□□□ -0.37
H3F3AP4-201ENST00000369387 PMFBP1Q8TBY8 1022 aa12.77□□□□□ -0.37
H3F3AP4-201ENST00000369387 COG3Q96JB2 828 aa12.77□□□□□ -0.37
H3F3AP4-201ENST00000369387 TTC21AQ8NDW8 1320 aa12.77□□□□□ -0.37
H3F3AP4-201ENST00000369387 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
H3F3AP4-201ENST00000369387 SSH2Q76I76 1423 aa12.76□□□□□ -0.37
H3F3AP4-201ENST00000369387 AATKQ6ZMQ8 1374 aa12.75□□□□□ -0.37
H3F3AP4-201ENST00000369387 STRCQ7RTU9 1775 aa12.74□□□□□ -0.37
H3F3AP4-201ENST00000369387 COL3A1P02461 1466 aaPredicted RBP12.74□□□□□ -0.37
H3F3AP4-201ENST00000369387 SMG6Q86US8 1419 aaKnown RBP12.74□□□□□ -0.37
H3F3AP4-201ENST00000369387 NCOA3Q9Y6Q9 1424 aa12.74□□□□□ -0.37
H3F3AP4-201ENST00000369387 SENP3-EIF4A1A0A087X0R7 540 aa12.74□□□□□ -0.37
H3F3AP4-201ENST00000369387 ZRANB1Q9UGI0 708 aa12.74□□□□□ -0.37
H3F3AP4-201ENST00000369387 PHF8Q9UPP1 1060 aa12.74□□□□□ -0.37
H3F3AP4-201ENST00000369387 OVOS2A0A0J9YW53 1432 aa12.73□□□□□ -0.37
H3F3AP4-201ENST00000369387 OVOS2Q6IE36 1432 aa12.73□□□□□ -0.37
H3F3AP4-201ENST00000369387 PDE3BQ13370 1112 aa12.73□□□□□ -0.37
H3F3AP4-201ENST00000369387 NUDCQ9Y266 331 aa12.73□□□□□ -0.37
H3F3AP4-201ENST00000369387 STRCP1A6NGW2 1772 aa12.73□□□□□ -0.37
H3F3AP4-201ENST00000369387 PNPLA6Q8IY17 1366 aa12.72□□□□□ -0.37
H3F3AP4-201ENST00000369387 C19orf44Q9H6X5 657 aa12.72□□□□□ -0.37
H3F3AP4-201ENST00000369387 POLKQ9UBT6 870 aa12.72□□□□□ -0.37
H3F3AP4-201ENST00000369387 SALL2Q9Y467 1007 aaPredicted RBP12.72□□□□□ -0.37
H3F3AP4-201ENST00000369387 TMEM94Q12767 1356 aa12.71□□□□□ -0.37
H3F3AP4-201ENST00000369387 USP31Q70CQ4 1352 aa12.71□□□□□ -0.37
H3F3AP4-201ENST00000369387 CCDC146Q8IYE0 955 aa12.71□□□□□ -0.37
H3F3AP4-201ENST00000369387 NGEFQ8N5V2 710 aa12.71□□□□□ -0.37
H3F3AP4-201ENST00000369387 CDK12Q9NYV4 1490 aaPredicted RBP12.71□□□□□ -0.38
H3F3AP4-201ENST00000369387 DCCP43146 1447 aa12.71□□□□□ -0.38
H3F3AP4-201ENST00000369387 DIAPH1O60610 1272 aaKnown RBP12.7□□□□□ -0.38
H3F3AP4-201ENST00000369387 ESCO1Q5FWF5 840 aa12.7□□□□□ -0.38
H3F3AP4-201ENST00000369387 RUNDC1Q96C34 613 aa12.7□□□□□ -0.38
H3F3AP4-201ENST00000369387 MAP2P11137 1827 aaKnown RBP12.69□□□□□ -0.38
H3F3AP4-201ENST00000369387 U2AF1L5P0DN76 240 aaPredicted RBP12.69□□□□□ -0.38
H3F3AP4-201ENST00000369387 FBLN1P23142 703 aa12.69□□□□□ -0.38
H3F3AP4-201ENST00000369387 U2AF1Q01081 240 aaKnown RBP eCLIP12.69□□□□□ -0.38
H3F3AP4-201ENST00000369387 EMILIN1Q9Y6C2 1016 aa12.69□□□□□ -0.38
H3F3AP4-201ENST00000369387 PIK3C2AO00443 1686 aa12.69□□□□□ -0.38
H3F3AP4-201ENST00000369387 USP54Q70EL1 1684 aa12.69□□□□□ -0.38
H3F3AP4-201ENST00000369387 KIF1AQ12756 1690 aa12.68□□□□□ -0.38
H3F3AP4-201ENST00000369387 C1orf167Q5SNV9 1468 aa12.68□□□□□ -0.38
H3F3AP4-201ENST00000369387 APAF1O14727 1248 aa12.68□□□□□ -0.38
H3F3AP4-201ENST00000369387 U2SURPO15042 1029 aaKnown RBP12.68□□□□□ -0.38
H3F3AP4-201ENST00000369387 PPM1GO15355 546 aaPredicted RBP12.68□□□□□ -0.38
H3F3AP4-201ENST00000369387 NEFLP07196 543 aa12.68□□□□□ -0.38
H3F3AP4-201ENST00000369387 LRRC7Q96NW7 1537 aa12.67□□□□□ -0.38
H3F3AP4-201ENST00000369387 IQSEC2Q5JU85 1478 aa12.67□□□□□ -0.38
H3F3AP4-201ENST00000369387 ATF3P18847 181 aa12.67□□□□□ -0.38
H3F3AP4-201ENST00000369387 SUPT16HQ9Y5B9 1047 aaKnown RBP12.67□□□□□ -0.38
H3F3AP4-201ENST00000369387 MST1RQ04912 1400 aa12.66□□□□□ -0.38
H3F3AP4-201ENST00000369387 NLRP6P59044 892 aa12.66□□□□□ -0.38
H3F3AP4-201ENST00000369387 PSME1Q06323 249 aa12.66□□□□□ -0.38
H3F3AP4-201ENST00000369387 RRS1Q15050 365 aaKnown RBP12.66□□□□□ -0.38
H3F3AP4-201ENST00000369387 ORAI2Q96SN7 254 aa12.66□□□□□ -0.38
H3F3AP4-201ENST00000369387 PNNQ9H307 717 aaKnown RBP12.66□□□□□ -0.38
H3F3AP4-201ENST00000369387 MSH6P52701 1360 aa12.66□□□□□ -0.38
H3F3AP4-201ENST00000369387 ZNF521Q96K83 1311 aa12.65□□□□□ -0.38
H3F3AP4-201ENST00000369387 PAK3O75914 559 aaPredicted RBP12.65□□□□□ -0.38
H3F3AP4-201ENST00000369387 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
H3F3AP4-201ENST00000369387 DMRT2Q9Y5R5 561 aa12.65□□□□□ -0.38
H3F3AP4-201ENST00000369387 GOLGA2Q08379 1002 aa12.64□□□□□ -0.39
H3F3AP4-201ENST00000369387 NCBP3Q53F19 620 aaKnown RBP12.64□□□□□ -0.39
H3F3AP4-201ENST00000369387 TCP11L2Q8N4U5 519 aa12.64□□□□□ -0.39
H3F3AP4-201ENST00000369387 ABTB2Q8N961 1025 aa12.64□□□□□ -0.39
H3F3AP4-201ENST00000369387 MARF1Q9Y4F3 1742 aaKnown RBP12.64□□□□□ -0.39
H3F3AP4-201ENST00000369387 ZNF335Q9H4Z2 1342 aaPredicted RBP12.63□□□□□ -0.39
H3F3AP4-201ENST00000369387 XIRP1Q702N8 1843 aaKnown RBP12.63□□□□□ -0.39
H3F3AP4-201ENST00000369387 FCHSD2O94868 740 aa12.63□□□□□ -0.39
H3F3AP4-201ENST00000369387 IL13P35225 146 aa12.63□□□□□ -0.39
H3F3AP4-201ENST00000369387 CDCA7LQ96GN5 454 aa12.63□□□□□ -0.39
H3F3AP4-201ENST00000369387 MAPK8IP3Q9UPT6 1336 aa12.62□□□□□ -0.39
H3F3AP4-201ENST00000369387 PEAK1Q9H792 1746 aa12.62□□□□□ -0.39
H3F3AP4-201ENST00000369387 SBNO1A3KN83 1393 aa12.62□□□□□ -0.39
H3F3AP4-201ENST00000369387 SOX12O15370 315 aa12.62□□□□□ -0.39
H3F3AP4-201ENST00000369387 FOXO3O43524 673 aa12.62□□□□□ -0.39
H3F3AP4-201ENST00000369387 FKBP8Q14318 412 aa12.62□□□□□ -0.39
H3F3AP4-201ENST00000369387 PLEKHF1Q96S99 279 aa12.62□□□□□ -0.39
H3F3AP4-201ENST00000369387 MAP3K19Q56UN5 1328 aa12.62□□□□□ -0.39
H3F3AP4-201ENST00000369387 KIF24Q5T7B8 1368 aa12.61□□□□□ -0.39
H3F3AP4-201ENST00000369387 CCDC27Q2M243 656 aa12.61□□□□□ -0.39
H3F3AP4-201ENST00000369387 NUTM2GQ5VZR2 741 aa12.61□□□□□ -0.39
H3F3AP4-201ENST00000369387 KRT28Q7Z3Y7 464 aa12.61□□□□□ -0.39
H3F3AP4-201ENST00000369387 TRPM3Q9HCF6 1732 aaPredicted RBP12.61□□□□□ -0.39
H3F3AP4-201ENST00000369387 FLT4P35916 1363 aa12.6□□□□□ -0.39
H3F3AP4-201ENST00000369387 NEFMP07197 916 aa12.6□□□□□ -0.39
H3F3AP4-201ENST00000369387 SLFN5Q08AF3 891 aa12.6□□□□□ -0.39
H3F3AP4-201ENST00000369387 WWC1Q8IX03 1113 aa12.6□□□□□ -0.39
H3F3AP4-201ENST00000369387 RSPH6AQ9H0K4 717 aa12.6□□□□□ -0.39
H3F3AP4-201ENST00000369387 RRP7AQ9Y3A4 280 aaKnown RBP12.6□□□□□ -0.39
H3F3AP4-201ENST00000369387 E9PSI1 815 aa12.59□□□□□ -0.39
H3F3AP4-201ENST00000369387 AMPHP49418 695 aa12.59□□□□□ -0.39
H3F3AP4-201ENST00000369387 EIF4A2Q14240 407 aaKnown RBP12.59□□□□□ -0.39
H3F3AP4-201ENST00000369387 NEUROD2Q15784 382 aa12.59□□□□□ -0.39
H3F3AP4-201ENST00000369387 PHF23Q9BUL5 403 aaPredicted RBP12.59□□□□□ -0.39
H3F3AP4-201ENST00000369387 PRKAR2BP31323 418 aa12.58□□□□□ -0.4
H3F3AP4-201ENST00000369387 TMPOP42166 694 aaKnown RBP12.58□□□□□ -0.4
H3F3AP4-201ENST00000369387 XPCQ01831 940 aaPredicted RBP12.58□□□□□ -0.4
H3F3AP4-201ENST00000369387 HSP90AB2PQ58FF8 381 aa12.58□□□□□ -0.4
H3F3AP4-201ENST00000369387 DUSP27Q5VZP5 1158 aa12.58□□□□□ -0.4
H3F3AP4-201ENST00000369387 WDR63Q8IWG1 891 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms