RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 PAXIP1Q6ZW49 1069 aaPredicted RBP11.23□□□□□ -0.61
THBS3-201ENST00000368378 POGZQ7Z3K3 1410 aa11.23□□□□□ -0.61
THBS3-201ENST00000368378 POLR3AO14802 1390 aaPredicted RBP11.23□□□□□ -0.61
THBS3-201ENST00000368378 FOXD4L5Q5VV16 416 aaPredicted RBP11.22□□□□□ -0.61
THBS3-201ENST00000368378 ZKSCAN2Q63HK3 967 aa11.22□□□□□ -0.61
THBS3-201ENST00000368378 VSIG10Q8N0Z9 540 aa11.22□□□□□ -0.61
THBS3-201ENST00000368378 FOXD4L4Q8WXT5 416 aaPredicted RBP11.22□□□□□ -0.61
THBS3-201ENST00000368378 ZMYND15Q9H091 742 aa11.22□□□□□ -0.61
THBS3-201ENST00000368378 INO80Q9ULG1 1556 aaPredicted RBP11.22□□□□□ -0.61
THBS3-201ENST00000368378 TMEM57Q8N5G2 664 aa11.22□□□□□ -0.61
THBS3-201ENST00000368378 C14orf93Q9H972 538 aaKnown RBP11.22□□□□□ -0.61
THBS3-201ENST00000368378 TRIM27P14373 513 aa11.22□□□□□ -0.61
THBS3-201ENST00000368378 ANKRD45Q5TZF3 282 aa11.22□□□□□ -0.61
THBS3-201ENST00000368378 PMFBP1Q8TBY8 1022 aa11.22□□□□□ -0.61
THBS3-201ENST00000368378 C22orf23Q9BZE7 217 aa11.22□□□□□ -0.61
THBS3-201ENST00000368378 MLH3Q9UHC1 1453 aa11.22□□□□□ -0.61
THBS3-201ENST00000368378 NAP1L5Q96NT1 182 aaPredicted RBP11.21□□□□□ -0.61
THBS3-201ENST00000368378 PPRC1Q5VV67 1664 aaKnown RBP11.21□□□□□ -0.61
THBS3-201ENST00000368378 MYOM2P54296 1465 aa11.21□□□□□ -0.62
THBS3-201ENST00000368378 NCLP19338 710 aaKnown RBP11.21□□□□□ -0.62
THBS3-201ENST00000368378 DCTN1Q14203 1278 aa11.21□□□□□ -0.62
THBS3-201ENST00000368378 MROH1Q8NDA8 1641 aa11.21□□□□□ -0.62
THBS3-201ENST00000368378 EFCAB6Q5THR3 1501 aa11.21□□□□□ -0.62
THBS3-201ENST00000368378 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
THBS3-201ENST00000368378 NPATQ14207 1427 aa11.2□□□□□ -0.62
THBS3-201ENST00000368378 MYH16Q9H6N6 1097 aa11.2□□□□□ -0.62
THBS3-201ENST00000368378 VWDEQ8N2E2 1590 aa11.2□□□□□ -0.62
THBS3-201ENST00000368378 FOXD4L6Q3SYB3 417 aaPredicted RBP11.2□□□□□ -0.62
THBS3-201ENST00000368378 FOXD4L3Q6VB84 417 aaPredicted RBP11.2□□□□□ -0.62
THBS3-201ENST00000368378 KIAA1210Q9ULL0 1709 aa11.19□□□□□ -0.62
THBS3-201ENST00000368378 EVC2Q86UK5 1308 aa11.19□□□□□ -0.62
THBS3-201ENST00000368378 HSP90AB1P08238 724 aaKnown RBP11.19□□□□□ -0.62
THBS3-201ENST00000368378 AAMPQ13685 434 aa11.19□□□□□ -0.62
THBS3-201ENST00000368378 MVPQ14764 893 aaKnown RBP11.19□□□□□ -0.62
THBS3-201ENST00000368378 ARID3AQ99856 593 aa11.19□□□□□ -0.62
THBS3-201ENST00000368378 NOL8Q76FK4 1167 aaKnown RBP11.19□□□□□ -0.62
THBS3-201ENST00000368378 GLI2P10070 1586 aa11.18□□□□□ -0.62
THBS3-201ENST00000368378 NGEFQ8N5V2 710 aa11.18□□□□□ -0.62
THBS3-201ENST00000368378 PRAM1Q96QH2 718 aa11.18□□□□□ -0.62
THBS3-201ENST00000368378 KIDINS220Q9ULH0 1771 aa11.18□□□□□ -0.62
THBS3-201ENST00000368378 ATAD2Q6PL18 1390 aa11.18□□□□□ -0.62
THBS3-201ENST00000368378 ZRANB1Q9UGI0 708 aa11.18□□□□□ -0.62
THBS3-201ENST00000368378 NCKAP5LQ9HCH0 1330 aa11.18□□□□□ -0.62
THBS3-201ENST00000368378 BRD2P25440 801 aaKnown RBP11.18□□□□□ -0.62
THBS3-201ENST00000368378 HSCBQ8IWL3 235 aa11.18□□□□□ -0.62
THBS3-201ENST00000368378 ZNF428Q96B54 188 aa11.18□□□□□ -0.62
THBS3-201ENST00000368378 FAM83GA6ND36 823 aa11.17□□□□□ -0.62
THBS3-201ENST00000368378 WAPLQ7Z5K2 1190 aa11.17□□□□□ -0.62
THBS3-201ENST00000368378 CABP1Q9NZU7 370 aa11.17□□□□□ -0.62
THBS3-201ENST00000368378 QRICH2Q9H0J4 1663 aa11.17□□□□□ -0.62
THBS3-201ENST00000368378 PRKAR2BP31323 418 aa11.17□□□□□ -0.62
THBS3-201ENST00000368378 TMPOP42166 694 aaKnown RBP11.17□□□□□ -0.62
THBS3-201ENST00000368378 HSPA2P54652 639 aa11.16□□□□□ -0.62
THBS3-201ENST00000368378 WDR63Q8IWG1 891 aa11.16□□□□□ -0.62
THBS3-201ENST00000368378 RRAGDQ9NQL2 400 aaPredicted RBP11.16□□□□□ -0.62
THBS3-201ENST00000368378 GOLGA6L3A6NEY3 463 aa11.16□□□□□ -0.62
THBS3-201ENST00000368378 VGFO15240 615 aaPredicted RBP11.16□□□□□ -0.62
THBS3-201ENST00000368378 SBNO2Q9Y2G9 1366 aa11.16□□□□□ -0.62
THBS3-201ENST00000368378 IDI1Q13907 227 aa11.15□□□□□ -0.62
THBS3-201ENST00000368378 RRS1Q15050 365 aaKnown RBP11.15□□□□□ -0.62
THBS3-201ENST00000368378 TSPYL6Q8N831 410 aa11.15□□□□□ -0.62
THBS3-201ENST00000368378 NECTIN2Q92692 538 aa11.15□□□□□ -0.62
THBS3-201ENST00000368378 TBC1D32Q96NH3 1257 aa11.15□□□□□ -0.62
THBS3-201ENST00000368378 KRT24Q2M2I5 525 aa11.15□□□□□ -0.63
THBS3-201ENST00000368378 SHPRHQ149N8 1683 aa11.15□□□□□ -0.63
THBS3-201ENST00000368378 IFT172Q9UG01 1749 aa11.15□□□□□ -0.63
THBS3-201ENST00000368378 ADGRB3O60242 1522 aa11.14□□□□□ -0.63
THBS3-201ENST00000368378 ATF7IPQ6VMQ6 1270 aa11.14□□□□□ -0.63
THBS3-201ENST00000368378 TRAK2O60296 914 aa11.14□□□□□ -0.63
THBS3-201ENST00000368378 DTNBO60941 627 aa11.14□□□□□ -0.63
THBS3-201ENST00000368378 RBM10P98175 930 aaKnown RBP11.14□□□□□ -0.63
THBS3-201ENST00000368378 CHAMP1Q96JM3 812 aa11.14□□□□□ -0.63
THBS3-201ENST00000368378 HECW2Q9P2P5 1572 aa11.14□□□□□ -0.63
THBS3-201ENST00000368378 MIS18AQ9NYP9 233 aa11.13□□□□□ -0.63
THBS3-201ENST00000368378 EMILIN1Q9Y6C2 1016 aa11.13□□□□□ -0.63
THBS3-201ENST00000368378 NINLQ9Y2I6 1382 aa11.13□□□□□ -0.63
THBS3-201ENST00000368378 DIAPH1O60610 1272 aaKnown RBP11.13□□□□□ -0.63
THBS3-201ENST00000368378 XRCC6P12956 609 aaKnown RBP eCLIP11.13□□□□□ -0.63
THBS3-201ENST00000368378 PHACTR3Q96KR7 559 aa11.13□□□□□ -0.63
THBS3-201ENST00000368378 NRXN1Q9ULB1 1477 aa11.13□□□□□ -0.63
THBS3-201ENST00000368378 MCM4P33991 863 aa11.13□□□□□ -0.63
THBS3-201ENST00000368378 A0A1W2PP64 1363 aa11.12□□□□□ -0.63
THBS3-201ENST00000368378 ANKRD36BQ8N2N9 1353 aa11.12□□□□□ -0.63
THBS3-201ENST00000368378 SLC4A10Q6U841 1118 aa11.12□□□□□ -0.63
THBS3-201ENST00000368378 ADGRB1O14514 1584 aa11.12□□□□□ -0.63
THBS3-201ENST00000368378 CD2BP2O95400 341 aaKnown RBP11.11□□□□□ -0.63
THBS3-201ENST00000368378 C16orf71Q8IYS4 520 aaPredicted RBP11.11□□□□□ -0.63
THBS3-201ENST00000368378 MPNDQ8N594 471 aa11.11□□□□□ -0.63
THBS3-201ENST00000368378 TRIM35Q9UPQ4 493 aa11.11□□□□□ -0.63
THBS3-201ENST00000368378 PPLO60437 1756 aa11.11□□□□□ -0.63
THBS3-201ENST00000368378 FYB1O15117 783 aa11.11□□□□□ -0.63
THBS3-201ENST00000368378 TSHZ3Q63HK5 1081 aa11.11□□□□□ -0.63
THBS3-201ENST00000368378 FRMPD1Q5SYB0 1578 aa11.11□□□□□ -0.63
THBS3-201ENST00000368378 IQSEC2Q5JU85 1478 aa11.11□□□□□ -0.63
THBS3-201ENST00000368378 SMARCA5O60264 1052 aaPredicted RBP11.11□□□□□ -0.63
THBS3-201ENST00000368378 GLIPR1L2Q4G1C9 344 aa11.11□□□□□ -0.63
THBS3-201ENST00000368378 DDX19BQ9UMR2 479 aa11.11□□□□□ -0.63
THBS3-201ENST00000368378 MYO3AQ8NEV4 1616 aa11.11□□□□□ -0.63
THBS3-201ENST00000368378 LMTK2Q8IWU2 1503 aa11.1□□□□□ -0.63
THBS3-201ENST00000368378 RPGRIP1LQ68CZ1 1315 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms